Add new DocIndexRetriever example (#405)

* Add DocIndexRetriever example Signed-off-by: Chendi.Xue <chendi.xue@intel.com> --------- Signed-off-by: Chendi.Xue <chendi.xue@intel.com> Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com> Co-authored-by: XuhuiRen <44249229+XuhuiRen@users.noreply.github.com>
opea-project · Aug 21, 2024 · 566cf93 · 566cf93
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diff --git a/DocIndexRetriever/README.md b/DocIndexRetriever/README.md
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+# DocRetriever Application
+
+DocRetriever are the most widely adopted use case for leveraging the different methodologies to match user query against a set of free-text records. DocRetriever is essential to RAG system, which bridges the knowledge gap by dynamically fetching relevant information from external sources, ensuring that responses generated remain factual and current. The core of this architecture are vector databases, which are instrumental in enabling efficient and semantic retrieval of information. These databases store data as vectors, allowing RAG to swiftly access the most pertinent documents or data points based on semantic similarity.
+
+## We provided DocRetriever with different deployment infra
+
+- [docker xeon version](docker/xeon/) => minimum endpoints, easy to setup
+- [docker gaudi version](docker/gaudi/) => with extra tei_gaudi endpoint, faster
diff --git a/DocIndexRetriever/docker/Dockerfile b/DocIndexRetriever/docker/Dockerfile
@@ -0,0 +1,30 @@
+# Copyright (C) 2024 Intel Corporation
+# SPDX-License-Identifier: Apache-2.0
+
+FROM python:3.11-slim
+
+COPY GenAIComps /home/user/GenAIComps
+
+RUN apt-get update -y && apt-get install -y --no-install-recommends --fix-missing \
+    libgl1-mesa-glx \
+    libjemalloc-dev \
+    vim \
+    git
+
+RUN useradd -m -s /bin/bash user && \
+    mkdir -p /home/user && \
+    chown -R user /home/user/
+
+WORKDIR /home/user/GenAIComps
+RUN pip install --no-cache-dir --upgrade pip && \
+    pip install --no-cache-dir -r /home/user/GenAIComps/requirements.txt
+
+COPY GenAIExamples/DocIndexRetriever/docker/retrieval_tool.py /home/user/retrieval_tool.py
+
+ENV PYTHONPATH=$PYTHONPATH:/home/user/GenAIComps
+
+USER user
+
+WORKDIR /home/user
+
+ENTRYPOINT ["python", "retrieval_tool.py"]
diff --git a/DocIndexRetriever/docker/README.md b/DocIndexRetriever/docker/README.md
@@ -0,0 +1,126 @@
+# DocRetriever Application
+
+DocRetriever are the most widely adopted use case for leveraging the different methodologies to match user query against a set of free-text records. DocRetriever is essential to RAG system, which bridges the knowledge gap by dynamically fetching relevant information from external sources, ensuring that responses generated remain factual and current. The core of this architecture are vector databases, which are instrumental in enabling efficient and semantic retrieval of information. These databases store data as vectors, allowing RAG to swiftly access the most pertinent documents or data points based on semantic similarity.
+
+### 1. Build Images for necessary microservices. (This step will not needed after docker image released)
+
+- Embedding TEI Image
+
+```bash
+git clone https://github.com/opea-project/GenAIComps.git
+cd GenAIComps
+docker build -t opea/embedding-tei:latest --build-arg https_proxy=$https_proxy --build-arg http_proxy=$http_proxy -f comps/embeddings/langchain/docker/Dockerfile .
+```
+
+- Retriever Vector store Image
+
+```bash
+docker build -t opea/retriever-redis:latest --build-arg https_proxy=$https_proxy --build-arg http_proxy=$http_proxy -f comps/retrievers/langchain/redis/docker/Dockerfile .
+```
+
+- Rerank TEI Image
+
+```bash
+docker build -t opea/reranking-tei:latest --build-arg https_proxy=$https_proxy --build-arg http_proxy=$http_proxy -f comps/reranks/tei/docker/Dockerfile .
+```
+
+- Dataprep Image
+
+```bash
+docker build -t opea/dataprep-on-ray-redis:latest --build-arg https_proxy=$https_proxy --build-arg http_proxy=$http_proxy -f comps/dataprep/redis/langchain_ray/docker/Dockerfile .
+```
+
+### 2. Build Images for MegaService
+
+```bash
+cd ..
+git clone https://github.com/opea-project/GenAIExamples.git
+docker build --no-cache -t opea/doc-index-retriever:latest --build-arg https_proxy=$https_proxy --build-arg http_proxy=$http_proxy -f GenAIExamples/DocIndexRetriever/docker/Dockerfile .
+```
+
+### 3. Start all the services Docker Containers
+
+```bash
+export host_ip="YOUR IP ADDR"
+export HUGGINGFACEHUB_API_TOKEN=${your_hf_api_token}
+export EMBEDDING_MODEL_ID="BAAI/bge-base-en-v1.5"
+export RERANK_MODEL_ID="BAAI/bge-reranker-base"
+export TEI_EMBEDDING_ENDPOINT="http://${host_ip}:8090"
+export TEI_RERANKING_ENDPOINT="http://${host_ip}:8808"
+export TGI_LLM_ENDPOINT="http://${host_ip}:8008"
+export REDIS_URL="redis://${host_ip}:6379"
+export INDEX_NAME="rag-redis"
+export MEGA_SERVICE_HOST_IP=${host_ip}
+export EMBEDDING_SERVICE_HOST_IP=${host_ip}
+export RETRIEVER_SERVICE_HOST_IP=${host_ip}
+export RERANK_SERVICE_HOST_IP=${host_ip}
+export LLM_SERVICE_HOST_IP=${host_ip}
+export BACKEND_SERVICE_ENDPOINT="http://${host_ip}:8000/v1/retrievaltool"
+export DATAPREP_SERVICE_ENDPOINT="http://${host_ip}:6007/v1/dataprep"
+export llm_hardware='xeon' #xeon, xpu, gaudi
+cd GenAIExamples/DocIndexRetriever/docker/${llm_hardware}/
+docker compose -f docker-compose.yaml up -d
+```
+
+### 3. Validation
+
+Add Knowledge Base via HTTP Links:
+
+```bash
+curl -X POST "http://${host_ip}:6007/v1/dataprep" \
+     -H "Content-Type: multipart/form-data" \
+     -F 'link_list=["https://opea.dev"]'
+
+# expected output
+{"status":200,"message":"Data preparation succeeded"}
+```
+
+Retrieval from KnowledgeBase
+
+```bash
+curl http://${host_ip}:8889/v1/retrievaltool -X POST -H "Content-Type: application/json" -d '{
+     "text": "Explain the OPEA project?"
+     }'
+
+# expected output
+{"id":"354e62c703caac8c547b3061433ec5e8","reranked_docs":[{"id":"06d5a5cefc06cf9a9e0b5fa74a9f233c","text":"Close SearchsearchMenu WikiNewsCommunity Daysx-twitter linkedin github searchStreamlining implementation of enterprise-grade Generative AIEfficiently integrate secure, performant, and cost-effective Generative AI workflows into business value.TODAYOPEA..."}],"initial_query":"Explain the OPEA project?"}
+```
+
+### 4. Trouble shooting
+
+1. check all containers are alive
+
+```bash
+# redis vector store
+docker container logs redis-vector-db
+# dataprep to redis microservice, input document files
+docker container logs dataprep-redis-server
+
+# embedding microservice
+curl http://${host_ip}:6000/v1/embeddings \
+  -X POST \
+  -d '{"text":"Explain the OPEA project"}' \
+  -H 'Content-Type: application/json' > query
+docker container logs embedding-tei-server
+
+# if you used tei-gaudi
+docker container logs tei-embedding-gaudi-server
+
+# retriever microservice, input embedding output docs
+curl http://${host_ip}:7000/v1/retrieval \
+  -X POST \
+  -d @query \
+  -H 'Content-Type: application/json' > rerank_query
+docker container logs retriever-redis-server
+
+
+# reranking microservice
+curl http://${host_ip}:8000/v1/reranking \
+  -X POST \
+  -d @rerank_query \
+  -H 'Content-Type: application/json' > output
+docker container logs reranking-tei-server
+
+# megaservice gateway
+docker container logs doc-index-retriever-server
+```
diff --git a/DocIndexRetriever/docker/gaudi/docker_compose.yaml b/DocIndexRetriever/docker/gaudi/docker_compose.yaml
@@ -0,0 +1,125 @@
+
+# Copyright (C) 2024 Intel Corporation
+# SPDX-License-Identifier: Apache-2.0
+
+version: "3.8"
+
+services:
+  redis-vector-db:
+    image: redis/redis-stack:7.2.0-v9
+    container_name: redis-vector-db
+    ports:
+      - "16379:6379"
+      - "8001:8001"
+  dataprep-redis-service:
+    image: opea/dataprep-on-ray-redis:latest
+    container_name: dataprep-redis-server
+    depends_on:
+      - redis-vector-db
+    ports:
+      - "6007:6007"
+    environment:
+      no_proxy: ${no_proxy}
+      http_proxy: ${http_proxy}
+      https_proxy: ${https_proxy}
+      REDIS_URL: ${REDIS_URL}
+      INDEX_NAME: ${INDEX_NAME}
+  tei-embedding-service:
+    image: ghcr.io/huggingface/tei-gaudi:latest
+    container_name: tei-embedding-gaudi-server
+    ports:
+      - "8090:80"
+    volumes:
+      - "./data:/data"
+    runtime: habana
+    cap_add:
+      - SYS_NICE
+    ipc: host
+    environment:
+      no_proxy: ${no_proxy}
+      http_proxy: ${http_proxy}
+      https_proxy: ${https_proxy}
+      HABANA_VISIBLE_DEVICES: all
+      OMPI_MCA_btl_vader_single_copy_mechanism: none
+      MAX_WARMUP_SEQUENCE_LENGTH: 512
+    command: --model-id ${EMBEDDING_MODEL_ID}
+  embedding:
+    image: opea/embedding-tei:latest
+    container_name: embedding-tei-server
+    ports:
+      - "6000:6000"
+    ipc: host
+    depends_on:
+      - tei-embedding-service
+    environment:
+      no_proxy: ${no_proxy}
+      http_proxy: ${http_proxy}
+      https_proxy: ${https_proxy}
+      TEI_EMBEDDING_ENDPOINT: ${TEI_EMBEDDING_ENDPOINT}
+      LANGCHAIN_API_KEY: ${LANGCHAIN_API_KEY}
+      LANGCHAIN_TRACING_V2: ${LANGCHAIN_TRACING_V2}
+      LANGCHAIN_PROJECT: "opea-embedding-service"
+    restart: unless-stopped
+  retriever:
+    image: opea/retriever-redis:latest
+    container_name: retriever-redis-server
+    depends_on:
+      - redis-vector-db
+    ports:
+      - "7000:7000"
+    ipc: host
+    environment:
+      no_proxy: ${no_proxy}
+      http_proxy: ${http_proxy}
+      https_proxy: ${https_proxy}
+      REDIS_URL: ${REDIS_URL}
+      INDEX_NAME: ${INDEX_NAME}
+      LANGCHAIN_API_KEY: ${LANGCHAIN_API_KEY}
+      LANGCHAIN_TRACING_V2: ${LANGCHAIN_TRACING_V2}
+      LANGCHAIN_PROJECT: "opea-retriever-service"
+    restart: unless-stopped
+  reranking:
+    image: opea/reranking-tei:latest
+    container_name: reranking-tei-server
+    ports:
+      - "18000:8000"
+    ipc: host
+    entrypoint: python local_reranking.py
+    environment:
+      no_proxy: ${no_proxy}
+      http_proxy: ${http_proxy}
+      https_proxy: ${https_proxy}
+      TEI_RERANKING_ENDPOINT: ${TEI_RERANKING_ENDPOINT}
+      HUGGINGFACEHUB_API_TOKEN: ${HUGGINGFACEHUB_API_TOKEN}
+      HF_HUB_DISABLE_PROGRESS_BARS: 1
+      HF_HUB_ENABLE_HF_TRANSFER: 0
+      LANGCHAIN_API_KEY: ${LANGCHAIN_API_KEY}
+      LANGCHAIN_TRACING_V2: ${LANGCHAIN_TRACING_V2}
+      LANGCHAIN_PROJECT: "opea-reranking-service"
+    restart: unless-stopped
+  doc-index-retriever-server:
+    image: opea/doc-index-retriever:latest
+    container_name: doc-index-retriever-server
+    depends_on:
+      - redis-vector-db
+      - tei-embedding-service
+      - embedding
+      - retriever
+      - reranking
+    ports:
+      - "8889:8889"
+    environment:
+      - no_proxy=${no_proxy}
+      - https_proxy=${https_proxy}
+      - http_proxy=${http_proxy}
+      - MEGA_SERVICE_HOST_IP=${MEGA_SERVICE_HOST_IP}
+      - EMBEDDING_SERVICE_HOST_IP=${EMBEDDING_SERVICE_HOST_IP}
+      - RETRIEVER_SERVICE_HOST_IP=${RETRIEVER_SERVICE_HOST_IP}
+      - RERANK_SERVICE_HOST_IP=${RERANK_SERVICE_HOST_IP}
+      - LLM_SERVICE_HOST_IP=${LLM_SERVICE_HOST_IP}
+    ipc: host
+    restart: always
+
+networks:
+  default:
+    driver: bridge
diff --git a/DocIndexRetriever/docker/retrieval_tool.py b/DocIndexRetriever/docker/retrieval_tool.py
@@ -0,0 +1,59 @@
+# Copyright (C) 2024 Intel Corporation
+# SPDX-License-Identifier: Apache-2.0
+
+import asyncio
+import os
+
+from comps import MicroService, RetrievalToolGateway, ServiceOrchestrator, ServiceType
+
+MEGA_SERVICE_HOST_IP = os.getenv("MEGA_SERVICE_HOST_IP", "0.0.0.0")
+MEGA_SERVICE_PORT = os.getenv("MEGA_SERVICE_PORT", 8889)
+EMBEDDING_SERVICE_HOST_IP = os.getenv("EMBEDDING_SERVICE_HOST_IP", "0.0.0.0")
+EMBEDDING_SERVICE_PORT = os.getenv("EMBEDDING_SERVICE_PORT", 6000)
+RETRIEVER_SERVICE_HOST_IP = os.getenv("RETRIEVER_SERVICE_HOST_IP", "0.0.0.0")
+RETRIEVER_SERVICE_PORT = os.getenv("RETRIEVER_SERVICE_PORT", 7000)
+RERANK_SERVICE_HOST_IP = os.getenv("RERANK_SERVICE_HOST_IP", "0.0.0.0")
+RERANK_SERVICE_PORT = os.getenv("RERANK_SERVICE_PORT", 8000)
+
+
+class RetrievalToolService:
+    def __init__(self, host="0.0.0.0", port=8000):
+        self.host = host
+        self.port = port
+        self.megaservice = ServiceOrchestrator()
+
+    def add_remote_service(self):
+        embedding = MicroService(
+            name="embedding",
+            host=EMBEDDING_SERVICE_HOST_IP,
+            port=EMBEDDING_SERVICE_PORT,
+            endpoint="/v1/embeddings",
+            use_remote_service=True,
+            service_type=ServiceType.EMBEDDING,
+        )
+        retriever = MicroService(
+            name="retriever",
+            host=RETRIEVER_SERVICE_HOST_IP,
+            port=RETRIEVER_SERVICE_PORT,
+            endpoint="/v1/retrieval",
+            use_remote_service=True,
+            service_type=ServiceType.RETRIEVER,
+        )
+        rerank = MicroService(
+            name="rerank",
+            host=RERANK_SERVICE_HOST_IP,
+            port=RERANK_SERVICE_PORT,
+            endpoint="/v1/reranking",
+            use_remote_service=True,
+            service_type=ServiceType.RERANK,
+        )
+
+        self.megaservice.add(embedding).add(retriever).add(rerank)
+        self.megaservice.flow_to(embedding, retriever)
+        self.megaservice.flow_to(retriever, rerank)
+        self.gateway = RetrievalToolGateway(megaservice=self.megaservice, host="0.0.0.0", port=self.port)
+
+
+if __name__ == "__main__":
+    chatqna = RetrievalToolService(host=MEGA_SERVICE_HOST_IP, port=MEGA_SERVICE_PORT)
+    chatqna.add_remote_service()