ENH: Augur clades does not throw helpful error when no --clades
is passed
#1153
Labels
enhancement
New feature or request
--clades
is passed
#1153
Context
Augur clades doesn't seem to throw a helpful error when required options are missing.
Also, the documentation doesn't seem to mention which options are required.
E.g. (from a user who didn't pass any
--clades
option:Also confusingly, it can appear to users that the error happened in the validation step - because the error happens right after the line:
Validating schema of 'results/nt_muts.json'...
, that should probably start withINFO:
or otherwise be separated better.Would be good if the docs for
augur clades
command linked to: https://docs.nextstrain.org/projects/augur/en/stable/faq/clades.html#labeling-cladesThe text was updated successfully, but these errors were encountered: