From 156de15ac0db636e4b11cdbb5140f2c4c1123c51 Mon Sep 17 00:00:00 2001
From: Chen Zhang <zhangc@ornl.gov>
Date: Wed, 3 Jul 2024 18:04:00 +0000
Subject: [PATCH] add PyPI publishing actions

---
 .github/workflows/package.yml | 25 +++++++++++++++++++++++++
 pyproject.toml                |  2 ++
 tests/bm3dornl-data           |  2 +-
 3 files changed, 28 insertions(+), 1 deletion(-)

diff --git a/.github/workflows/package.yml b/.github/workflows/package.yml
index e2aaa65..52121b6 100644
--- a/.github/workflows/package.yml
+++ b/.github/workflows/package.yml
@@ -45,3 +45,28 @@ jobs:
           if [ "${IS_RC}" = "true" ]; then CONDA_LABEL="rc"; fi
           echo pushing ${{ github.ref }} with label $CONDA_LABEL
           anaconda upload --label $CONDA_LABEL conda.recipe/noarch/bm3dornl*.tar.bz2
+
+  pypi-publish:
+    name: upload release to PyPI
+    runs-on: ubuntu-latest
+    if: startsWith(github.ref, 'refs/tags/v')
+    permissions:
+      # IMPORTANT: this permission is mandatory for trusted publishing
+      id-token: write
+    steps:
+      - uses: actions/checkout@v3
+      - uses: conda-incubator/setup-miniconda@v2
+        with:
+          auto-update-conda: true
+          channels: conda-forge,defaults
+          mamba-version: "*"
+          environment-file: environment.yml
+          cache-environment-key: ${{ runner.os }}-env-${{ hashFiles('**/environment.yml') }}
+          cache-downloads-key: ${{ runner.os }}-downloads-${{ hashFiles('**/environment.yml') }}
+      - name: build pypi pacakge
+        run: |
+          # build the package
+          VERSION=$(versioningit .) python -m build
+      # retrieve your distributions here
+      - name: Publish package distributions to PyPI
+        uses: pypa/gh-action-pypi-publish@release/v1
diff --git a/pyproject.toml b/pyproject.toml
index c2fb1df..88bdf50 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -12,6 +12,7 @@ dependencies = [
 ]
 license = { text = "MIT" }
 keywords = ["BM3D", "image processing", "neutron imaging", "denoising", "CuPy", "Numba"]
+readme = "README.md"
 
 [project.urls]
 homepage = "https://github.com/neutrons/python_project_template/"
@@ -19,6 +20,7 @@ repository = "https://github.com/ornlneutronimaging/bm3dornl"
 documentation = "https://bm3dornl.readthedocs.io/en/latest/"
 issues = "https://github.com/ornlneutronimaging/bm3dornl/issues"
 
+
 [build-system]
 requires = [
   "setuptools >= 40.6.0",
diff --git a/tests/bm3dornl-data b/tests/bm3dornl-data
index 984b049..58e0193 160000
--- a/tests/bm3dornl-data
+++ b/tests/bm3dornl-data
@@ -1 +1 @@
-Subproject commit 984b049ff036496e02ed154b35139873abb3d445
+Subproject commit 58e0193028d7357ca3a87f7232d3fcde62ecc1f6