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CHANGELOG.txt
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CHANGELOG.txt
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Master:
ph5
* fixed errors in entry_points.py that prevented apps from executing.
* fixed: seg2toph5, ph5toevt.
* Deleted: ph5view (doesn't compile, was a W.I.P. left to wither)
* made pep8 compliant
* update all modules to use a standardized logger (issue #213)
* cleanup comments and remove commented out code (issue #216)
* replace deprecated optparse with argparse module.
* update ph5 to better install c requirements
ph5.utilities.ph5
* add helpfile to utilities folder. Have not added pointer in setup.py as yet.
* Typing ph5 shows user the choices for help information.
* Usage: ph5 pforma (lists info about pforma)https://github.com/PIC-IRIS/PH5/pull/new/helpfile
ph5.clients.ph5toms
* added option to change file naming scheme
* add day volume cuts
* add cut length to ph5toms for webservices
* Fix bug causing duplicate data to be written (issue #264)
* Fix bug causing data to not be written in special cases at the start of the data in PH5
* Slight change to naming output on command line for more consistency
* No longer adds extra sample at end of cut
* Fix substring issue
* Add ph5toms support for the web service SEG-Y timeseries data format.
* Fix bug where starttime offset was applied after calculating the end time of a shot gather request
* Add web service hooks for reciever gather request type
* Correctly write all requested channel components (issue #374)
ph5.utilities.report_gen
* add report_gen entry point to setup.py
ph5.utilities.pformagui
* added North South designation to pforma
* Displayed current utm zone (issue #234)
ph5.utilities.segdtoph5
* Fixed bug causing pforma to finish correctly on node (issue #233)
* fixed bug in utmzone processing
ph5.core.experiment
* fixed bug found by Natalie (issue #231)
* fix fast offset_table reading (issue #280)
ph5.clients.tests.test_ph5toms
* fixed bug in stationCut call
ph5.clients.ph5tostationxml
* Limit number of asynchronous processes
* Remove storage format from the sxml channel level to be compatible with sxml version 1.1
* ph5tostationxml now correctly handles stations with multiple deployments (issue #318)
* Add a new custom iris namespace attribute called iris:PH5ReportNum to the network StationXML element
* Remove the report number from the alternateCode value in the network StationXML element
* Round latitude and longitude to 6 decimal places in stationxml to match SEED maximum
* Round elevation to 1 decimal place in stationxml to match SEED maximum
* fix incorrectly retrieving network time
ph5.clients.ph5availability
* New client for returning timeseries availability information
ph5.utilities.ph5validate
* add data time checking
* fix incorrectly detecting data between different deploy/pickup times
* detecting repeated stations
ph5.utilities.test.test_ph5validate
* unittest for ph5validate
ph5.utilities.sort_kef_gen.py
* add -o option for file output
ph5.utilities.time_kef_gen.py
* add -o option for file output
ph5.utilities.tabletokef.py
* add -o option for file output
ph5.utilities.report_gen
* fix crash on no event table (issue #219)
ph5.utilities.dumpfair
* fix piping bug (issue #270)
ph5.utilities.seg2toph5
* fix bug missing variable
* Make compatible for pforma
ph5.utilities.pforma_io
* add seg2 to pforma
* fix bug that duplicate index_t and array_t when copy tables from A/master.ph5 to Sigma/master.ph5
ph5.utilities.125atoph5
* fix pforma support after LOGGER change
ph5.utilities.130toph5
* fix pforma support after LOGGER change
ph5.clients.ph5torec
* fix info level logging and remove global variables
ph5.clients.ph5toevt
* fix info level logging and remove global variables
ph5.utilities.obspytoph5
* new tool for loading obspy data in to ph5
ph5.utilities.metadatatoph5
* new tool for loading stationxml and dataless SEED
ph5.utilities.tests.test_metadatatoph5
* unit tests for metadatatoph5; Stop sending log to screen; Apply tmpdir from test_base; Use testfixture to capture output; Use os.path.join for path
ph5.utilities.tests.test_obspytoph5
* unit tests for obspytoph5; Stop sending log to screen; Apply tmpdir from test_base; Use testfixture to capture output; Use os.path.join for path
ph5.core.tests.test_ph5api
* unit tests for ph5api; Stop sending log to screen;
ph5.core.ph5api
* fix ph5api cut sometimes returns too many samples (issue #298)
* fix for get_availability returning incomplete results
ph5.entry_points
* creates a dictionary, keys are names of scripts,
values are (1) simple description,
(2) entry points for use by setup.
ph5.help
* calls entry_points to print the short descriptions in alpha-order.
environment.yml
* removed unused dependencies and added pykml as a dependency
ph5.core.test.test_base
* use TempDirTestCase to handle temporary directory that keeps ph5 and log files created in unittests, this directory will be deleted if test successful or remained if test failed
* use LogTestCase to disable log to be written to console in unittests, remove all handlers created in unittests except the one to capture log messages
* add initialize_ex for creating ph5 experiment object
* add kef_to_ph5 to add metadata table, including das_t, from kef file to ph5
ph5.clients.test.test_ph5availability
* Unittest: Stop sending log to screen; Apply testfixtures to capture output and log; Apply tmpdir from test_base; Use os.path.join for path
ph5.core.tests.test_segd2ph5
* Unittest: Stop sending log to screen; Apply tmpdir from test_base; Use os.path.join for path
v4.1.2:
ph5.utilities.ph5validate
* new functionality
ph5.core.ph5api
* fix cut method
ph5.clients.ph5torec
* Fixed bug not properly applying reduction velocity
-ph5.utilities.resp_load
* handle missing response table data gracefully
-ph5.utilities.keftocsv
* new utility
-ph5.utilities.csvtokef
* new utility
-ph5.utilities.ph5tostationxml
* Fixed bug causing arrays with same station id_s to be filtered out
* add descriptive error message and skip master with no experiment
-ph5.utilities.kefedit
Fixed not being able to save directly to PH5 (issue #193)
-ph5.clients.ph5view
* Handle node > 3 channel bug
-ph5.core.segd2ph5
* fix for reading SEG-D where the number of channel sets exceeds the number of channels (component)
-ph5.clients.ph5view
* Better handling of experiments with missing tables
-ph5.clients.ph5toexml
* Remove new line from geocsv field_unit header line
-ph5.utilities.kefedit
* Fix bugs caused when loading PH5 experiment without offset tables
-ph5.clients.ph5tostationxml
* Address issue #181
* print to stdout by default
-ph5.clients.ph5toms
* Add ph5toms support for the web service GeoCSV timeseries data format.
v4.1.1:
-ph5.clients.ph5toexml
* Fix case where station does not have a key of 1
* Add geocsv format to ph5toexml that is equivalent to the shottext format
* No longer require the user to enter a network or report number
* No longer print to a file by default, but still provide an option. Instead print the event data to stdout by default.
* No longer show users a stack trace. Instead show a shortened error message.
-ph5.clients.ph5toms
* Fix ph5toms not returning data
* Fix bug that caused ph5toms to crash when passed an empty DAS_t after filtering
-ph5.utilities.ph5_validate
* New functionality for checking stations
-ph5.utilities.kef2kml
* Fix bug reading kef
-ph5.utilities.kefedit
* Fix bug reading kef
v4.1.0:
-ph5.utilities.resp_load
* resp_load now handles nuking and loading tables for the user
-ph5.utilities.ph5validate
* New validation utility
-ph5.utilities.pforma
* Skip files that do not exist
-ph5.utilities.nuke_table
* Remove Oppenheimer/Bhagavad Gita references.
-setup.py
* Add delete_table as alias for nuke_table
-ph5.utilities.dumpfair
* Print trace values
-ph5.utilities.time_kef_gen
* Fixed bug caused by attemtping to run time_kef_gen on node data
-ph5.clients.ph5tostationxml
* Always takes in to account deployments
-ph5.utilities.nuke_table
* Nuke_table now creates file back ups
-ph5.clients.ph5toevt
* Updated to also accept external shot files
-ph5.clients.ph5torec
* Updated to also accept external shot files
-ph5.core.external_file
* new core component for external array or shot files
-ph5.clients.ph5toms
* ph5toms now uses multiprocessing
-ph5.clients.ph5toms (issue #127)
* Updated ph5toms to write SAC header values properly
-ph5.clients.ph5toevt
* Updated to check the array table for response_n_i
-ph5.clients.ph5torec
* Updated to check the array table for response_n_i
-ph5.clients.ph5tostationxml
* Added SACPZ and stationtxt to command line output option
-ph5.core.experiment
* Add expectedrows when creating tables
-ph5.core.ph5utils
* Doy_breakup can now accept variable time lengths for breakup. Default is 1 day
-ph5.clients.ph5tostationxml
* Fixed array number bug
* Use Hash for station comparison to speed up read_stations()
-ph5.clients.ph5toms
* Fixed array number bug
* Added LENGTH global variable to adjust file cuts
-ph5.core.ph5api
* Enhancement in cut to be able to pass the das_t instead of rereading the das_t in cut
-ph5.core.ph5api (issue #141)
* Addressed bug not reading all data of channels < 1 sps
-ph5.utilities.segd2ph5 (issue #138)
* Added SEED station name to array creation
-ph5.utilities.resp_load
* Fix array parse bug
-ph5.utilities.resp_load (issue #114)
* New software added
v4.0.4:
-ph5.core.ph5api(issue #134)
* fixes error catching in response table function
-setup.py
* Standardized GUI and command line names
-ph5.utilities.pforma_io
* Fix renaming of cl programs
-ph5.utilities.set_n_i_response
* Fix renaming of cl programs
-ph5.clients.ph5tostationxml (issue #126)
* Only add a network, station, or channel to inventory if it hasn;t already been added
-ph5.utilities.dumpsgy
* Fix issues caused by adding main procedure
-ph5.utilities.ph5_merge_helper
* Fix issues caused by adding main procedure
-ph5.utilities.fix_3chan_texan
* Fix issues caused by adding main procedure
-ph5.utilities.index_offset_t
* Make offset table name required
-ph5.utilities.meta_data_gen
* Fix issues caused by adding main procedure
-ph5.utilities.unsimpleton
* Check for failure to create hard link
v4.0.3:
-ph5.clients.ph5tostationxml (issue #111)
* ph5tostationxml accepts list of requests for given experiment
-ph5.clients.ph5torec
* Write node ID to log file
-ph5.clients.ph5toevt
* Write node ID to log file
-ph5.clients.ph5view.ph5_viewer (issue #116)
* if no config file is present create a default config file
v4.0.2
-ph5.clients.ph5toms (issue #100)
* Fixed memory leak bug and reduced memory usage
-ph5.clients.ph5tostationxml (issue #107)
* added receiver-id to obspy inventory and added an extra attribute at the channel level
-ph5.clients.ph5toexml
* added to setup.py
v4.0.1
- ph5.clients.ph5tostationxml
* updated to work with latest obspy response code
v4.0.0
- Initial Release