Update plotting functions

manaakiwhenua · Feb 24, 2025 · 0366470 · 0366470
1 parent 5400214
commit 0366470
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Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/xgb.cv.fit.scatterplot.r b/xgb.cv.fit.scatterplot.r
@@ -8,7 +8,7 @@ xgbm.cv.fit.scatterplot = function(pred,CVtrain_y,path)
   Title = paste0("Cor = ",Cor)
   Filename = paste0(path,"FitScatterplot.png")
   png(Filename, height = 1600,width = 1600)
-  par(mar = c(10,12,12,2), cex.main = 5,cex.lab = 4.8,cex.axis = 4.6,mgp = c(7,2,0))
+  par(mar = c(10,12,12,8), cex.main = 5,cex.lab = 4.8,cex.axis = 4.6,mgp = c(7,2,0))
   plot(pred~CVtrain_y, main = Title,
           xlab = paste0("Observed response"),ylab = paste0("Fitted response"), pch = NA)
   points(CVtrain_y,pred, cex = 2, col = 1)

diff --git a/xgb.cv.partial.r b/xgb.cv.partial.r
@@ -91,7 +91,7 @@ xgbm.cv.partial = function(cv,Nfolds,CVtrain_x,var,path,CVtrain_y,ResponseName =
   Title = Predictors[var]
   Filename = paste0(path,ResponseName,".",Predictors[var],".partial.png")
   png(Filename,width = 1800, height = 1600)
-  par(mfcol = c(1,1), cex.main = 5, cex.lab = 4.8, cex.axis = 4.6, mar = c(10,12,8,2), 
+  par(mfcol = c(1,1), cex.main = 5, cex.lab = 4.8, cex.axis = 4.6, mar = c(10,12,8,8), 
       mgp = c(7,2,0),font.lab = 2,oma = c(0, 0, 9, 0))
   plot(PartialPreds[,1],PartialPreds[,2], ylim = c(min(PartialPreds[,2]),max(PartialPreds[,2])),pch = NA,
        xlab = Predictors[var], ylab = ResponseName,main = Title)