From f83bcd3f896dbe166b005d6d14a45037be2cb1e4 Mon Sep 17 00:00:00 2001 From: MaxUlysse Date: Wed, 9 Oct 2019 17:22:27 +0200 Subject: [PATCH 1/2] minor updates + typo fix --- CHANGELOG.md | 1 + README.md | 4 ++-- 2 files changed, 3 insertions(+), 2 deletions(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index eb7262e651..bf85a9f1a2 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -10,6 +10,7 @@ and this project adheres to [Semantic Versioning](http://semver.org/spec/v2.0.0. ### `Fixed` - [#40](https://github.com/nf-core/sarek/pull/40) - Fix issue with `publishDirMode` within `test` profile +- [#42](https://github.com/nf-core/sarek/pull/42) - Fix typos, and minor updates in `README.md` ## [2.5] - Ålkatj diff --git a/README.md b/README.md index 8b4cfdff20..397d38f57d 100644 --- a/README.md +++ b/README.md @@ -29,7 +29,7 @@ across multiple compute infrastructures in a very portable manner. Software dependencies are handled using [Conda](https://conda.io/), [Docker](https://www.docker.com) or [Singularity](https://www.sylabs.io/singularity/) - environment/container technologies that provide excellent reproducibility and ease of use. Thus making installation trivial and results highly reproducible. -It's listed on the [Elixir - Tools and Data Services Registry](https://bio.tools/Sarek), [Dockstore](https://dockstore.org/workflows/github.com/SciLifeLab/Sarek/) and [omicX - Bioinformatics tools](https://omictools.com/sarek-tool). +It's listed on the [Elixir - Tools and Data Services Registry](https://bio.tools/Sarek), [Dockstore](https://dockstore.org/workflows/github.com/nf-core/sarek) and [omicX - Bioinformatics tools](https://omictools.com/sarek-tool). ## Documentation @@ -98,7 +98,7 @@ For further information or help, don't hesitate to get in touch on [Slack](https If you use `nf-core/sarek` for your analysis, please cite the `Sarek` pre-print as follows: > Garcia MU, Juhos S, Larsson M, Olason PI, Martin M, Eisfeldt J, DiLorenzo S, Sandgren J, de Ståhl TD, Wirta V, Nistér M, Nystedt B, Käller M. **Sarek: A portable workflow for whole-genome sequencing analysis of germline and somatic variants**. *bioRxiv*. 2018. p. 316976. [doi: 10.1101/316976](https://www.biorxiv.org/content/10.1101/316976v1). -You can cite the sarek zenodo record for a specific version using the following [DOI: 10.5281/zenodo.3476426](https://zenodo.org/badge/latestdoi/184289291) +You can cite the sarek zenodo record for a specific version using the following [doi: 10.5281/zenodo.3476426](https://zenodo.org/badge/latestdoi/184289291) You can cite the `nf-core` pre-print as follows: > Ewels PA, Peltzer A, Fillinger S, Alneberg JA, Patel H, Wilm A, Garcia MU, Di Tommaso P, Nahnsen S. **nf-core: Community curated bioinformatics pipelines**. *bioRxiv*. 2019. p. 610741. [doi: 10.1101/610741](https://www.biorxiv.org/content/10.1101/610741v3). From 5047640493df152d4a7ee89318e4db6e3e569f34 Mon Sep 17 00:00:00 2001 From: MaxUlysse Date: Wed, 9 Oct 2019 17:24:36 +0200 Subject: [PATCH 2/2] fix typo --- README.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/README.md b/README.md index 397d38f57d..0de61ba17c 100644 --- a/README.md +++ b/README.md @@ -29,7 +29,7 @@ across multiple compute infrastructures in a very portable manner. Software dependencies are handled using [Conda](https://conda.io/), [Docker](https://www.docker.com) or [Singularity](https://www.sylabs.io/singularity/) - environment/container technologies that provide excellent reproducibility and ease of use. Thus making installation trivial and results highly reproducible. -It's listed on the [Elixir - Tools and Data Services Registry](https://bio.tools/Sarek), [Dockstore](https://dockstore.org/workflows/github.com/nf-core/sarek) and [omicX - Bioinformatics tools](https://omictools.com/sarek-tool). +It's listed on the [Elixir - Tools and Data Services Registry](https://bio.tools/Sarek), [Dockstore](https://dockstore.org/workflows/github.com/nf-core/sarek) and [omicX - Bioinformatics tools](https://omictools.com/sarek-tool). ## Documentation