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test_dna.fa
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test_dna.fa
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>contig01 blaTEM-156_cds
AACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGATACAATAACCCTGATAA
ATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTT
TTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCA
GTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCC
GAAGAACGTTTTCCAATGATGAGCACTTTTAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTGTTGACG
CCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCAC
AGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAAC
ACTGCGGCCAACTTACTTCTGACAACGATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATAG
GGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGA
CACCACGATGCCTGCAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCT
TCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTC
CGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACT
GGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAA
CGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAACTGTCAGACCAAGTTTACT
CATA
>contig02 blaPDC-114_blast_cds
ATGCGCGATACCAGATTCCCCTGCCTGTGCGGCATCGCCGCTTCCACACTGCTGTTCGCCACCACCCCGG
CCATTGCCGGCGAGGCCCCGGCGGATCGCCTGAAGGCACTGGTCGACGCCGCCGTACAACCGGTGATGAA
GGCCAATGACATTCCGGGCCTGGCCGTAGCCATCAGCCTGAAAGGAGAACCGCATTACTTCAGCTATGGG
CTGGCCTCGAAAGAGGACGGCCGCCGGGTGACGCCGGAGACCCTGTTCGAGATCGGCTCGGTGAGCAAGA
CCTTCACCGCCACCCTCGCCGGCTATGCCCTGACCCAGGACAAGATGCGCCTCGACGACCGCGCCAGCCA
GCACTGGCCGGCACTGCAGGGCAGCCGCTTCGACGGCATCAGCCTGCTCGACCTCGCGACCTATACCGCC
GGCGGCTTGCCGCTGCAGaTCCCCGACTCGGTGCAGAAGGACCAGGCACAGATCCGCGACTACTACCGCC
AGTGGCAGCCGACCTACGCGCCGGGCAGCCAGCGCCTCTATTCCAACCCGAGCATCGGCCTGTTCGGCTA
TCTCGCCGCGCGCAGCCTGGGCCAGCCGTTCGAACGGCTCATGGAGCAGCAAGTGTTCCCGGCACTGGGC
CTCGAACAGACCCACCTCGACGTGCCCGAGGCGGCGTTGGCGCAGTACGCCCAGGGCTACGGCAAGGACG
ACCGCCCGCTACGGGCCGGTCCCGGCCCGCTGGATGCCGAAGGCTACGGGGTGAAGACCAGCGCGGCCGA
CCTGCTGCGCTTCGTCGATGCCAACCTGCATCCGGAGCGCCTGGACAGGCCCTGGGCGCAGGCGCTCGAT
GCCACCCATCGCGGTTACTACAAGGTCGGCGACATGACCCAGGGCCTGGGCTGGGAAGCCTACGACTGGC
CGATCTCCCTGAAGCGCCTGCAGGCCGGCAACTCGACGCCGATGGCGCTGCAACCGCACAGGATCGCCAG
GCTGCCCGCGCCACAGGCGCTGGAGGGCCAGCGCCTGCTGAACAAGACCGGTTCCACCAACGGCTTCGGC
GCCTACGTGGCGTTCGTCCCGGGCCGCGACCTGGGACTGGTGATCCTGGCCAACCGCAACTATCCCAATG
CCGAGCGGGTGAAGATCGCCTACGCCATCCTCAGCGGCCTGGAGCAGCAGGGCAAGGTGCCGCTGAAGCG
CTGA
>contig03 blaOXA-436_partial_cds
GCCACAATTGGTCAGCAGTTTGCTATTGAAAGCCCGCCAAGACGGTGCTACTCTTAGCGCCTCATTTTTATGGATTTATTGCATTAGGCAAGGGGACATTATGCGTGCGTTAGCCTTATCGGCTGTGTTGATGGTGACAACGATGATTGGCATGCCTGCGGTGGCAAAGGAGTGGCAAGAGAACAAGAGTTGGAATGCTCACTTTAGCGAACATAAAACCCAAGGCGTGGTTGTGCTCTGGAACGAGAATACACAGCAGGGTTTTACCAACGATCTTAAACGGGCAAACCAAGCATTTTTACCTGCATCGACCTTTAAGATCCCAAACAGTTTAATTGCCTTGGACTTAGGTGTGGTTAAGGATGAGCATCAAGTCTTTAAATGGGATGGACAGACGCGAGATATCGCCGCGTGGAATCGCGACCATGACTTAATCACCGCGATGAAGTATTCGGTTGTGCCTGTTTATCAAGAATTTGCCCGCCAAATTGGCGAGGCCCGTATGAGTAAAATGTTGCACGCCTTCGATTATGGTAATGAGGATATCTCGGGCAATTTGGACAGTTTTTGGCTCGATGGTGGTATTCGCATTTCGGCTACCCAGCAAATCGCTTTTTTACGCAAGCTGTACCACAACAAGTTGCACGTTTCTGAGCGTAGTCAGCGCATCGTTAAACAAGCCATGCTGACCGAGGCAAATGCCGACTATATCATCCGGGCGAAAACTGGCTATTCGGTCAGAATTGAACCGAAAATCGGTTGGTGGGTTGGCTGGATCGAACTGGATGACAATGTGTGGTTCAAGTGGTTAGCGGCGCATTTGTGTAAAATAGCCGTCATATAAGCTGTAAAGTTATATGGACAAAATACTTATAGTCGATGCGCTTATCGCTAATGGCTCA
>contig04 vanG_cds exact then a blaEC
ATGACTGGTAGTCAGACGGAAAAAGAATTGTATGTCAACCAATGTAAAATAGCCTATAAGCTACCCGATG
GTGTAAAAATTGAAGAAAGAGGTGTGTAAAATGCAAAATAAAAAAATAGCAGTTATTTTTGGAGGCAATT
CAACAGAGTACGAGGTGTCATTGCAATCGGCATCCGCTGTTTTTGAAAATATCAATACCAATAAATTTGA
CATAATTCCAATAGGAATTACAAGAAGTGGTGAATGGTATCACTATACGGGAGAAAAGGAGAAAATCCTA
AACAATACTTGGTTTGAAGATAGCAAAAATCTATGCCCTGTTGTCGTTTCCCAAAATCGTTCCGTTAAAG
GCTTTTTAGAAATTGCTTCAGACAAATACCGTATTATAAAAGTTGATTTGGTATTCCCCGTATTGCATGG
CAAAAACGGCGAAAATGGGACTTTGCAGGGCATATTTGAATTGGCAGGAATACCTGTTGTTGGCTGCGAT
ACACTCTCATCAGCTCTTTGTATGGATAAGGACAGGGCACATAAACTCGTTAGCCTTGCGGGTATATCTG
TTCCTAAATCGGTAACATTCAAACGCTTTAACGAAGAAGCAGCGATGAAAGAGATTGAAGCGAATTTAAC
TTATCCGCTGTTTATTAAACCTGTTCGTGCAGGCTCTTCCTTTGGAATAACAAAAGTAATTGAAAAGCAA
GAGCTTGATGCTGCCATAGAGTTGGCATTTGAACACGATACAGAAGTCATCGTTGAAGAAACAATAAACG
GCTTTGAAGTCGGTTGTGCCGTACTTGGCATAGATGAGCTCATTGTTGGCAGAGTTGATGAAATCGAACT
GTCAAGCGGCTTTTTTGATTATACAGAGAAATATACGCTTAAATCTTCAAAGATATATATGCCTGCAAGG
ATTGATGCCGAAGCAGAAAAACGGATACAAGAAGCGGCTGTAACCATATATAAAGCTCTGGGCTGTTCGG
GTTTTTCCAGAGTGGATATGTTTTATACACCGTCTGGCGAAATTGTATTTAATGAGGTAAACACAATACC
AGGCTTTACCTCGCACAGTCGCTATCCAAATATGATGAAAGGCATTGGTCTATCGTTCTCCCAAATGTTG
GATAAGCTGATAGGTCTGTATGTGGAATGATGAAAACGATTGAGCTTGAAAAGGAAGAAATTTATTGTGG
AAATTTGCTGCTCGTCAACAAAAATTATCCGCTACGAGATAACAATGTAAAGGGTTTAGT
AAAAAAAAAA
ATGTTCAAAACGACGCTCTGCGCCTTATTAATTACCTCCTCTTGCTCCACATTTGCTGCC
CCTCAACAAATCAACGATATTGTGCATCGCACAATTACCCCGCTTATAGAGCAACAAAAG
ATCCCCGGTATGGCGGTGGCGGTAATTTATCAGGGTAAACCTTATTACTTTACCTGGGGC
TATGCGGACATCGCCAAAAAGCAGCCCGTCACACAGCAAACGTTGTTTGAGTTAGGTTCG
GTCAGCAAAACATTTACGGGCGTGCTTGGTGGCGACGCTATTGCTCGAGGGGAAATCAAG
TTAAGCGATCCCACAACAAAATACTGGCCTGAACTTACCGCTAAACAGTGGAATGGGATC
ACACTATTACATCTCGCAACCTACACTGCTGGCGGCCTGCCATTGCAGGTGCCGGATGAG
GTGAAATCCTCAAGCGACTTGCTGCGCTTCTATCAAAACTGGCAGCCTGCATGGGCGCCA
GGAACACAACGTCTGTATGCCAACTCCAGTATCGGTTTGTTCGGCGCACTGGCTGTGAAG
CCGTCTGGTTTGAGTTTTGAGCAGGCGATGCAAACACGTGTCTTCCAGCCACTCAAACTC
AACCATACGTGGATTAATGTACCGCCCGCAGAAGAAAAGAATTACGCCTGGGGATATCGC
GAAGGCAAGGCAGTTCATGTTTCGCCAGGGGCGTTAGATGCTAAAACTTATGGTGTGAAG
TCGACCATTGAAGATATGGCCTGCTGGGTACGAAGCAATATGAATCCCCGTGATATCAAC
GACAAAACACTTCAGCAAGGGATACAACTGGCACAATCTCGCTACTGGCAAACCGGCGAT
ATGTATCAGGGCCTGGGCTGGGAAATGCTGGACTGGCCGGTAAATCCTGACAGCATCATT
AACGGCAGTGGCAATAAAATTGCACTGGCAGCACACCCCGTAAAAGCGATTACGCCCCCA
ACTCCTGCAGTACGCGCATCATGGGTACATAAAACAGGGGCAACCGGCGGATTTGGTAGC
TATGTCGCGTTTATTCCAGAAAAAGAGCTGGGTATAGTGATGCTGGCTAACAAAAACTAT
CCCAATCCAGCGAGAGTCGCCGCCGCCTGGCAGATTCTCAACGCTCTACAGTAA
>contig06 gyrA:T86I
TCAAAACTTTGAACTAATAGAAGGATTTTTATGGAGAATATTTTTAGCAAAGATTCTGAT
ATTGAACTTGTAGATATAGAAAATTCTATAAAAGGTAGTTACTTAGACTATTCTATGAGT
GTTATTATAGGTCGTGCTTTGCCTGACGCAAGAGATGGTTTAAAGCCTGTTCATAGAAGA
ATTTTATATGCTATGCAAAATGATGAGGCAAAAAGTAGAACAGATTTTGTCAAATCAGCC
CGTATAGTGGGTGCTGTTATAGGTCGTTATCATCCACATGGAGATATAGCAGTTTATGAT
GCTTTGGTTAGAATGGCTCAAGATTTTTCTATGAGATATCCAAGTATTACAGGACAAGGC
AACTTTGGATCTATAGATGGTGATAGCGCTGCTGCGATGCGTTATACTGAAGCAAAAATG
AGTAAACTTTCTCATGAGCTTTTAAAAGATATAGATAAAGATACGGTCGATTTTGTTCCA
AATTATGATGGTTCAGAAAGTGAACCTGATGTCTTACCTTCTAGGGTTCCAAATTTATTA
TTAAATGGTTCAAGTGGTATAGCTGTAGGTATGGCGACAAACATCCCACCTCATAGTTTA
AATGAGTTGATAGATGGACTTTTATATTTGCTTGATAGTAAAGATGCAAGCTTAGAAGAG
ATTATGCAGTTTATCAAAGGTCCAGATTTTCCAACAGGTGGAATAATTTATGGTAAAAAA
GGTATTATAGAAGCTTATCGCACAGGGCGTGGTCGCGTGAAAGTGCGCGCTAAAACTCAT
ATTGAAAAAAAGACAAATAAAGATGTTATTGTTATAGATGAGCTTCCTTATCAAACCAAT
AAAGCTAGGCTTATAGAACAGATTGCAGAGCTTGTTAAAGAAAAGCAAATTGAAGGAATA
TCTGAAGTAAGAGATGAGAGCAATAAAGAAGGAATCCGCGTTGTTATAGAGCTTAAACGT
GAGGCTATGAGTGAAATTGTTTTAAACAATCTATTTAAATCTACTACTATGGAAAGTACT
TTTGGTGTGATTATGTTGGCAATTCACAATAAAGAACCTAAAATTTTCTCTTTGTTAGAA
CTTTTAAATCTTTTCTTAACCCATAGAAAAACAGTTATTATTAGAAGAACGATTTTTGAA
CTTCAAAAGGCAAGAGCAAGAGCTCATATTTTAGAAGGTCTTAAAATTGCACTTGATAAT
ATAGATGAAGTGATTGCTTTAATTAAAAATAGTTCTGATAATAATACCGCAAGAGATTCT
TTGGTAGCTAAATTTGGTCTTAGTGAGCTTCAAGCCAATGCTATTTTAGATATGAAACTT
GGTCGTTTAACAGGACTTGAAAGAGAAAAAATCGAAAATGAACTTGCAGAATTAATGAAA
GAAATTGCAAGACTTGAAGAAATTTTAAAAAGTGAAACCTTGCTTGAAAATTTAATTCGC
GATGAATTAAAAGAAATTAGAAGTAAATTTGATGTGCCACGTATTACTCAAATTGAAGAT
GATTATGATGATATTGATATTGAAGATTTGATTCCTAATGAAAATATGGTTGTAACTATT
ACGCATCGTGGTTATATTAAGCGTGTGCCTAGTAAACAATATGAAAAGCAAAAACGAGGC
GGAAAAGGAAAATTAGCCGTTACGACTTATGATGATGATTTTATAGAAAGTTTCTTTACG
GCAAATACACATGATACACTTATGTTTGTAACAGATCGTGGACAGCTTTATTGGCTTAAA
GTTTATAAAATTCCTGAAGGCTCAAGAACGGCTAAAGGAAAAGCAGTGGTAAATCTTATT
AATTTACAAGCTGAAGAAAAAATCATGGCTATTATTCCAACCACGGATTTTGATGAGAGT
AAATCTTTATGTTTCTTTACTAAAAATGGTATTGTAAAGCGTACAAATTTGAGTGAATAT
CAAAATATCAGAAGTGTAGGAGTTAGAGCGATCAACTTGGATGAAAATGATGAGTTGGTA
ACTGCTATTATTGTTCAAAGAGATGAAGATGAAATTTTTGCCACTGGTGGTGAAGAAAAT
TTAGAAAATCAAGAAATTGAAAATTTAGATGATGAAAATCTTGAAAATGAAGAAAGTGTA
AGCACACAAGGTAAAATGCTCTTTGCAGTAACCAAAAAAGGTATGTGTATCAAATTCCCA
CTTGCTAAAGTGCGTGAAATCGGCCGTGTAAGTCGTGGGGTGACGGCTATTAAGTTTAAA
GAGAAAAATGACGAATTAGTAGGTGCAGTTGTTATAGAAAATGATGAGCAAGAAATTTTA
AGCATAAGTGCAAAAGGTATAGGAAAACGCACAAATGCTGGAGAATATAGATTGCAAAGC
AGAGGTGGTAAGGGTGTAATTTGTATGAAACTTACAGAAAAAACCAAAGATCTTATTAGC
GTAGTTATAGTAGATGAAACTATGGATTTGATGGCTCTTACAAGTTCAGGCAAGATGATA
CGTGTTGATATGCAAAGCATTAGAAAAGCAGGGCGTAATACGAGTGGTGTCATTGTAGTT
AATGTGGAAAATGACGAGGTGGTTAGCATCGCTAAGTGTCCTAAAGAGGAAAATGATGAG
GATGAGTTAAGCGATGAAAACTTTGGTTTAGATTTGTAATAAGTTTAAA
AGGGCATAAAGGCTCTGTGCAAAAGAAAATTGGTAAGTAAGGGATAAGATATGAGTAAAG
CATTAATTAAATTCATAAGATTATCTTCAACTAAAGCAAGATTGATTGCTAGAGAAGTTC
AGGGGATGAATGCAGAATTAGCTATGGCTAGTTTAAAATTTATGCCAAATAAAGGTGCAA
AATATATCGCAAATGCAATTTCAAGTGCAGTAGCAAATGGTGGCTTTGAAGCAAACGAAG
TGATTGTAAAAAGTTGTCGTGTTGACGCAGCTGCGGTATTAAAAAGATTTAGACCAAGAG
CTAGAGGAAGTGCAAGTCGTATTAGAAAACCAACTTCACATATTTTAGTAGAAGTGGTAA
AAGCGGAAGTGAAAGCTGAAGAGAAAAAAACAGTAGCTAAAAAAACTACTACAACAAAAG
CTCCAGCTAAAAAAACAACAAGCACTAAAAAAGCAACAGCGAAAAAGGAAAGCTAATGGG
ACAAAAAGTTAATCCAATTGGTCTAAGACTAGGAATCAATAGAAAC
>contig05 Campylobacter 23S:A2075G
TAAGAGCAAGTTCTAATACAAACTCTACTTGAAAGATTTCTATTAAACTCTAAATATTAT
CTATATTCAAAGTCTTCTTAAAAACCTTAACAAGGAAGTGATGCTTTATTAAAGATAAGC
CAAACGCTCTATTAGTACTGGTCAGCTAAAGGACTTTCATCCATTACACACCCAGCCTAT
CAAACTAGTAGTCTTCTAGAGAGCTTAGAGAAGATTCATCTTAGAGTTGGCTTCACGCTT
AGATGCTTTCAGCGTTTATCCTTTCCAAACTTAGCTACGCTGCGATGCTCTTGGCAGAAC
AACAGCTACACCAGTGGTTTGTTCAACCCGGTCCTCTCGTACTAGGGTCAAATCTCTTCA
ATCTTCTTACGCCCACGGCAGATAGGGACCGAACTGTCTCACGACGTTCTGAACCCAGCT
CGCGTACCGCTTTAAATGGCGAACAGCCATACCCTTGGGACCTGCTCCAGCCCCAGGATG
CGATGAGCCGACATCGAGGTGCCAAACCTCCCCGTCGATGTGAGCTCTTGGGGGAGATCA
GCCTGTTATCCCCGGGGTACCTTTTATCCTTTGAGCGATGGCCCTTCCACACAGAACCAC
CGGATCACTAAGACCGACTTTCGTCTCTGCTTGACTTGTATGTCTTGCAGTTAAGCTGGC
TTATACCTTTATACTCTACGAACGATTTCCAACCGTTCTGAGCCAACCTTTGTAAGCCTC
CGTTATTATTTGGGAGGCGACCGCCCCAGTCAAACTACCCACCAGACATTGTCCCACTTG
AGGATAACTCAAGCTGGTTAGCTACCCAAATAAGAAAGAGTGGTATCTCAACAATGGCTC
ATATACAACTGGCGTCATATACTCAAAGCCTCCCACCTATCCTGCACATTCTTATCCAAA
TAGCAGTGTCAAGCTGTAGTAAAGGTCCACGGGGTCTCTCCGTCTTGCCGCGGGTAGGAG
GAATTTTCACCTCCACTACAATTTCACTGGATCCCTCTTTGAGACAGCTCCCATCTCGTT
ACGCCATTCATGCAGGTCGGTATTTAACCGACAAGGAATTTCGCTACCTTAGGACCGTTA
TAGTTACGGCCGCCGTTTACTCGGGCTTCGATCAAGAGCTTCGCTAATGCTAACCCCATC
AATTAACCTTCGAGCACCGGGCAGGCGTCACACCCTATACATCCTCTTACGAGTTAGCAG
AGTGCTGTGTTTTTGGTAAACAGTCGGGAGGGACTCTTTGTTGTAAGTTTCTTCGCTTTC
GGAGTAAATCCTAATACGAAGCGAACCACACCTTATACCGAAGATACGGTGCTATTTTGC
AGAGTTCCTTAAAGAGAGTTCTTCCACGCGCCTTAGAATACTCATCCCACCCACCTGTGT
CGGTTTACGGTACGGGCAACATTAGCTAAACTTAGAAACTTTTCTTGGCTCGATGGCATC
AGGGGTTCTTCTATCCATCCGAAGACTTCAAAAAGCCTTTCAGTTCTCGGAGTATTGTTA
TACGGATTTGCCTGTATAACCTCCTACGACCTTAGACTAGCACTTCCATCCGCTAGCCCC
CTTAGCCCTAAGCGTCCTTCCATCGCACACTAATGTTGGTATTGGAATATTAACCAATTT
GCCATCGTCTACCCCTTTCGGACTCGACTTAGGACCCGACTAACCCTACGATGACGAGCA
TCGCGTAGGAAACCTTGGGTTTACGGCGTTAATGATTCTCACATTAATTATCGCTACTCA
TGCCTGCATGCTCACTTCTATTCGCTCCAGCACTCCTTACCGGTATACCTTCGACGCAAA
TAGAACGCTCTCCTACCACTTGCACACAACTTAAACTACTTAACTTTAGTCTAAGAATAT
TTTTACTGATTTTACTAAGTTTTATTTCTATCTTTACTCTATAAAAATCAGTAAAAATAT
AACTAAACATATAACTTAGTTTCTCATATTCTAAACTTAAATAATCTAAGTTGTGCGCAA
GTCTACAGCTTCGGTACTTACTTTAGCCCCGTTATATTTTC
>contig07 Campylobacter 50S_L22:A103V NZ_CUUA01000002.1 Campylobacter jejuni strain OXC6585, whole genome shotgun sequence 59884-60509
AATCACATCGGTTATAAGCTTGGTGAATTTGCTCCAACACGCACATTTAAAGGGCATAAA
GGCTCTGTGCAAAAGAAAATTGGTAAGTAAGGGATAAGATATGAGTAAAGCATTAATTAA
ATTCATAAGATTATCTTCAACTAAAGCAAGATTGATTGCTAGAGAAGTTCAGGGGATGAA
TGCAGAATTAGCTATGGCTAGTTTAAAATTTATGCCAAATAAAGGTGCAAAATATATCGC
AAATGCAATTTCAAGTGCAGTAGCAAATGGTGGCTTTGAAGCAAACGAAGTGATTGTAAA
AAGTTGTCGTGTTGACGCAGCTGCGGTATTAAAAAGATTTAGACCAAGAGCTAGAGGAAG
TGCAAGTCGTATTAGAAAACCAACTTCACATATTTTAGTAGAAGTGGTAAAAGCGGAAGT
GAAAGCTGAAGAGAAAAAAACAGTAGCTAAAAAAACTACTACAACAAAAGCTCCAGCTAA
AAAAACAACAAGCACTAAAAAAGCAACAGCGAAAAAGGAAAGCTAATGGGACAAAAAGTT
AATCCAATTGGTCTAAGACTAGGAATCAATAGAAACTGGGAATCAAGATGGTTTCCAACT
AAAGCAAATTTAGTAGAAAATATCGG
>contigX nimIJ_hmm NZ_JHXM01000017.1:91300-91800 Prevotella brevis ATCC 19188 T433DRAFT_scaffold00015.15_C, whole genome shotgun sequence
CTAATTACCACCGCGCTGCCTTACCAACTCAATAGCCTCTTTACCTGTCAGGTGCTCAATGTCCATACGG
ATGGCCAGCATATGTGCAAGGCCGCTTTCCAGTTCTTTCTGCAAGGCGTCGTCATGGTTGGGATTAAAGC
GATTACCCATCATATGCATGATGGTTCGTTTCTCGGCTTCATCCTCTACAATTTCAATTCTGCCAAAGGC
TATCACACTACGAAAGTAGGTGGTGTACTTCTCTGGTCTCACATCGTCCTTTTCTATAACACAAAAAGAG
GCTTTGTTGCATCTGCGGATGGCATCCACTTTATGGCCAGCCATAGCACTGTGGAAGTATAGTTTGCCGT
TGTCATAGACATAGCTGATGGGCACGGCATAGGGATAGTCATTATCGCCCAACAAGGCTAATGTGCCAGA
AGTAGCCTTCTGCAGAACGGCGATGCTGTCTGCGTCAGTCAGTTGCTGACGCTTTCGTCTCATTTCTCGG
AACTCACTCAT
>contig08 Partial_contig_end DNA only blaTEM-156
AACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGATACAATAACCCTGATAA
ATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTT
TTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCA
GTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCC
GAAGAACGTTTTCCAATGATGAGCACTTTTAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTGTTGACG
CCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCAC
AGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAAC
ACTGCGGCCAACTTACTTCTGACAACGATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATAG
GGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGA
CACCACGATGCCTGCAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCT
>contig09 >case4_case6_sul2_aph3pp-Ib Providencia rettgeri strain Pret_2032, whole genome shotgun sequence 2160922-2162737 150-1527 (reverse comp'd)
CAAATCGGCATAGCGATCTGCTGTTCCGAGCCGCCCAAGGTCGATCAGACCCGTGCATTGAAGAGTTTTA
GGGTCCACCATGAAGTTCGGCATGCAGGGATCACCATGGCAAACAACCATATCGGTGCGCTCTTGGTCGA
GCCGCACCGGTAGCTCTCGTTCGACACGAGCCAAAAGATCGAGCTGCGGCGTACTCTTGTCCTCGTCCGG
TAAGAAGTCGGGATTGACGGCATTGCGGGACACCACATCAACGGCGCGTCCGAACATTCGCGACAGCCTG
CGCTCAAACGGACATTGATCAACCGATAGGCTGTGAACAGCGCCAAGTTGCTGCCCCATTGACGGCCACG
CTTTGAGCAAATCCGCTCCAGACAGATCAGCCGCCGGTACTCCCGGAATTGCCGTTATCACCAAGCATGC
ACCCTCCTGTTCCTCCTGCCAGTTGATGACCTCGGGGCAAGCCACACCTCGACCTTTGAGCCAAATGAGG
CGGTCACGCTCTCCAGCGAGCTCACCGCGGCGGGAAGCAGGTGCGATTTTCGCGAAGGCATGCCCGTCAC
CACGTCGAAAAACAAAATCACCAGATTCTCCGCCTCTGACAGGCAACCAGTCAGAATGCGATTCACCAAA
AAAAATATTAGTTCGATTCAATGGAGGTTCCTTCAGTTTTCTGATGAAGCGCGAATATAGAGAAATATCC
CGAATGTGCAGTTAACGAATTCTTGCGGTTTCTTTTAGCGCCGCCAATACCGCCAGCCCGTCGCGCAAGG
GGCGCGGCTCGTGTGTGCGGATGAAGTCAGCTCCACCTGCGGCGGCGGCAAGCTCTGCAGCGAGTGTCGC
GGCCCCGACATCCCCCGGACCACGGCCTGTGAGCGCGCGCAGAAAGGATTTGCGCGAAACAGACAGAAGC
ACCGGCAAATCGAAGCGCAGCCGCAATTCATCGAACCGCGCCAGCACCGAGAGCGAGGTTTCGGGAGCAG
CCCCCAGAAAAAACCCCATGCCGGGATCAAGGACAAGGCGGTTGCGTTTGATACCGGCACCCGTCAGCGC
CGCGATGCGCGCGTCAAAGAACGCCGCAATGTGATCCATGATGTCGCCAGCGGGTGCCTCGCGCCGATCT
GCCTGCCCGTCTTGCACCGAATGCATAACGACGAGTTTGGCAGATGATTTCGCCAATTGCGGATAGAACG
CAGCGTCTGGAAAACCGCGAATATCATTGAGATAGGCCACACCACGCGACAAGGCATAGGCTTGCGTCGC
GGGTTGATAACTGTCGAGCGAGACGGGAATGCCATCTGCCTTGAGCGCGTCCAGCACCGGCGCGATACGC
TCGATTTCTGTGTCGGACGAAACAGGCGCGGCGTCGGGGTTGCTGGAT
>contig10 blaOXA_internal_stop >NZ_CP008798.1 Klebsiella pneumoniae subsp. pneumoniae KPNIH24 plasmid pKPC-484, complete sequence 44200-45800
TTGCTCTGCTCAAACGCGAAGGCCGGTGCCCGTCTGACGTTGAACACCGACAGATTAAGT
ACCGGAACAACGTGATTGAATGCGATCATGGCAAACTGAAACGGATAATCGGCGCCACGC
TGGGATTTAAATCCATGAAGACGGCTTACGCCACCATCAAAGGTATTGAGGTGATGCGTG
CACTACGCAAAGGCCAGGCCTCAGCATTTTATTATGGTGATCCCCTGGGCGAAATGCGCC
TGGTAAGCAGAGTTTTTGAAATGTAAGGCCTTTGAATAAGACAAAAGGCTGCCTCATCGC
TAACTTTGCAACAGTGCCAGGCAGGCTTATCTTGGACAAGAAGATCGCTTGGCCTCGCGC
GCAGATCAGTTGGAAGAATTTGTTCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGC
AAATAATGTCTAAAACAAAGTTATGCACCTATTAAGCGCACAGCGGAGCAATGAAGGATA
CCTTGATGAAAAAAATTTTGCTGCTGCATATGTTGGTGTTCGTTTCCGCCACTCTCCCAA
TCAGTTCCGTGGCTTCTGATGAGGTTGAAACGCTTAAATGCACCATCATCGCAGACGCCA
TTACCGGAAATACCTTATATGAGACCGGAGAATGTGCCCGTCGTGTGTCTCCGTGCTCGT
CTTTTAAACTTCCATTGGCAATCATGGGGTTTGATAGTGGAATCTTGCAGTCGCCAAAAT
CACCTACGTGGGAATTGAAGCCGGAATACAACCCGTCTCCGAGAGATCGCACATACAAAC
AAGTCTATCCGGCGCTATGGCAAAGCGACTCTGTTGTCTAGTTCTCGCAGCAATTAACAA
GCCGTCTGGGAGTTGATCGGTTCACGGAATACGTAAAGAAATTTGAGTACGGTAATCAAG
ATGTTTCCGGTGACTCGGGGAAGCATAACGGCTTGACCCAGTCATGGCTGATGTCGTCGC
TCACCATATCTCCCAAGGAGCAAATTCAGTTTCTTCTACGCTTTGTCGCGCATAAGCTGC
CTGTATCCGAAGCGGCTTATGACATGGCGTATGCCACAATCCCGCAGTACCAGGCAGCCG
AAGGATGGGCTGTACATGGAAAAAGCGGCAGCGGCTGGCTTCGGGACAATAACGGCAAGA
TAAATGAAAGTCGTCCGCAGGGCTGGTTCGTGGGCTGGGCTGAAAAAAACGGACGGCAAG
TTGTTTTCGCCCGATTGGAAATAGGAAAGGAAAAGTCCGATATTCCCGGCGGGTCTAAAG
CACGAGAGGATATTCTCGTGGAATTACCCGTGTTGATGGGTAACAAATGATATGTGGCGT
CATCGAGAGCAGATGCATAACCCTGCGCTCGAGCGGACCTCGCGCATAAAGCCGCGCGAG
TCCGCTCACCTTGAACGTTAGATGCACTAAGCACATAATTGCTCACAGCCAAACTATCAG
GTCAAGTCTGCTTTTATTATTTTTAAGCGTGCATAATAAGCCCTACACAAATTGGGAGAT
ATATCATGAAAAGAGTTTGATGCTCAGGGTGTAGCGGTTCGGTTTATTGACGACGGGATC
AGTACCGACGGTGATATGGGGCAAATGGTGGTCACCATCCT
>contig11 blaTEM divergent, with internal stop codon
AACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTTAAGATACAATAACCCTAATAA
ATGCTTCAATAATATTGAAAAAGGAAGAGTATAAGTATTTAACATTTCCGTGTCGCCCTTATTCCCTTTT
TTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCA
GTTGGGTGCACGAGTGAATTACATCGAACTGGATCTCAACAGTGGTAAGATCCTTGAGAGTTTTCGCCCC
GAAGAACGTTTTCCAATGATGAGCACTTTTAAAGTTCTGCTATGTGGCGCGGTATTATCTTGTGTTGACG
CCGGGCAAGAGCAACTCGGTCGCAGTATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCAC
AGAAAAGCATCTTACGGATGGCATGACACTTAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAAC
ACTGCGGCCAACTTACTTCTGACAACGATCGGAGGACCGAAGGAGCTAACCGCTTAATTGCACAACATAG
GGGATCATGTAACTCGCCTTGATCGTCCGGAACCGGAGCTGTATGAAGTTATACCAAACGACGAGCGTGA
CACCACGATGCCTGCAGCAATAACAACAACGAAGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCT
TCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGTAGGATTATTTCTGCGCTCGGCCCTTC
CGGCTGGCTGGTTTATTGCTGATAAATCTGGAGGGGGTGAGCGTGGGTCTCACGGTATCATTGCAGCACT
GGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTATACGACGAGGAGTCAGGCAATTATGGATGAA
CGAAATAGACAGATCGCTGAGATAGGTGCCTCATTGATTAGGCATTGGTAACTGTCAGACCAAGTTTACT
CATA
>contig12 qacR test for blast rule NBR007712 300492196 21742-21176 plus 70 upstream and downstream
AACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTTAAGATACAATAACCCTAATAA
atgaaAttgaaagataaaatactaggtgtcgcaaaggaattatttataaaaaatggatataatgccactactactggaga
aattgttaaattatcagaaagtagtaaagggaatctttattatcactttaaaacaaaagaaaatctatttttagaaattt
taaatatagaagaatctaaatggcaagaacagtggaaaaaggaacaaatcaaatgtaaaactaatagagaaaaattttat
ttatataatgaactatctttaacaaccgaatactattatccacttcaaaacgcaataattgaattttacactgaatatta
taaaactaatagcattaatgaaaaaatgaataaattagaaaacaaatatatagatgcttatcatgtaatttttaaggagg
gtaatttaaatggcgaatggtgtattaatgatgttaatgctgttagtaaaatagcagcaaacgctgttaatggaattgtt
acctttacacatgaacaaaatattaatgaaagaattaaacttatgaacaagttctctcaaatttttttaaatggacttag
taaataa
AACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTTAAGATACAATAACCCTAATAA
>contig13 arsR-suppressed-in-escherichia and emrD3-suppressed-in-vibrio 1 NG_065418(1-268)
atgaagacgaagccttctctctggttgatggtgattatgttgatgtttccacaaatcgtcgaaaccatctatagcccggtgttgggctctattgcgcggtcattttcggtgagtgatgcccaagccgctcaaaccttgtcggtctattttttggcttttgcattgggagtggtgatatggggagtactcgcggataaatgggggcgtcggcctactatgttggtgggcctactgatttacgggagcgctacatttatcgcaatgcagacagacagtttcactatcttgatgttagcacgagtattcagcgcctttggtatcgctgtcggttccgtggtaacgcaaactattttacgcgatgtgttcagtggtcatgaactgagaaaagtttttagtttaatggggataggtatatctataagcccagtgctagggatgttgcttggtgggcagttagcgtttgcaggtgggcatcaattagtttttctggcgctattttttatagctctggtgctgttcgtttataacttgtgtcagcttcccgaaacgcaacaggtcaagccgaagatcgcattgggttgtttagtggctcgaatgtttaaagatagacaagtgctgctttcagcactgctagtggcgttatacaacgtggccttattttcttattaccagcttggtgcctttatctttagcgatttggggttagatgcggaacagtttggctatagtggtattgcacttggcctcggtagcttaatcgggagctttcttaacaaaacgttgcttgctaaacaggtgccacagcgtgcgctgcttttactggcagcactgttattaatcatgggaactataggcgtatctttgacgcttgattcgatcggttttgtggccgcaatgatattggttgtgatcgcttatggtatggcgattccgaatatcttgagcactgcactggtggagtataaatcgcaagcagggagtgctggagcgctgtttggcctgctctattatcttttgattggtagtggtttggcgctcacgggtttagtacaacgtttaggtgtcgtgcttctgatgtgcgctggtatcaccttgttggcaaccttagctcgctctagtcacatagcccgtctaccatga
atgtcatttctgttacccatccaattgttcaaaattcttgctgatgaaacccgtctgggcatcgttttactgctcagcga
actgggagagttatgcgtctgcgatctctgcactgctctcgaccagtcgcagcccaagatctcccgccacctggcattgc
tgcgtgaaagcgggctattgctggaccgcaagcaaggtaagtgggttcattaccgcttatcaccgcatattccagcatgg
gcggcgaaaattattgatgaggcctggcgatgtgaacaggaaaaggttcaggcgattgtccgcaacctggctcgacaaaa
ctgttccggggacagtaagaacatttgcagttaa
>contig14 pmrB_C84R twice, then pmrB wildtype >NC_000913.3:c4333272-4332181 Escherichia coli str. K-12 substr. MG1655, complete genome
ATGCATTTTCTGCGCCGACCAATATCGCTGCGCCAACGGCTGATATTGACCATCGGGGCCATTTTGTTGGTGTTTGAGCTGATCAGCGTCTTCTGGCTATGGCATGAAAGTACCGAGCAGATTCAGCTGTTTGAGCAGGCGCTACGCGACAATCGCAACAACGATCGCCACATCATGCGTGAGATCCGCGAGGCGGTCGCCAGCCTGATTGTCCCCGGCGTCTTTATGGTCAGCCTGACGCTATTTATCCGCTATCAGGCGGTACGCCGCATCACCCGCCCGCTGGCGGAGCTGCAAAAAGAGCTGGAAGCGCGCACCGCCGACAACTTAACGCCCATTGCCATTCACAGCGCCACCCTCGAAATCGAAGCGGTGGTTTCGGCGTTAAACGATCTGGTCAGTCGCCTGACCAGCACGCTGGATAACGAAAGGTTGTTTACCGCTGACGTCGCGCACGAACTGCGAACGCCACTGGCGGGGGTGCGTTTGCATCTGGAACTGCTGGCGAAAACGCATCACATTGATGTAGCACCGTTAGTGGCACGGCTTGATCAGATGATGGAGAGCGTCTCCCAGCTGCTGCAACTGGCGCGTGCCGGACAGTCATTTTCTTCCGGTAATTATCAACATGTAAAACTGCTGGAAGATGTCATTCTCCCCTCGTATGACGAACTCAGTACCATGCTCGACCAGCGACAGCAAACCCTGCTATTGCCAGAGAGCGCCGCCGACATCACCGTTCAGGGTGATGCAACCCTGCTGCGGATGTTATTGCGAAACCTGGTAGAAAACGCCCATCGTTACAGCCCGCAAGGCAGCAACATTATGATTAAGCTGCAAGAAGATGACGGAGCGGTCATGGCAGTTGAAGATGAAGGACCAGGTATTGATGAGAGTAAATGCGGGGAGTTGAGTAAAGCGTTTGTACGTATGGACAGCCGTTATGGCGGGATTGGTCTGGGGTTAAGTATTGTCAGCCGCATTACACAGTTGCATCACGGGCAGTTTTTCCTGCAAAACCGGCAAGAGACTTCCGGCACGCGGGCCTGGGTACGGCTGAAGAAAGATCAGTACGTGGCAAACCAGATATAA
ATGCATTTTCTGCGCCGACCAATATCGCTGCGCCAACGGCTGATATTGACCATCGGGGCCATTTTGTTGGTGTTTGAGCTGATCAGCGTCTTCTGGCTATGGCATGAAAGTACCGAGCAGATTCAGCTGTTTGAGCAGGCGCTACGCGACAATCGCAACAACGATCGCCACATCATGCGTGAGATCCGCGAGGCGGTCGCCAGCCTGATTGTCCCCGGCGTCTTTATGGTCAGCCTGACGCTATTTATCCGCTATCAGGCGGTACGCCGCATCACCCGCCCGCTGGCGGAGCTGCAAAAAGAGCTGGAAGCGCGCACCGCCGACAACTTAACGCCCATTGCCATTCACAGCGCCACCCTCGAAATCGAAGCGGTGGTTTCGGCGTTAAACGATCTGGTCAGTCGCCTGACCAGCACGCTGGATAACGAAAGGTTGTTTACCGCTGACGTCGCGCACGAACTGCGAACGCCACTGGCGGGGGTGCGTTTGCATCTGGAACTGCTGGCGAAAACGCATCACATTGATGTAGCACCGTTAGTGGCACGGCTTGATCAGATGATGGAGAGCGTCTCCCAGCTGCTGCAACTGGCGCGTGCCGGACAGTCATTTTCTTCCGGTAATTATCAACATGTAAAACTGCTGGAAGATGTCATTCTCCCCTCGTATGACGAACTCAGTACCATGCTCGACCAGCGACAGCAAACCCTGCTATTGCCAGAGAGCGCCGCCGACATCACCGTTCAGGGTGATGCAACCCTGCTGCGGATGTTATTGCGAAACCTGGTAGAAAACGCCCATCGTTACAGCCCGCAAGGCAGCAACATTATGATTAAGCTGCAAGAAGATGACGGAGCGGTCATGGCAGTTGAAGATGAAGGACCAGGTATTGATGAGAGTAAATGCGGGGAGTTGAGTAAAGCGTTTGTACGTATGGACAGCCGTTATGGCGGGATTGGTCTGGGGTTAAGTATTGTCAGCCGCATTACACAGTTGCATCACGGGCAGTTTTTCCTGCAAAACCGGCAAGAGACTTCCGGCACGCGGGCCTGGGTACGGCTGAAGAAAGATCAGTACGTGGCAAACCAGATATAA
ATGCATTTTCTGCGCCGACCAATATCGCTGCGCCAACGGCTGATATTGACCATCGGGGCCATTTTGTTGG
TGTTTGAGCTGATCAGCGTCTTCTGGCTATGGCATGAAAGTACCGAGCAGATTCAGCTGTTTGAGCAGGC
GCTACGCGACAATCGCAACAACGATCGCCACATCATGCGTGAGATCCGCGAGGCGGTCGCCAGCCTGATT
GTCCCCGGCGTCTTTATGGTCAGCCTGACGCTATTTATCTGCTATCAGGCGGTACGCCGCATCACCCGCC
CGCTGGCGGAGCTGCAAAAAGAGCTGGAAGCGCGCACCGCCGACAACTTAACGCCCATTGCCATTCACAG
CGCCACCCTCGAAATCGAAGCGGTGGTTTCGGCGTTAAACGATCTGGTCAGTCGCCTGACCAGCACGCTG
GATAACGAAAGGTTGTTTACCGCTGACGTCGCGCACGAACTGCGAACGCCACTGGCGGGGGTGCGTTTGC
ATCTGGAACTGCTGGCGAAAACGCATCACATTGATGTAGCACCGTTAGTGGCACGGCTTGATCAGATGAT
GGAGAGCGTCTCCCAGCTGCTGCAACTGGCGCGTGCCGGACAGTCATTTTCTTCCGGTAATTATCAACAT
GTAAAACTGCTGGAAGATGTCATTCTCCCCTCGTATGACGAACTCAGTACCATGCTCGACCAGCGACAGC
AAACCCTGCTATTGCCAGAGAGCGCCGCCGACATCACCGTTCAGGGTGATGCAACCCTGCTGCGGATGTT
ATTGCGAAACCTGGTAGAAAACGCCCATCGTTACAGCCCGCAAGGCAGCAACATTATGATTAAGCTGCAA
GAAGATGACGGAGCGGTCATGGCAGTTGAAGATGAAGGACCAGGTATTGATGAGAGTAAATGCGGGGAGT
TGAGTAAAGCGTTTGTACGTATGGACAGCCGTTATGGCGGGATTGGTCTGGGGTTAAGTATTGTCAGCCG
CATTACACAGTTGCATCACGGGCAGTTTTTCCTGCAAAACCGGCAAGAGACTTCCGGCACGCGGGCCTGG
GTACGGCTGAAGAAAGATCAGTACGTGGCAAACCAGATATAA
>contig15 23S_A2058T then 23S_A2058A (wildtype) NC_004431.1:237160-240064
ggttaagcgactaagcgtacacggtggatgccctggcagtcagaggcgatgaaggacgtgctaatctgcgataagcgtcggtaaggtgatatgaaccgttataaccggcgatttccgaatggggaaacccagtgtgtttcgacacactatcattaactgaatccataggttaatgaggcgaaccgggggaactgaaacatctaagtaccccgaggaaaagaaatcaaccgagattcccccagtagcggcgagcgaacggggaggagcccagagcctgaatcagtgtgtgtgttagtggaagcgtctggaaaggcgcgcgatacagggtgacagccccgtacacaaaaatgcacatgctgtgagctcgatgagtagggcgggacacgtggtatcctgtctgaatatggggggaccatcctccaaggctaaatactcctgactgaccgatagtgaaccagtaccgtgagggaaaggcgaaaagaaccccggcgaggggagtgaaaaagaacctgaaaccgtgtacgtacaagcagtgggagcatgcttaggcgtgtgactgcgtaccttttgtataatgggtcagcgacttatattctgtagcaaggttaaccgaataggggagccgaagggaaaccgagtcttaactgggcgttaagttgcagggtatagacccgaaacccggtgatctagccatgggcaggttgaaggttgggtaacactaactggaggaccgaaccgactaatgttgaaaaattagcggatgacttgtggctgggggtgaaaggccaatcaaaccgggagatagctggttctccccgaaagctatttaggtagcgcctcgtgaactcatctccgggggtagagcactgtttcggcaagggggtcatcccgacttaccaacccgatgcaaactgcgaataccggagaatgttatcacgggagacacacggcgggtgctaacgtccgtcgngaagagggaaacaacccagaccgccagctaaggtcccaaagtcatggttaagtgggaaacgatgtgggaaggcccagacagccaggatgttggcttagaagcagccatcatttaaagaaagcgtaatagctcactggtcgagtcggcctgcgcggaagatgtaacggggctaaaccatgcaccgaagctgcggcagcgacgcttatgcgttgttgggtaggggagcgttctgtaagcctgtgaaggtgtactgtgaggtatgctggaggtatcagaagtgcgaatgctgacataagtaacgataaagcgggtgaaaagcccgctcgccggaagaccaagggttcctgtccaacgttaatcggggcagggtgagtcgacccctaaggcgaggccgaaaggcgtagtcgatgggaaacaggttaatattcctgtacttggtgttactgcgaaggggggacggagaaggctatgttggccgggcgacggttgtcccggtttaagcgtgtaggctggttttccaggcaaatccggaaaatcaaggctgaggcgtgatgacgaggcactacggtgctgaagcaacaaatgccctgcttccaggaaaagcctctaagcatcaggtaacatcaaatcgtaccccaaaccgacacaggtggtcaggtagagaataccaaggcgcttgagagaactcgggtgaaggaactaggcaaaatggtgccgtaacttcgggagaaggcacgctgatatgtaggtgaagcgacttgctcgtggagctgaaatcagtcgaagataccagctggctgcaactgtttattaaaaacacagcactgtgcaaacacgaaagtggacgtatacggtgtgacgcctgcccggtgccggaaggttaattgatggggttagcgcaagcgaagctcttgatcgaagccccggtaaacggcggccgtaactataacggtcctaaggtagcgaaattccttgtcgggtaagttccgacctgcacgaatggcgtaatgatggccaggctgtctccacccgagactcagtgaaattgaactcgctgtgaagatgcagtgtacccgcggcaagacggTaagaccccgtgaacctttactatagcttgacactgaacattgagccttgatgtgtaggataggtgggaggctttgaagtgtggacgccagtctgcatggagccgaccttgaaataccaccctttaatgtttgatgttctaacgttgacccgtaatccgggttgcggacagtgtctggtgggtagtttgactggggcggtctcctcctaaagagtaacggaggagcacgaaggttggctaatcctggtcggacatcaggaggttagtgcaatggcataagccagcttgactgcgagcgtgacggcgcgagcaggtgcgaaagcaggtcatagtgatccggtggttctgaatggaagggccatcgctcaacggataaaaggtactccggggataacaggctgataccgcccaagagttcatatcgacggcggtgtttggcacctcgatgtcggctcatcacatcctggggctgaagtaggtcccaagggtatggctgttcgccatttaaagtggtacgcgagctgggtttagaacgtcgtgagacagttcggtccctatctgccgtgggcgctggagaactgaggggggctgctcctagtacgagaggaccggagtggacgcatcactggtgttcgggttgtcatgccaatggcactgcccggtagctaaatgcggaagagataagtgctgaaagcatctaagcacgaaacttgccccgagatgagttctccctgactccttgagggtcctgaaggaacgttgaagacgacgacgttgataggccgggtgtgtaagcgcagcgatgcgttgagctaaccggtactaatgaaccgtgaggcttaacctta
ggttaagcgactaagcgtacacggtggatgccctggcagtcagaggcgatgaaggacgtgctaatctgcgataagcgtcg
gtaaggtgatatgaaccgttataaccggcgatttccgaatggggaaacccagtgtgtttcgacacactatcattaactga
atccataggttaatgaggcgaaccgggggaactgaaacatctaagtaccccgaggaaaagaaatcaaccgagattccccc
agtagcggcgagcgaacggggaggagcccagagcctgaatcagtgtgtgtgttagtggaagcgtctggaaaggcgcgcga
tacagggtgacagccccgtacacaaaaatgcacatgctgtgagctcgatgagtagggcgggacacgtggtatcctgtctg
aatatggggggaccatcctccaaggctaaatactcctgactgaccgatagtgaaccagtaccgtgagggaaaggcgaaaa
gaaccccggcgaggggagtgaaaaagaacctgaaaccgtgtacgtacaagcagtgggagcatgcttaggcgtgtgactgc
gtaccttttgtataatgggtcagcgacttatattctgtagcaaggttaaccgaataggggagccgaagggaaaccgagtc
ttaactgggcgttaagttgcagggtatagacccgaaacccggtgatctagccatgggcaggttgaaggttgggtaacact
aactggaggaccgaaccgactaatgttgaaaaattagcggatgacttgtggctgggggtgaaaggccaatcaaaccggga
gatagctggttctccccgaaagctatttaggtagcgcctcgtgaactcatctccgggggtagagcactgtttcggcaagg
gggtcatcccgacttaccaacccgatgcaaactgcgaataccggagaatgttatcacgggagacacacggcgggtgctaa
cgtccgtcgngaagagggaaacaacccagaccgccagctaaggtcccaaagtcatggttaagtgggaaacgatgtgggaa
ggcccagacagccaggatgttggcttagaagcagccatcatttaaagaaagcgtaatagctcactggtcgagtcggcctg
cgcggaagatgtaacggggctaaaccatgcaccgaagctgcggcagcgacgcttatgcgttgttgggtaggggagcgttc
tgtaagcctgtgaaggtgtactgtgaggtatgctggaggtatcagaagtgcgaatgctgacataagtaacgataaagcgg
gtgaaaagcccgctcgccggaagaccaagggttcctgtccaacgttaatcggggcagggtgagtcgacccctaaggcgag
gccgaaaggcgtagtcgatgggaaacaggttaatattcctgtacttggtgttactgcgaaggggggacggagaaggctat
gttggccgggcgacggttgtcccggtttaagcgtgtaggctggttttccaggcaaatccggaaaatcaaggctgaggcgt
gatgacgaggcactacggtgctgaagcaacaaatgccctgcttccaggaaaagcctctaagcatcaggtaacatcaaatc
gtaccccaaaccgacacaggtggtcaggtagagaataccaaggcgcttgagagaactcgggtgaaggaactaggcaaaat
ggtgccgtaacttcgggagaaggcacgctgatatgtaggtgaagcgacttgctcgtggagctgaaatcagtcgaagatac
cagctggctgcaactgtttattaaaaacacagcactgtgcaaacacgaaagtggacgtatacggtgtgacgcctgcccgg
tgccggaaggttaattgatggggttagcgcaagcgaagctcttgatcgaagccccggtaaacggcggccgtaactataac
ggtcctaaggtagcgaaattccttgtcgggtaagttccgacctgcacgaatggcgtaatgatggccaggctgtctccacc
cgagactcagtgaaattgaactcgctgtgaagatgcagtgtacccgcggcaagacggaaagaccccgtgaacctttacta
tagcttgacactgaacattgagccttgatgtgtaggataggtgggaggctttgaagtgtggacgccagtctgcatggagc
cgaccttgaaataccaccctttaatgtttgatgttctaacgttgacccgtaatccgggttgcggacagtgtctggtgggt
agtttgactggggcggtctcctcctaaagagtaacggaggagcacgaaggttggctaatcctggtcggacatcaggaggt
tagtgcaatggcataagccagcttgactgcgagcgtgacggcgcgagcaggtgcgaaagcaggtcatagtgatccggtgg
ttctgaatggaagggccatcgctcaacggataaaaggtactccggggataacaggctgataccgcccaagagttcatatc
gacggcggtgtttggcacctcgatgtcggctcatcacatcctggggctgaagtaggtcccaagggtatggctgttcgcca
tttaaagtggtacgcgagctgggtttagaacgtcgtgagacagttcggtccctatctgccgtgggcgctggagaactgag
gggggctgctcctagtacgagaggaccggagtggacgcatcactggtgttcgggttgtcatgccaatggcactgcccggt
agctaaatgcggaagagataagtgctgaaagcatctaagcacgaaacttgccccgagatgagttctccctgactccttga
gggtcctgaaggaacgttgaagacgacgacgttgataggccgggtgtgtaagcgcagcgatgcgttgagctaaccggtac
taatgaaccgtgaggcttaacctta
>contig16 nfsA_K141STOP_R15C
ATGACGCCAACCATTGAACTTATTTGTGGCCATCGCTCCATTTGCCATTTCACTGATGAACCCATTTCCGAAGCGCAGCGTGAGGCGATTATTAACAGCGCCCGTGCGACGTCCAGTTCCAGTTTTTTGCAGTACAGTAGCATTATTCGCATTACCGACAAAGCGTTACGTGAAGAACTGGTGACGCTGACCGGCGGGCAAAAACACGTAGCGCAAGCGGCGGAGTTCTGGGTGTTCTGTGCCGACTTTAACCGCCATTTACAGATCTGTCCGGATGCTCAGCTCGGCCTGGCGGAACAACTGTTGCTCGGTGTCGTTGATACGGCAATGATGGCGCAGAATGCATTAATCGCAGCGGAATCGCTGGGATTGGGCGGGGTATATATCGGCGGCCTGCGCAATAATATTGAAGCGGTGACGTAACTGCTTAAATTACCGCAGCATGTTCTGCCGCTGTTTGGGCTGTGCCTTGGCTGGCCTGCGGATAATCCGGATCTTAAGCCGCGTTTACCGGCCTCCATTTTGGTGCATGAAAACAGCTATCAACCGCTGGATAAAGGCGCACTGGCGCAGTATGACGAGCAACTGGCGGAATATTACCTCACCCGTGGCAGCAATAATCGCCGGGATACCTGGAGCGATCATATCCGCCGAACAATCATTAAAGAAAGCCGCCCATTTATTCTGGATTATTTGCACAAACAGGGTTGGGCGACGCGCTAA
>contig17 ampC_T-13GTT Escherichia -13GTT CP041538.1:1149245-1149489 Escherichia coli strain 73 chromosome
TGGCTGCTATCCTGACAGTTGTCACGCTGATTGGTGTCGTgtTACAATCTAACGCATCGCCAATGTAAATCC
GGCCCGCCTATGGCGGGCCGTTTTGTATGGAAACCAGACCCTATGTTCAAAACGACGCTCTGCACCTTAT
TAATTACCGCCTCTTGCTCCACATTTGCCGCCCCTCAACAAATCAACGATATTGTGCATCGCACAATTAC
CCCGCTTATAGAGCAACAAAAGATCCCCGGTATGG