diff --git a/nf_core/pipelines/create/templatefeatures.yml b/nf_core/pipelines/create/templatefeatures.yml index 1d2d5246e5..8c5d5e139f 100644 --- a/nf_core/pipelines/create/templatefeatures.yml +++ b/nf_core/pipelines/create/templatefeatures.yml @@ -308,9 +308,9 @@ documentation: help_text: | This will add documentation markdown files where you can describe your pipeline. It includes: - - README.md: A README file where you can describe the basic use of your pipeline - - output.md: A file where you can explain the output generated by the pipeline - - usage.md: A file where you can explain the usage of the pipeline and its parameters. + - docs/README.md: A README file where you can describe the structure of your documentation. + - docs/output.md: A file where you can explain the output generated by the pipeline + - docs/usage.md: A file where you can explain the usage of the pipeline and its parameters. These files come with an exemplary documentation structure written. linting: