Add a new embedding MosecEmbedding (#182)

* Add a new embedding MosecEmbedding. Signed-off-by: Jincheng Miao <jincheng.miao@intel.com> * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci --------- Signed-off-by: Jincheng Miao <jincheng.miao@intel.com> Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
opea-project · Jun 18, 2024 · f76685a · f76685a
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diff --git a/comps/embeddings/langchain-mosec/README.md b/comps/embeddings/langchain-mosec/README.md
@@ -0,0 +1,33 @@
+# build Mosec endpoint docker image
+
+```
+docker build --build-arg http_proxy=$http_proxy --build-arg https_proxy=$https_proxy -t langchain-mosec:latest -f comps/embeddings/langchain-mosec/mosec-docker/Dockerfile .
+```
+
+# build embedding microservice docker image
+
+```
+docker build --build-arg http_proxy=$http_proxy --build-arg https_proxy=$https_proxy -t opea/embedding-langchain-mosec:latest -f comps/embeddings/langchain-mosec/docker/Dockerfile .
+```
+
+# launch Mosec endpoint docker container
+
+```
+docker run -d --name="embedding-langchain-mosec-endpoint" -p 6001:8000  langchain-mosec:latest
+```
+
+# launch embedding microservice docker container
+
+```
+export MOSEC_EMBEDDING_ENDPOINT=http://127.0.0.1:6001
+docker run -d --name="embedding-langchain-mosec-server" -e http_proxy=$http_proxy -e https_proxy=$https_proxy -p 6000:6000 --ipc=host -e MOSEC_EMBEDDING_ENDPOINT=$MOSEC_EMBEDDING_ENDPOINT opea/embedding-langchain-mosec:latest
+```
+
+# run client test
+
+```
+curl localhost:6000/v1/embeddings \
+     -X POST \
+     -d '{"text":"Hello, world!"}' \
+     -H 'Content-Type: application/json'
+```
diff --git a/comps/embeddings/langchain-mosec/__init__.py b/comps/embeddings/langchain-mosec/__init__.py
@@ -0,0 +1,2 @@
+# Copyright (C) 2024 Intel Corporation
+# SPDX-License-Identifier: Apache-2.0
diff --git a/comps/embeddings/langchain-mosec/docker/Dockerfile b/comps/embeddings/langchain-mosec/docker/Dockerfile
@@ -0,0 +1,28 @@
+
+# Copyright (C) 2024 Intel Corporation
+# SPDX-License-Identifier: Apache-2.0
+
+FROM langchain/langchain:latest
+
+RUN apt-get update -y && apt-get install -y --no-install-recommends --fix-missing \
+    libgl1-mesa-glx \
+    libjemalloc-dev \
+    vim
+
+RUN useradd -m -s /bin/bash user && \
+    mkdir -p /home/user && \
+    chown -R user /home/user/
+
+USER user
+
+COPY comps /home/user/comps
+
+RUN pip install --no-cache-dir --upgrade pip && \
+    pip install --no-cache-dir -r /home/user/comps/embeddings/langchain-mosec/requirements.txt
+
+ENV PYTHONPATH=$PYTHONPATH:/home/user
+
+WORKDIR /home/user/comps/embeddings/langchain-mosec
+
+ENTRYPOINT ["python", "embedding_mosec.py"]
+
diff --git a/comps/embeddings/langchain-mosec/docker/docker_compose_embedding.yaml b/comps/embeddings/langchain-mosec/docker/docker_compose_embedding.yaml
@@ -0,0 +1,22 @@
+# Copyright (C) 2024 Intel Corporation
+# SPDX-License-Identifier: Apache-2.0
+
+version: "3.8"
+
+services:
+  embedding:
+    image: opea/embedding-langchain-mosec:latest
+    container_name: embedding-langchain-mosec-server
+    ports:
+      - "6000:6000"
+    ipc: host
+    environment:
+      http_proxy: ${http_proxy}
+      https_proxy: ${https_proxy}
+      MOSEC_EMBEDDING_ENDPOINT: ${MOSEC_EMBEDDING_ENDPOINT}
+      LANGCHAIN_API_KEY: ${LANGCHAIN_API_KEY}
+    restart: unless-stopped
+
+networks:
+  default:
+    driver: bridge
diff --git a/comps/embeddings/langchain-mosec/embedding_mosec.py b/comps/embeddings/langchain-mosec/embedding_mosec.py
@@ -0,0 +1,74 @@
+# Copyright (C) 2024 Intel Corporation
+# SPDX-License-Identifier: Apache-2.0
+
+import os
+import time
+from typing import List, Optional
+
+from langchain_community.embeddings import OpenAIEmbeddings
+from langsmith import traceable
+
+from comps import (
+    EmbedDoc768,
+    ServiceType,
+    TextDoc,
+    opea_microservices,
+    register_microservice,
+    register_statistics,
+    statistics_dict,
+)
+
+
+class MosecEmbeddings(OpenAIEmbeddings):
+    def _get_len_safe_embeddings(
+        self, texts: List[str], *, engine: str, chunk_size: Optional[int] = None
+    ) -> List[List[float]]:
+        _chunk_size = chunk_size or self.chunk_size
+        batched_embeddings: List[List[float]] = []
+        response = self.client.create(input=texts, **self._invocation_params)
+        if not isinstance(response, dict):
+            response = response.model_dump()
+        batched_embeddings.extend(r["embedding"] for r in response["data"])
+
+        _cached_empty_embedding: Optional[List[float]] = None
+
+        def empty_embedding() -> List[float]:
+            nonlocal _cached_empty_embedding
+            if _cached_empty_embedding is None:
+                average_embedded = self.client.create(input="", **self._invocation_params)
+                if not isinstance(average_embedded, dict):
+                    average_embedded = average_embedded.model_dump()
+                _cached_empty_embedding = average_embedded["data"][0]["embedding"]
+            return _cached_empty_embedding
+
+        return [e if e is not None else empty_embedding() for e in batched_embeddings]
+
+
+@register_microservice(
+    name="opea_service@embedding_mosec",
+    service_type=ServiceType.EMBEDDING,
+    endpoint="/v1/embeddings",
+    host="0.0.0.0",
+    port=6000,
+    input_datatype=TextDoc,
+    output_datatype=EmbedDoc768,
+)
+@traceable(run_type="embedding")
+@register_statistics(names=["opea_service@embedding_mosec"])
+def embedding(input: TextDoc) -> EmbedDoc768:
+    start = time.time()
+    embed_vector = embeddings.embed_query(input.text)
+    embed_vector = embed_vector[:768]  # Keep only the first 768 elements
+    res = EmbedDoc768(text=input.text, embedding=embed_vector)
+    statistics_dict["opea_service@embedding_mosec"].append_latency(time.time() - start, None)
+    return res
+
+
+if __name__ == "__main__":
+    MOSEC_EMBEDDING_ENDPOINT = os.environ.get("MOSEC_EMBEDDING_ENDPOINT", "http://127.0.0.1:8080")
+    os.environ["OPENAI_API_BASE"] = MOSEC_EMBEDDING_ENDPOINT
+    os.environ["OPENAI_API_KEY"] = "Dummy key"
+    MODEL_ID = "/root/bge-large-zh"
+    embeddings = MosecEmbeddings(model=MODEL_ID)
+    print("Mosec Embedding initialized.")
+    opea_microservices["opea_service@embedding_mosec"].start()
diff --git a/comps/embeddings/langchain-mosec/mosec-docker/Dockerfile b/comps/embeddings/langchain-mosec/mosec-docker/Dockerfile
@@ -0,0 +1,23 @@
+# Copyright (C) 2024 Intel Corporation
+# SPDX-License-Identifier: Apache-2.0
+
+From ubuntu:22.04
+ARG DEBIAN_FRONTEND=noninteractive
+
+ENV GLIBC_TUNABLES glibc.cpu.x86_shstk=permissive
+
+COPY comps /root/comps
+
+RUN apt update && apt install -y python3 python3-pip 
+RUN pip3 install torch==2.2.2 torchvision --index-url https://download.pytorch.org/whl/cpu 
+RUN pip3 install intel-extension-for-pytorch==2.2.0
+RUN pip3 install transformers
+RUN pip3 install llmspec mosec
+
+RUN cd /root/ && export HF_ENDPOINT=https://hf-mirror.com && huggingface-cli download --resume-download BAAI/bge-large-zh --local-dir /root/bge-large-zh
+
+ENV EMB_MODEL="/root/bge-large-zh/"
+
+WORKDIR /root/comps/embeddings/langchain-mosec/mosec-docker
+
+CMD ["python3", "server-ipex.py"]
diff --git a/comps/embeddings/langchain-mosec/mosec-docker/README.md b/comps/embeddings/langchain-mosec/mosec-docker/README.md
@@ -0,0 +1,43 @@
+# Embedding Server
+
+## 1. Introduction
+
+This service has an OpenAI compatible restful API to extract text features.
+It is dedicated to be used on Xeon to accelerate embedding model serving.
+Currently the local model is BGE-large-zh.
+
+## 2. Quick Start
+
+### 2.1 Build Docker image
+
+```shell
+docker build -t embedding:latest .
+```
+
+### 2.2 Launch server
+
+```shell
+docker run -itd -p 8000:8000 embedding:latest
+```
+
+### 2.3 Client test
+
+- Restful API by curl
+
+```shell
+curl -X POST http://127.0.0.1:8000/v1/embeddings -H "Content-Type: application/json" -d '{ "model": "/root/bge-large-zh/", "input": "hello world"}'
+```
+
+- generate embedding from python
+
+```python
+DEFAULT_MODEL = "/root/bge-large-zh/"
+SERVICE_URL = "http://127.0.0.1:8000"
+INPUT_STR = "Hello world!"
+
+client = Client(api_key="fake", base_url=SERVICE_URL)
+emb = client.embeddings.create(
+    model=DEFAULT_MODEL,
+    input=INPUT_STR,
+)
+```
diff --git a/comps/embeddings/langchain-mosec/mosec-docker/server-ipex.py b/comps/embeddings/langchain-mosec/mosec-docker/server-ipex.py
@@ -0,0 +1,119 @@
+# Copyright (C) 2024 Intel Corporation
+# SPDX-License-Identifier: Apache-2.0
+
+import base64
+import os
+from typing import List, Union
+
+import intel_extension_for_pytorch as ipex
+import numpy as np
+import torch  # type: ignore
+import torch.nn.functional as F  # type: ignore
+import transformers  # type: ignore
+from llmspec import EmbeddingData, EmbeddingRequest, EmbeddingResponse, TokenUsage
+from mosec import ClientError, Runtime, Server, Worker
+
+DEFAULT_MODEL = "/root/bge-large-zh/"
+
+
+class Embedding(Worker):
+    def __init__(self):
+        self.model_name = os.environ.get("EMB_MODEL", DEFAULT_MODEL)
+        self.tokenizer = transformers.AutoTokenizer.from_pretrained(self.model_name)
+        self.model = transformers.AutoModel.from_pretrained(self.model_name)
+        self.device = torch.cuda.current_device() if torch.cuda.is_available() else "cpu"
+
+        self.model = self.model.to(self.device)
+        self.model.eval()
+
+        # jit trace model
+        self.model = ipex.optimize(self.model, dtype=torch.bfloat16)
+        vocab_size = self.model.config.vocab_size
+        batch_size = 16
+        seq_length = 512
+        d = torch.randint(vocab_size, size=[batch_size, seq_length])
+        t = torch.randint(0, 1, size=[batch_size, seq_length])
+        m = torch.randint(1, 2, size=[batch_size, seq_length])
+        self.model = torch.jit.trace(self.model, [d, t, m], check_trace=False, strict=False)
+        self.model = torch.jit.freeze(self.model)
+        self.model(d, t, m)
+
+    def get_embedding_with_token_count(self, sentences: Union[str, List[Union[str, List[int]]]]):
+        # Mean Pooling - Take attention mask into account for correct averaging
+        def mean_pooling(model_output, attention_mask):
+            # First element of model_output contains all token embeddings
+            token_embeddings = model_output["last_hidden_state"]
+            input_mask_expanded = attention_mask.unsqueeze(-1).expand(token_embeddings.size()).float()
+            return torch.sum(token_embeddings * input_mask_expanded, 1) / torch.clamp(
+                input_mask_expanded.sum(1), min=1e-9
+            )
+
+        # Tokenize sentences
+        # TODO: support `List[List[int]]` input
+        encoded_input = self.tokenizer(sentences, padding=True, truncation=True, return_tensors="pt")
+        inputs = encoded_input.to(self.device)
+        token_count = inputs["attention_mask"].sum(dim=1).tolist()
+        # Compute token embeddings
+        model_output = self.model(**inputs)
+        # Perform pooling
+        sentence_embeddings = mean_pooling(model_output, inputs["attention_mask"])
+        # Normalize embeddings
+        sentence_embeddings = F.normalize(sentence_embeddings, p=2, dim=1)
+
+        return token_count, sentence_embeddings
+
+    def deserialize(self, data: bytes) -> EmbeddingRequest:
+        return EmbeddingRequest.from_bytes(data)
+
+    def serialize(self, data: EmbeddingResponse) -> bytes:
+        return data.to_json()
+
+    def forward(self, data: List[EmbeddingRequest]) -> List[EmbeddingResponse]:
+        inputs = []
+        inputs_lens = []
+        for d in data:
+            inputs.extend(d.input if isinstance(d.input, list) else [d.input])
+            inputs_lens.append(len(d.input) if isinstance(d.input, list) else 1)
+        token_cnt, embeddings = self.get_embedding_with_token_count(inputs)
+
+        embeddings = embeddings.detach()
+        if self.device != "cpu":
+            embeddings = embeddings.cpu()
+        embeddings = embeddings.numpy()
+        embeddings = [emb.tolist() for emb in embeddings]
+
+        resp = []
+        emb_idx = 0
+        for lens in inputs_lens:
+            token_count = sum(token_cnt[emb_idx : emb_idx + lens])
+            resp.append(
+                EmbeddingResponse(
+                    data=[
+                        EmbeddingData(embedding=emb, index=i)
+                        for i, emb in enumerate(embeddings[emb_idx : emb_idx + lens])
+                    ],
+                    model=self.model_name,
+                    usage=TokenUsage(
+                        prompt_tokens=token_count,
+                        # No completions performed, only embeddings generated.
+                        completion_tokens=0,
+                        total_tokens=token_count,
+                    ),
+                )
+            )
+            emb_idx += lens
+        return resp
+
+
+if __name__ == "__main__":
+    MAX_BATCH_SIZE = int(os.environ.get("MAX_BATCH_SIZE", 128))
+    MAX_WAIT_TIME = int(os.environ.get("MAX_WAIT_TIME", 10))
+    server = Server()
+    emb = Runtime(Embedding, max_batch_size=MAX_BATCH_SIZE, max_wait_time=MAX_WAIT_TIME)
+    server.register_runtime(
+        {
+            "/v1/embeddings": [emb],
+            "/embeddings": [emb],
+        }
+    )
+    server.run()
diff --git a/comps/embeddings/langchain-mosec/mosec-docker/test-embedding.py b/comps/embeddings/langchain-mosec/mosec-docker/test-embedding.py
@@ -0,0 +1,18 @@
+# Copyright (C) 2024 Intel Corporation
+# SPDX-License-Identifier: Apache-2.0
+"""OpenAI embedding client example."""
+
+from openai import Client
+
+DEFAULT_MODEL = "/root/bge-large-zh/"
+SERVICE_URL = "http://127.0.0.1:8000"
+INPUT_STR = "Hello world!"
+
+client = Client(api_key="fake", base_url=SERVICE_URL)
+emb = client.embeddings.create(
+    model=DEFAULT_MODEL,
+    input=INPUT_STR,
+)
+
+print(len(emb.data))  # type: ignore
+print(emb.data[0].embedding)  # type: ignore
diff --git a/comps/embeddings/langchain-mosec/requirements.txt b/comps/embeddings/langchain-mosec/requirements.txt
@@ -0,0 +1,9 @@
+docarray[full]
+fastapi
+langchain
+langchain_community
+openai
+opentelemetry-api
+opentelemetry-exporter-otlp
+opentelemetry-sdk
+shortuuid