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Thanks again for your support of MOB-Suite! It seems like threads are fixed to 1 for a bunch of functions in mob_recon.py...I'm wondering if there's a reason for this? We're hitting speed limitations of tblastn on large metagenomic assemblies. I'd even be happy to open a PR to set them to num_threads if it makes sense. Thanks!
Sam
The text was updated successfully, but these errors were encountered:
Hi,
Thanks again for your support of MOB-Suite! It seems like threads are fixed to 1 for a bunch of functions in mob_recon.py...I'm wondering if there's a reason for this? We're hitting speed limitations of
tblastn
on large metagenomic assemblies. I'd even be happy to open a PR to set them tonum_threads
if it makes sense. Thanks!Sam
The text was updated successfully, but these errors were encountered: