From dd2bd308473a2b32a2743121ae838adae1109638 Mon Sep 17 00:00:00 2001 From: Daniel Lundin Date: Fri, 29 Nov 2024 16:21:49 +0100 Subject: [PATCH] Add missing library declaration --- modules/local/format_pplacetax.nf | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/modules/local/format_pplacetax.nf b/modules/local/format_pplacetax.nf index 92930b19..06f6a8c5 100644 --- a/modules/local/format_pplacetax.nf +++ b/modules/local/format_pplacetax.nf @@ -59,7 +59,7 @@ process FORMAT_PPLACETAX { # then, check if reduced entries are identical > if yes, choose any row, if no, repeat # at that step the taxonomies have same length print( paste ( asvid,"enters STEP 3" ) ) - list_taxonpath <- str_split( temp\$taxopath, ";") + list_taxonpath <- stringr::str_split( temp\$taxopath, ";") df_taxonpath <- as.data.frame(do.call(rbind, list_taxonpath)) for (i in ncol(df_taxonpath):0) { # choose first column and change taxon to reduced overlap