Merge pull request #367 from natearoe/roe_edits

get_NASIS_table_name_by_purpose: Add basal area tables

Author: brownag

R/get_NASIS_table_name_by_purpose.R

@@ -1,7 +1,7 @@
-#' Get NASIS 7 Physical Table Names 
-#' 
+#' Get NASIS 7 Physical Table Names
+#'
 #' Method generalizing concepts of NASIS 7 data model to group tables by "purpose." Most of our more complex queries rely on tables from one or more purposes, so individual higher-level functions might call a function like this to identify the relevant tables from a data source.
-#' 
+#'
 #' @param purpose character. One or more of: "metadata", "lookup", "nasis", "site", "pedon", "transect", "component", "vegetation", "project", "techsoilservice", "area", "soilseries", "legend", "mapunit", "datamapunit"
 #' @param SS append "_View_1" on appropriate tables? Default: FALSE
 #'
@@ -12,30 +12,30 @@
 #' \dontrun{
 #' # get the "site" table names
 #' get_NASIS_table_name_by_purpose("site")
-#' 
+#'
 #' # get the pedon table names
 #' get_NASIS_table_name_by_purpose("pedon", SS = TRUE)
-#' 
+#'
 #' # metadata and lookup not affected by SS argument, but site and pedon are
 #' get_NASIS_table_name_by_purpose(c("metadata", "lookup",
 #'                                    "site", "pedon"), SS = TRUE)
 #' }
-#' 
-get_NASIS_table_name_by_purpose <- function(purpose = c("metadata", "lookup", "nasis", "site", 
-                                                         "pedon", "transect", "component", 
-                                                         "vegetation", "project", 
+#'
+get_NASIS_table_name_by_purpose <- function(purpose = c("metadata", "lookup", "nasis", "site",
+                                                         "pedon", "transect", "component",
+                                                         "vegetation", "project",
                                                          "techsoilservice", "area",
                                                          "soilseries", "legend",
                                                          "mapunit", "datamapunit"),
                                              SS = FALSE) {
-  
+
   # TODO: store as .rda?
   table_groups <- list(
     metadata = c(
       "MetadataDomainDetail",
       "MetadataDomainMaster",
-      "MetadataTableColumn", 
-      "MetadataTable", 
+      "MetadataTableColumn",
+      "MetadataTable",
       "MetadataColumnLookup",
       "MetadataIndexDetail"
     ),
@@ -118,7 +118,7 @@ get_NASIS_table_name_by_purpose <- function(purpose = c("metadata", "lookup", "n
     component = c(
       "component",
       "chorizon",
-      "chfrags", 
+      "chfrags",
       "chhuarts",
       "chtexturegrp",
       "chstructgrp",
@@ -168,7 +168,9 @@ get_NASIS_table_name_by_purpose <- function(purpose = c("metadata", "lookup", "n
       "comparativeyielddata",
       "comparativeyieldrefquadrats",
       "pointplantcoverdetails",
-      "plantprodquadratdetails"
+      "plantprodquadratdetails",
+      "plotspeciesbasalarea",
+      "basalareatreescounted"
     ),
     project = c(
       "project",
@@ -202,33 +204,33 @@ get_NASIS_table_name_by_purpose <- function(purpose = c("metadata", "lookup", "n
     datamapunit = "datamapunit",
     nasis = c("nasisgroup", "nasisuser")
   )
-  
-  uses_View_1 <- list("metadata" = FALSE, 
-                      "lookup" = FALSE, 
-                      "site" = TRUE, 
-                      "pedon" = TRUE, 
-                      "transect" = TRUE, 
-                      "component" = TRUE, 
+
+  uses_View_1 <- list("metadata" = FALSE,
+                      "lookup" = FALSE,
+                      "site" = TRUE,
+                      "pedon" = TRUE,
+                      "transect" = TRUE,
+                      "component" = TRUE,
                       "vegetation" = TRUE,
                       "project" = TRUE,
-                      "techsoilservice" = TRUE, 
+                      "techsoilservice" = TRUE,
                       "area" = TRUE,
                       "soilseries" = FALSE,
-                      "legend" = TRUE, 
-                      "mapunit" = TRUE, 
+                      "legend" = TRUE,
+                      "mapunit" = TRUE,
                       "datamapunit" = TRUE,
                       "nasis" = FALSE)
-  
+
   purpose <- match.arg(purpose, names(table_groups), several.ok = TRUE)
-  
+
   res <- table_groups[purpose]
-  
+
   res <- lapply(seq_along(res), function(i) {
       ni <- names(res)[i]
-      if (uses_View_1[[ni]] && SS) 
+      if (uses_View_1[[ni]] && SS)
         return(paste0(res[[ni]], "_View_1"))
       else return(res[[ni]])
     })
-  
+
   return(as.character(unlist(res)))
 }