Repositories list

• react-2d-molecule

  Public
  A React component to display molecule structures in a 2D SVG

  TypeScript

  •0•1•1•10•Updated Mar 11, 2025Mar 11, 2025

• phylio

  Public
  Read, write, and manipulate phylogenetic trees

  typescriptpurescriptnexus+ 5phylogenetic-treesnewicknexmlphyloxmlnhx

  PureScript

  •

  MIT License

  •0•3•3•9•Updated Mar 10, 2025Mar 10, 2025

• phyd3-parser-compat

  Public
  A compatability library implementing PhyloXML parsing from the legacy version of PhyD3.

  phyloxml

  JavaScript

  •0•1•1•3•Updated Mar 10, 2025Mar 10, 2025

• introduction-github

  Public
  This is a Git & GitHub course material

  HTML

  •4•6•4•0•Updated Mar 7, 2025Mar 7, 2025

• intro_2_HPC

  Public
  Creative Commons Attribution 4.0 International

  •0•0•0•0•Updated Feb 28, 2025Feb 28, 2025

• containers-workshop

  Public
  Materials for the workshop on containers

  Python

  •

  Creative Commons Attribution 4.0 International

  •8•2•0•0•Updated Feb 28, 2025Feb 28, 2025

• mec-shiny-apps

  Public
  R

  •

  Apache License 2.0

  •0•1•0•0•Updated Feb 17, 2025Feb 17, 2025

• introduction-to-generative-ai

  Public
  Course repository for Strategic Use of Generative AI

  Creative Commons Attribution 4.0 International

  •0•4•1•0•Updated Jan 30, 2025Jan 30, 2025

• ai-coding-course

  Public
  Materials for the AI coding assistants workshop

  Haskell

  •

  Creative Commons Attribution 4.0 International

  •2•0•0•0•Updated Dec 13, 2024Dec 13, 2024

• nextflow-workshop

  Public
  Nextflow workshop materials November 2024

  Nextflow

  •

  Other

  •9•10•1•0•Updated Nov 21, 2024Nov 21, 2024

• template_4_shortActivity

  Public
  10•0•0•0•Updated Nov 12, 2024Nov 12, 2024

• material-liascript

  Public
  PostScript

  •1•2•1•0•Updated Nov 3, 2024Nov 3, 2024

• rdm-introductory-course

  Public
  0•1•1•0•Updated Oct 29, 2024Oct 29, 2024

• acinetobase-static

  Public
  Database of Acinetobacter strains, genotypes, and phenotypes.

  reacthaskellpurescript+ 2acinetobacternix

  HTML

  •

  GNU General Public License v3.0

  •0•0•2•0•Updated Oct 28, 2024Oct 28, 2024

• functional_analysis_training

  Public
  Jupyter Notebook

  •1•0•0•0•Updated Oct 28, 2024Oct 28, 2024

• gentle-hands-on-python

  Public
  Course materials for the 'Gentle hands-on introduction to Python programming'.

  Jupyter Notebook

  •

  Other

  •9•9•13•0•Updated Oct 15, 2024Oct 15, 2024

• brain-mosaic-course

  Public
  Creative Commons Attribution 4.0 International

  •0•0•0•0•Updated Oct 7, 2024Oct 7, 2024

• CAMEL

  Public
  The CAMEL platform, an online compendium of Adaptive Microbial Experiments in the Lab.

  HTML

  •

  GNU Affero General Public License v3.0

  •2•1•6•1•Updated Oct 1, 2024Oct 1, 2024

• protein-structure-analysis

  Public
  protein-structurechimeraxfoldseek+ 3mutagensisfoldxmutatex

  Shell

  •

  Creative Commons Attribution 4.0 International

  •0•0•0•0•Updated Sep 22, 2024Sep 22, 2024

• genAI-research-course

  Public
  0•1•0•0•Updated Sep 15, 2024Sep 15, 2024

• phyd3

  Public
  Phylogenetic tree viewer based on D3.js

  visualizationphylogenetic-treesd3js

  JavaScript

  •

  MIT License

  •18•56•10•0•Updated Aug 16, 2024Aug 16, 2024

• Initiation_GIMP_n_Inkscape

  Public
  Other

  •0•0•0•0•Updated Aug 14, 2024Aug 14, 2024

• jekyll-github-actions

  Public
  test jekyll github Bioschemas

  Ruby

  •0•0•0•0•Updated Jul 28, 2024Jul 28, 2024

• buzz

  Public archive
  A real-time quizz and Q&A platform for training

  Python

  •

  MIT License

  •0•1•10•10•Updated Jun 25, 2024Jun 25, 2024

• irefindex

  Public
  Data import for iRefIndex

  PLpgSQL

  •5•0•1•3•Updated Jun 19, 2024Jun 19, 2024

• irdata

  Public
  iRefIndex data processing library

  Python

  •

  GNU General Public License v3.0

  •0•1•1•5•Updated Mar 8, 2024Mar 8, 2024

• nc-shiny-apps

  Public
  R

  •0•1•0•0•Updated Mar 8, 2024Mar 8, 2024

• reveal-md-template

  Public template
  CSS

  •

  MIT License

  •0•0•0•1•Updated Dec 15, 2023Dec 15, 2023

• phyd3-example-app

  Public
  An example app demonstrating the use of PhyD3

  JavaScript

  •

  MIT License

  •1•0•0•1•Updated Dec 15, 2023Dec 15, 2023

• training-material

  Public
  VIB BITS training material

  JavaScript

  •

  Other

  •2•8•19•3•Updated Jul 22, 2023Jul 22, 2023