sa4ss_glossaries.tex

\newacronym{abc}{ABC}{Acceptable Biological Catch}
\newacronym{ace}{ACE}{Army Corp of Engineers}
\newacronym{acl}{ACL}{annual catch limit}
\newacronym{act}{ACT}{annual catch target}
\newacronym{adfg}{ADF\&G}{Alaska Department of Fish and Game}
\newacronym{admb}{ADMB}{AD Model Builder}
\newacronym{afa}{AFA}{American Fisheries Act}
\newacronym{afsc}{AFSC}{Alaska Fisheries Science Center}
\newacronym{aic}{AIC}{Akaike information criterion}
\newacronym{ais}{AIS}{Automatic Identification System}
\newacronym{akfin}{AKFIN}{Alaska Fisheries Information Network}
\newacronym{akro}{AKRO}{Alaska Regional Office}
\newacronym{am}{AM}{accountability measures}
\newacronym{apecs}{APECS}{Assessment Profile, Ecosystem Considerations, and Socioeconomics}
\newacronym{ashop}{ASHOP}{At-Sea Hake Observer Program}
\newacronym{asmfc}{ASMFC}{Atlantic States Marine Fisheries Commission}
\newacronym{bac}{BAC}{Block Area Closure}
\newacronym{bcca}{BCCA}{Bottom Contact Closed Area}
\newacronym{bcigfp}{Integrated Program}{British Columbia Integrated Groundfish Program}
\newacronym{bic}{BIC}{Bayesian information criterion}
\newacronym{bo}{BO}{Biological Opinion}
\newacronym{brd}{BRD}{bycatch reduction device}
\newacronym{bsai}{BS\slash AI}{Bering Sea\slash Aleutian Islands}
\newacronym{bsia}{BSIA}{best scientific information available}
\newacronym{btca}{BTCA}{Bottom Trawl Closed Area}
\newacronym{cands}{C\&S}{ceremonial and subsistence}
\newacronym{caal}{CAAL}{conditional age-at-length}
\newacronym{calcofi}{CalCOFI}{California Cooperative Oceanic Fisheries Investigations}
\newacronym{calpoly}{Cal Poly}{California Polytechnic State University}
\newacronym{cbnms}{CBNMS}{Cordell Bank National Marine Sanctuary}
\newacronym{calcom}{CalCOM}{CalCOM database for the California Cooperative Survey}
\newacronym{cca}{CCA}{Cowcod Conservation Area}
\newacronym{cce}{CCE}{California Current Ecosystem}
\newacronym{cdfw}{CDFW}{California Department of Fish and Wildlife}
\newacronym{cesu}{CESU}{Cooperative Ecosystem Studies Unit}
\newacronym{cinms}{CINMS}{Channel Islands National Marine Sanctuary}
\newacronym{cfmc}{CFMC}{Caribbean Fisheries Management Council}
\newacronym{cfr}{CFR}{Code of Federal Regulations}
\newacronym{ci}{CI}{Cooperative Institute}
\newacronym{cie}{CIE}{Center for Independent Experts}
\newacronym{cmsp}{CMSP}{Coastal and Marine Spatial Planning}
\newacronym{copc}{\href{http://www.opc.ca.gov/}{COPC}}{\href{http://www.opc.ca.gov/}{California Ocean Protection Council}}
\newacronym{covid}{COVID-19}{Coronavirus disease}
\newacronym{cp}{CP}{catcher-processor}
\newacronym{cpfv}{CPFV}{commercial passenger fishing vessel}
\newacronym{cps}{CPS}{coastal pelagic species}
\newacronym{cpue}{CPUE}{catch per unit effort}
\newacronym{crca}{CRCA}{California Rockfish Conservation Area}
\newacronym{crfs}{CRFS}{California Recreational Fisheries Survey}
\newacronym{csmp}{CSMP}{California Seafloor Mapping Program}
\newacronym{csp}{CSP}{Halibut Catch Sharing Plan}
\newacronym{csumb}{\href{http://seafloor.otterlabs.org/}{CSUMB}}{\href{http://seafloor.otterlabs.org/}{California State University at Monterey Bay Seafloor Mapping Lab}}
\newacronym{cv}{CV}{catcher vessel}
\newacronym{cwa}{CWA}{Clean Water Act}
\newacronym{czma}{CZMA}{Coastal Zone Management Act}
\newacronym{di}{D\&I}{Diversity and Inclusion}
\newacronym{dah}{DAH}{domestic annual harvest}
\newacronym{dap}{DAP}{domestic annual processing}
\newacronym{dfo}{DFO}{Fisheries and Oceans Canada}
\newacronym{doc}{DOC}{Department of Commerce}
\newacronym{doi}{DOI}{Department of Interior}
\newacronym{dscs}{DSCD}{deep sea coral and sponge}
\newacronym{dtl}{DTL}{daily trip limit}
\newacronym{dts}{DTS}{dover sole, thornyhead, and trawl-caught sablefish complex}
\newacronym{dw}{DW}{disk width}
\newacronym{eas}{EAS}{Ecosystem Advisory Subpanel}
\newacronym{ebm}{EBM}{ecosystem-based management}
\newacronym{ebfm}{EBFM}{ecosystem-based fisheries management}
\newacronym{ebs}{EBS}{Eastern Bering Sea}
\newacronym{ec}{EC}{ecosystem component}
\newacronym{eeop}{EEOP}{Equal Employment Opportunity Plan}
\newacronym{eez}{EEZ}{exclusive economic zone}
\newacronym{efh}{EFH}{essential fish habitat}
\newacronym{efhca}{EFHCA}{essential fish habitat conservation area}
\newacronym{efin}{EFIN}{Economic Fishery Information Network}
\newacronym{efp}{EFP}{exempted fishing permit}
\newacronym{eis}{EIS}{Environmental Impact Statement}
\newacronym{eli}{ELI}{Ecosystem Linkage Index}
\newacronym{em}{EM}{electronic monitoring}
\newacronym{emer}{EM\slash ER}{Electronic Monitoring\slash Electronic Reporting}
\newacronym{enso}{ENSO}{El Ni{\~n}o Southern Oscillation}
\newacronym{epp}{EPP}{Educational Partnership Program}
\newacronym{esa}{ESA}{Endangered Species Act}
\newacronym{esu}{ESU}{evolutionary significant unit}
\newacronym{fep}{FEP}{Fishery Ecosystem Plan}
\newacronym{fis}{FIS}{Fisheries Information System}
\newacronym{fl}{FL}{fork length}
\newacronym{fmp}{FMP}{Fishery Management Plan}
\newacronym{fmsy}{$F_{MSY}$}{fishing mortality at maximum sustainable yield}
\newacronym{fmu}{FMU}{Fishery Management Unit}
\newacronym{foia}{FOIA}{Freedom of Information Act}
\newacronym{fram}{FRAM}{Fishery Resource and Monitoring Division}
\newacronym{fssi}{FSSI}{Fish Stock Sustainability Index}
\newacronym{fws}{FWS}{U.S. Fish and Wildlife Service}
\newacronym{gap}{GAP}{Groundfish Advisory Subpanel}
\newacronym{garfo}{GARFO}{Greater Atlantic Regional Fisheries Office}
\newacronym{gca}{GCA}{Groundfish Conservation Area}
\newacronym{gdp}{GDP}{gross domestic product}
\newacronym{gemm}{GEMM}{Groundfish Expanded Mortality Multi-Year}
\newacronym{gfa}{GFA}{groundfish fishing area}
\newacronym{gfnms}{GFNMS}{Gulf of the Farallones National Marine Sanctuary}
\newacronym{gis}{GIS}{Geographic Information System}
\newacronym{glm}{GLM}{Generalized Linear Model}
\newacronym{gmfmc}{GMFMC}{Gulf of Mexico Fishery Management Council}
\newacronym{gmt}{GMT}{Groundfish Management Team}
\newacronym{goa}{GOA}{Gulf of Alaska}
\newacronym{gps}{GPS}{Global Positioning System}
\newacronym{gsmfc}{GSMFC}{Gulf States Marine Fisheries Commission}
\newacronym{haip}{HAIP}{Habitat Assessment Improvement Plan}
\newacronym{hapc}{HAPC}{Habitat Area of Particular Concern}
\newacronym{hcr}{HCR}{harvest control rule}
\newacronym{hg}{HG}{harvest guideline}
\newacronym{hms}{HMS}{highly migratory species}
\newacronym{hsp}{HSP}{habitat suitability probability}
\newacronym{hud}{HUD}{Habitat Use Database}
\newacronym{iattc}{IATTC}{Inter-American Tropical Tuna Commission}
\newacronym{ibq}{IBQ}{individual bycatch quota}
\newacronym{idfg}{IDFG}{Idaho Department of Fish and Game}
\newacronym{iea}{IEA}{Integrated Ecosystem Assessment}
\newacronym{ifq}{IFQ}{individual fishing quota}
\newacronym{inpfc}{INPFC}{International North Pacific Fishery Commission}
\newacronym{iphc}{IPHC}{International Pacific Halibut Commission}
\newacronym{iq}{IQ}{individual quota}
\newacronym{isw}{ISW}{interspiracular width}
\newacronym{itq}{ITQ}{individual transferable or tradeable quota}
\newacronym{iuu}{IUU}{illegal, unregulated, and unreported}
\newacronym{jv}{JV}{joint-venture}
\newacronym{jvp}{JVP}{joint-venture processing}
\newacronym{lapp}{LAPP}{Limited Access Privilege Program}
\newacronym{le}{LE}{limited entry}
\newacronym{lmrcsc}{LMRCSC}{Living Marine Resources Cooperative Science Center}
\newacronym{mafmc}{MAFMC}{Mid-Atlantic Fishery Management Council}
\newacronym{marmap}{MARMAP}{Marine Resource Monitoring and Assessment Program}
\newacronym{marpol}{MARPOL}{International Convention for the Prevention of Pollution from Ships}
\newacronym{mbnms}{MBNMS}{Monterey Bay National Marine Sanctuary}
\newacronym{mbta}{MBTA}{Migratory Bird Treaty Act}
\newacronym{mfmt}{MFMT}{maximum fishing mortality threshold}
\newacronym{mlr}{MLR}{minimum landing requirement}
\newacronym{mle}{MLE}{maximum likelihood estimation}
\newacronym{mlml}{\href{https://www.mlml.calstate.edu/}{MLML}}{\href{https://www.mlml.calstate.edu/}{Moss Landing Marine Laboratories}}
\newacronym{mlpa}{MLPA}{California Marine Life Protection Act}
\newacronym{mmpa}{MMPA}{Marine Mammal Protection Act}
\newacronym{moa}{MOA}{Memorandum of Agreement}
\newacronym{mou}{MOU}{Memorandum of Understanding}
\newacronym{mpa}{MPA}{Marine Protected Area}
\newacronym{mrfss}{MRFSS}{Marine Recreational Fisheries Statistics Survey}
\newacronym{mrep}{MREP}{Marine Resource Education Program}
\newacronym{mrip}{MRIP}{Marine Recreation Information Program}
\newacronym{ms}{MS}{mothership}
\newacronym{mse}{MSE}{management strategy evaluation}
\newacronym{msfcma}{MSFCMA}{Magnuson-Stevens Fishery Conservation and Management Act}
\newacronym{msi}{MSI}{Minority Serving Institution}
\newacronym{msra}{MSRA}{Magnuson-Stevens Fishery Conservation and Management Reauthorization Act of 2006}
\newacronym{msst}{MSST}{minimum stock size threshold}
\newacronym{msy}{\emph{MSY}}{maximum sustainable yield}
\newacronym{n-fish}{N-FISH}{National Marine Fisheries Service Diversity Intern Program}
\newacronym{na}{NA}{not available}
\newacronym{namss}{\href{https://walrus.wr.usgs.gov/namss/}{NAMSS}}{\href{https://walrus.wr.usgs.gov/namss/}{United States Geological Survey National Archive of Marine Seismic Surveys}}
\newacronym{ncss}{NCSS}{National Climate Science Strategy}
\newacronym{neamap}{NEAMAP}{Northeast Area Monitoring and Assessment Program}
\newacronym{nefmc}{NEFMC}{New England Fishery Management Council}
\newacronym{nefsc}{NEFSC}{Northeast Fisheries Science Center}
\newacronym{nepa}{NEPA}{National Environmental Policy Act}
\newacronym{ngsa}{NGSA}{Next Generation Stock Assessment}
\newacronym{nm}{nm}{nautical mile}
\newacronym{nmfs}{NMFS}{National Marine Fisheries Service}
\newacronym{nms}{NMS}{National Marine Sanctuary}
\newacronym{nmsa}{NMSA}{National Marine Sanctuaries Act}
\newacronym{noaa}{\href{https://www.noaa.gov/}{NOAA}}{\href{https://www.noaa.gov/}{National Oceanic \& Atmospheric Administration}}
\newacronym{noaagc}{NOAA GC}{National Oceanic \& Atmospheric Administration General Counsel}
\newacronym{noi}{NOI}{notice of intent}
\newacronym{norpac}{NORPAC}{North Pacific Database Program}
\newacronym{nos}{NOS}{National Ocean Service}
\newacronym{npfmc}{NPFMC}{North Pacific Fishery Management Council}
\newacronym{npoa}{NPOA}{National Plan of Action}
\newacronym{nrc}{NRC}{National Research Council}
\newacronym{nrcc}{NRCC}{Northeast Regional Coordinating Council}
\newacronym{nrdc}{NRDC}{Natural Resources Defense Council}
\newacronym{ns1}{NS1}{National Standard 1}
\newacronym{nsf}{NSF}{National Science Foundation}
\newacronym{nsg}{NSG}{National Standards guidelines}
\newacronym{nwfsc}{NWFSC}{Northwest Fisheries Science Center}
\newacronym{nwifc}{NWIFC}{Northwest Indian Fisheries Commission}
\newacronym{nwr}{NWR}{Northwest Region}
\newacronym{oa}{OA}{open access}
\newacronym{oaq}{OAQ}{Office of Aquaculture}
\newacronym{ocnms}{OCNMS}{Olympic Coast National Marine Sanctuary}
\newacronym{odfw}{ODFW}{Oregon Department of Fish and Wildlife}
\newacronym{ofl}{OFL}{overfishing limit}
\newacronym{opm}{OPM}{Office of Personnel  Management}
\newacronym{orbs}{ORBS}{Oregon Department of Fish and Wildlife Oregon Recreational Boat Survey}
\newacronym{osp}{OSP}{Washington Department of Fish and Wildlife Ocean Sampling Program}
\newacronym{oy}{OY}{optimum yield}
\newacronym{pacfin}{PacFIN}{Pacific Fisheries Information Network}
\newacronym{pbr}{PBR}{Potential Biological Removal}
\newacronym{pcffa}{PCFFA}{Pacific Coast Federation of Fishermen's Associations}
\newacronym{pcmsc}{\href{https://www.usgs.gov/centers/pcmsc}{PCMSC}}{\href{https://www.usgs.gov/centers/pcmsc}{Pacific Coastal and Marine Science Center}}
\newacronym{pdf}{PDF}{probability density function}
\newacronym{pdo}{PDO}{Pacific Decadal Oscillation}
\newacronym{pep}{PEP}{Woods Hole Partnership Education Program}
\newacronym{pfmc}{PFMC}{Pacific Fishery Management Council}
\newacronym{pifsc}{PIFSC}{Pacific Islands Fisheries Science Center}
\newacronym{piro}{PIRO}{Pacific Islands Regional Office}
\newacronym{pnw}{PNW}{Pacific Northwest}
\newacronym{pra}{PRA}{Paperwork Reduction Act}
\newacronym{prsaip}{PRSAIP}{Protected Resources Stock Assessment Improvement Plan}
\newacronym{psmfc}{PSMFC}{Pacific States Marine Fisheries Commission}
\newacronym{qaqc}{QA\slash QC}{Quality Assurance\slash Quality Control}
\newacronym{qp}{QP}{quota pounds}
\newacronym{qs}{QS}{quota shares}
\newacronym{quest}{QUEST}{Quantitative Ecology and Socioeconomics Training Program}
\newacronym{raq}{RAQ}{Regional Aquaculture Coordinator}
\newacronym{rca}{RCA}{Rockfish Conservation Area}
\newacronym{recfin}{RecFIN}{Recreational Fishery Information Network}
\newacronym{rer}{RER}{Recovery Exploitation Rate}
\newacronym{rfmo}{RFMO}{Regional Fishery Management Organization}
\newacronym{rir}{RIR}{Regulatory Impact Review}
\newacronym{rov}{ROV}{remote operated vehicle}
\newacronym{rtr}{RTR}{Research Training and Recruitment}
\newacronym{s-aslope}{Slope Survey}{Alaska Fisheries Science Center Slope Survey}
\newacronym{s-ccfrp}{\href{https://www.mlml.calstate.edu/ccfrp/}{CCFRP}}{\href{https://www.mlml.calstate.edu/ccfrp/}{California Collaborative Fisheries Research Program}}
\newacronym{s-nshelf}{NWFSC Shelf Survey}{Northwest Fisheries Science Center Shelf Survey}
\newacronym{s-nslope}{NWFSC Slope Survey}{Northwest Fisheries Science Center Slope Survey}
\newacronym{s-tri}{Triennial Survey}{Alaska Fisheries Science Center/Northwest Fisheries Science Center West Coast Triennial Shelf Survey}
\newacronym{s-wcgbt}{WCGBTS}{Northwest Fisheries Science Center West Coast Groundfish Bottom Trawl Survey}
\newacronym{s-hkl}{Hook and Line Survey}{Northwest Fisheries Science Center Hook and Line Survey}
\newacronym{safe}{SAFE}{Stock Assessment and Fishery Evaluation}
\newacronym{safmc}{SAFMC}{South Atlantic Fishery Management Council}
\newacronym{saip}{SAIP}{Stock Assessment Improvement Plan}
\newacronym{sam}{SAM}{State-Space Assessment Model}
\newacronym{sawsarc}{SAW\slash SARC}{Stock Assessment Workshop\slash Stock Assessment Review Committee}
\newacronym{sb}{SB}{spawning biomass}
\newacronym{ssb}{SB}{spawning biomass}
\newacronym{scaa}{SCAA}{Statistical Catch-at-Age Assessment}
\newacronym{sdc}{SDC}{status determination criteria}
\newacronym{sdmtmb}{\texttt{sdmTMB}}{\href{https://github.com/pbs-assess/sdmtmb}{Species Distribution Models with Template Model Builder}}
\newacronym{sebs}{SEBS}{Shore and Estuary Boat Survey, Oregon Department of Fish and Wildlife}
\newacronym{sec}{Secretary}{United States Secretary of Commerce}
\newacronym{sedar}{SEDAR}{Southeast Data, Assessment, and Review}
\newacronym{sefis}{SEFIS}{Southeast Fishery Independent Survey}
\newacronym{sefsc}{SEFSC}{Southeast Fisheries Science Center}
\newacronym{sero}{SERO}{Southeast Regional Office}
\newacronym{sfa}{SFA}{Sustainable Fisheries Act of 1996}
\newacronym{ses}{SES}{social--ecological system}
\newacronym{sia}{SIA}{Social Impact Analysis}
\newacronym{spr}{SPR}{spawning potential ratio}
\newacronym{ssc}{SSC}{Scientific and Statistical Committee}
\newacronym{sst}{SST}{sea-surface temperature}
\newacronym{star}{STAR}{Stock Assessment Review}
\newacronym{ss3}{SS3}{Stock Synthesis}
\newacronym{swfsc}{SWFSC}{Southwest Fisheries Science Center}
\newacronym{tac}{TAC}{total allowable catch}
\newacronym{tl}{TL}{total length}
\newacronym{tmb}{\href{https://kaskr.github.io/adcomp/index.html}{TMB}}{\href{https://kaskr.github.io/adcomp/index.html}{Template Model Builder}}
\newacronym{tnc}{TNC}{The Nature Conservancy}
\newacronym{tor}{ToR}{Terms of Reference}
\newacronym{ua}{U\&A}{usual and accustomed}
\newacronym{unols}{UNOLS}{University-National Oceanographic Laboratory System}
\newacronym{uscg}{USCG}{United States Coast Guard}
\newacronym{usfs}{USFS}{United States Forest Service}
\newacronym{usfws}{USFWS}{United States Fish and Wildlife Service}
\newacronym{usgs}{USGS}{United States Geological Survey}
\newacronym{vms}{VMS}{Vessel Monitoring System}
\newacronym{vast}{VAST}{vector autoregressive spatio-temporal}
\newacronym{wcgop}{WCGOP}{West Coast Groundfish Observer Program}
\newacronym{wcpfc}{WCPFC}{Western and Central Pacific Fisheries Commission}
\newacronym{wcr}{WCR}{West Coast Region}
\newacronym{wcspa}{WCSPA}{West Coast Seafood Processors Association}
\newacronym{wcvi}{WCVI}{West Coast Vancouver Island}
\newacronym{wdfw}{WDFW}{Washington Department of Fish and Wildlife}
\newacronym{wfmo}{WFMO}{Workforce Management Office}
\newacronym{wfoa}{WFOA}{Western Fishboat Owners Association}
\newacronym{wpfmc}{WPFMC}{Western Pacific Fishery Management Council}
\newacronym{wpsar}{WPSAR}{Western Pacific Stock Assessment Review}
\newacronym{yrca}{YRCA}{Yelloweye Rockfish Conservation Area}
\newacronym{yoy}{YOY}{young of the year}