This repository contains code from:
Mikhail D. Magnitov, Michela Maresca, Noemí Alonso Saiz, Hans Teunissen, Jinhong Dong, Kizhakke M. Sathyan, Luca Braccioli, Michael J. Guertin, Elzo de Wit. ZNF143 is a transcriptional regulator of nuclear-encoded mitochondrial genes that acts independently of looping and CTCF (2024).
We have deposited scripts used to process and analyse sequencing and mass spectrometry data described in the paper. We have also provided extensive details on the re-analysis of publicly available data on ZNF143, which is an essential part of the manuscript.
Raw sequencing and mass spectrometry data from our study can be found in GEO (GSE260914 and GSE271837) and PRIDE (PXD049480) databases.
If you have any questions about the data analysis in the paper or the scripts in the repository, please email m.magnitov[at]nki.nl or e.d.wit[at]nki.nl.