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update module: bowtie2 #6821

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nservant opened this issue Oct 22, 2024 · 1 comment · May be fixed by #6870
Open
3 of 4 tasks

update module: bowtie2 #6821

nservant opened this issue Oct 22, 2024 · 1 comment · May be fixed by #6870
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@nservant
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Is there an existing module for this?

  • I have searched for the existing module

Is there an open PR for this?

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Is there an open issue for this?

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Are you going to work on this?

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@nservant
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Could we update the bowtie2 module to version 2.5.4 ?
There is a bug in the 2.5.2 with the emptyr eads which makes the nf-core-hic pipeline crashing.
According to the bowtie2 changelog, I think the bug has been fixed now.

PS ; I can make a pull request to update the environment.yml but I do not know how to update the mulled singularity image ?

@LucilleAugusta LucilleAugusta self-assigned this Oct 28, 2024
@LucilleAugusta LucilleAugusta linked a pull request Oct 28, 2024 that will close this issue
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@LucilleAugusta LucilleAugusta linked a pull request Oct 28, 2024 that will close this issue
2 tasks
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