From 64739c31e2e4c63efc4191a2aaa26c254d9ecdc5 Mon Sep 17 00:00:00 2001
From: sbalci <drserdarbalci@gmail.com>
Date: Sat, 29 Jun 2024 20:27:13 +0300
Subject: [PATCH] fixed links

---
 app.R          |  4 +++-
 generate_qmd.R | 20 +++++++++++++++++---
 2 files changed, 20 insertions(+), 4 deletions(-)

diff --git a/app.R b/app.R
index 01da210..fcae1fa 100644
--- a/app.R
+++ b/app.R
@@ -40,6 +40,7 @@ ui <- fluidPage(
       checkboxInput("diagnosis", "Diagnosis", value = TRUE),
       checkboxInput("use_youtube", "Use YouTube", value = FALSE),
       textInput("youtube_link", "YouTube Link", value = "youtube_link"),
+      checkboxInput("end_template", "End Template", value = FALSE),
       actionButton("generate", "Generate Code"),
       br(),
       downloadButton('downloadFile_qmd', 'Download qmd file'),
@@ -95,7 +96,8 @@ server <- function(input, output) {
       stain = stain,
       diagnosis = input$diagnosis,
       use_youtube = input$use_youtube,
-      youtube_link = input$youtube_link
+      youtube_link = input$youtube_link,
+      end_template = input$end_template
     )
   })
 
diff --git a/generate_qmd.R b/generate_qmd.R
index f08a350..7db6ab5 100644
--- a/generate_qmd.R
+++ b/generate_qmd.R
@@ -470,7 +470,8 @@ readme_text <- function(
     stain = c("HE1", "HE2"),
     diagnosis = FALSE,
     use_youtube = FALSE,
-    youtube_link = "youtube_link"
+    youtube_link = "youtube_link",
+    end_template = FALSE
 ) {
 
 
@@ -530,6 +531,7 @@ update html file heading:
 
 ## yaml string ----
 
+
 yaml_string <- paste0("
 ```yaml
 - stainname: {{template}}-{{stain}}
@@ -565,7 +567,7 @@ yaml_string <- paste0("
   screenshot: https://www.patolojiatlasi.com/screenshots/thumbnail_{{template}}-{{stain}}.png
   github: https:///github.com/pathologyatlas/{{template}}
   githubpage: https://pathologyatlas.github.io/{{template}}
-  youtube: https://www.youtube.com/watch?v={{youtube_link}}
+  youtube:" , ifelse(use_youtube, paste0("https://www.youtube.com/watch?v=", youtube_link), "''"), "
 ```
 "
 )
@@ -797,12 +799,24 @@ for (s in stain) {
 
 }
 
+if (!use_youtube) {
+  readme_text <- gsub(pattern = "youtube: https://www.youtube.com/watch\\?v=.+", replacement = "youtube: ''", x = readme_text, perl = TRUE)
+  }
+
 
 
 
 ## end render ----
 
-readme_text <- paste(readme_text, end_string, sep = "\n\n")
+
+
+if (end_template) {
+
+  readme_text <- paste(readme_text, end_string, sep = "\n\n")
+
+}
+
+
 
 
 readme_text <- gsub(pattern = "((<", replacement = "{{<", x = readme_text, fixed = TRUE)