--n_haplotypes must be a required argument again

[subwaystation]

Description of the bug

With the new template update we miss this. I didn't spot this, because I always used the test profile for testing, but I did not test by hand.
I need to check what we need to add again @heuermh.

Command used and terminal output

Relevant files

No response

System information

No response

[subwaystation]

I spotted it now, because the resulting graph looks bad without specifying a reasonable value.

[subwaystation]

It is getting weird. It's already set as required at

pangenome/nextflow_schema.json

Line 13 in af6d1dd

"required": ["input", "n_haplotypes", "outdir"],

.
However when I run

nextflow run main.nf -profile docker --outdir sun --input ../pggb/data/HLA/DRB1-3123.fa.gz -config conf/hla.config

There is no complaint that the parameter is missing. The pipeline runs through with it's default value 0 I assume.
Any ideas @heuermh?

[subwaystation]

I need to set it to null apparently. See #220

[heuermh]

Fixed by #219