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table_metadata.py
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import copy
from collections import namedtuple
from typing import Iterable, Any, Union, Iterator, Dict, Set # noqa: F401
from databuilder.models.neo4j_csv_serde import (
Neo4jCsvSerializable, NODE_LABEL, NODE_KEY, RELATION_START_KEY, RELATION_END_KEY, RELATION_START_LABEL,
RELATION_END_LABEL, RELATION_TYPE, RELATION_REVERSE_TYPE)
from databuilder.publisher.neo4j_csv_publisher import UNQUOTED_SUFFIX
DESCRIPTION_NODE_LABEL = 'Description'
class TagMetadata:
TAG_NODE_LABEL = 'Tag'
TAG_KEY_FORMAT = '{tag}'
TAG_TYPE = 'tag_type'
def __init__(self,
name, # type: str,
tag_type='default', # type: str
):
self._name = name
self._tag_type = tag_type
@staticmethod
def get_tag_key(name):
# type: (str) -> str
if not name:
return ''
return TagMetadata.TAG_KEY_FORMAT.format(tag=name)
class ColumnMetadata:
COLUMN_NODE_LABEL = 'Column'
COLUMN_KEY_FORMAT = '{db}://{cluster}.{schema}/{tbl}/{col}'
COLUMN_NAME = 'name'
COLUMN_TYPE = 'type'
COLUMN_ORDER = 'sort_order'
COLUMN_DESCRIPTION = 'description'
COLUMN_DESCRIPTION_FORMAT = '{db}://{cluster}.{schema}/{tbl}/{col}/_description'
# pair of nodes makes relationship where name of variable represents order of relationship.
COL_DESCRIPTION_RELATION_TYPE = 'DESCRIPTION'
DESCRIPTION_COL_RELATION_TYPE = 'DESCRIPTION_OF'
# Relation between column and tag
COL_TAG_RELATION_TYPE = 'TAGGED_BY'
TAG_COL_RELATION_TYPE = 'TAG'
def __init__(self,
name, # type: str
description, # type: Union[str, None]
col_type, # type: str
sort_order, # type: int
tags=None, # Union[List[str], None]
):
# type: (...) -> None
"""
TODO: Add stats
:param name:
:param description:
:param col_type:
:param sort_order:
"""
self.name = name
self.description = description
self.type = col_type
self.sort_order = sort_order
self.tags = tags
def __repr__(self):
# type: () -> str
return 'ColumnMetadata({!r}, {!r}, {!r}, {!r})'.format(self.name,
self.description,
self.type,
self.sort_order)
# Tuples for de-dupe purpose on Database, Cluster, Schema. See TableMetadata docstring for more information
NodeTuple = namedtuple('KeyName', ['key', 'name', 'label'])
RelTuple = namedtuple('RelKeys', ['start_label', 'end_label', 'start_key', 'end_key', 'type', 'reverse_type'])
class TableMetadata(Neo4jCsvSerializable):
"""
Table metadata that contains columns. It implements Neo4jCsvSerializable so that it can be serialized to produce
Table, Column and relation of those along with relationship with table and schema. Additionally, it will create
Database, Cluster, and Schema with relastionships between those.
These are being created here as it does not make much sense to have different extraction to produce this. As
database, cluster, schema would be very repititive with low cardinality, it will perform de-dupe so that publisher
won't need to publish same nodes, relationships.
This class can be used for both table and view metadata. If it is a View, is_view=True should be passed in.
"""
TABLE_NODE_LABEL = 'Table'
TABLE_KEY_FORMAT = '{db}://{cluster}.{schema}/{tbl}'
TABLE_NAME = 'name'
IS_VIEW = 'is_view{}'.format(UNQUOTED_SUFFIX) # bool value needs to be unquoted when publish to neo4j
TABLE_DESCRIPTION = 'description'
TABLE_DESCRIPTION_FORMAT = '{db}://{cluster}.{schema}/{tbl}/_description'
TABLE_DESCRIPTION_RELATION_TYPE = 'DESCRIPTION'
DESCRIPTION_TABLE_RELATION_TYPE = 'DESCRIPTION_OF'
DATABASE_NODE_LABEL = 'Database'
DATABASE_KEY_FORMAT = 'database://{db}'
DATABASE_CLUSTER_RELATION_TYPE = 'CLUSTER'
CLUSTER_DATABASE_RELATION_TYPE = 'CLUSTER_OF'
CLUSTER_NODE_LABEL = 'Cluster'
CLUSTER_KEY_FORMAT = '{db}://{cluster}'
CLUSTER_SCHEMA_RELATION_TYPE = 'SCHEMA'
SCHEMA_CLUSTER_RELATION_TYPE = 'SCHEMA_OF'
SCHEMA_NODE_LABEL = 'Schema'
SCHEMA_KEY_FORMAT = '{db}://{cluster}.{schema}'
SCHEMA_TABLE_RELATION_TYPE = 'TABLE'
TABLE_SCHEMA_RELATION_TYPE = 'TABLE_OF'
TABLE_COL_RELATION_TYPE = 'COLUMN'
COL_TABLE_RELATION_TYPE = 'COLUMN_OF'
TABLE_TAG_RELATION_TYPE = 'TAGGED_BY'
TAG_TABLE_RELATION_TYPE = 'TAG'
# Only for deduping database, cluster, and schema (table and column will be always processed)
serialized_nodes = set() # type: Set[Any]
serialized_rels = set() # type: Set[Any]
def __init__(self,
database, # type: str
cluster, # type: str
schema_name, # type: str
name, # type: str
description, # type: Union[str, None]
columns=None, # type: Iterable[ColumnMetadata]
is_view=False, # type: bool
tags=None, # type: Union[List, str]
**kwargs # type: Dict
):
# type: (...) -> None
"""
:param database:
:param cluster:
:param schema_name:
:param name:
:param description:
:param columns:
:param is_view: Indicate whether the table is a view or not
:param tags:
:param kwargs: Put additional attributes to the table model if there is any.
"""
self.database = database
self.cluster = cluster
self.schema_name = schema_name
self.name = name
self.description = description
self.columns = columns if columns else []
self.is_view = is_view
self.attrs = None
if isinstance(tags, str):
tags = tags.split(',')
if isinstance(tags, list):
tags = [tag.lower().strip() for tag in tags]
self.tags = tags
if kwargs:
self.attrs = copy.deepcopy(kwargs)
self._node_iterator = self._create_next_node()
self._relation_iterator = self._create_next_relation()
def __repr__(self):
# type: () -> str
return 'TableMetadata({!r}, {!r}, {!r}, {!r} ' \
'{!r}, {!r}, {!r}, {!r})'.format(self.database,
self.cluster,
self.schema_name,
self.name,
self.description,
self.columns,
self.is_view,
self.tags)
def _get_table_key(self):
# type: () -> str
return TableMetadata.TABLE_KEY_FORMAT.format(db=self.database,
cluster=self.cluster,
schema=self.schema_name,
tbl=self.name)
def _get_table_description_key(self):
# type: () -> str
return TableMetadata.TABLE_DESCRIPTION_FORMAT.format(db=self.database,
cluster=self.cluster,
schema=self.schema_name,
tbl=self.name)
def _get_database_key(self):
# type: () -> str
return TableMetadata.DATABASE_KEY_FORMAT.format(db=self.database)
def _get_cluster_key(self):
# type: () -> str
return TableMetadata.CLUSTER_KEY_FORMAT.format(db=self.database,
cluster=self.cluster)
def _get_schema_key(self):
# type: () -> str
return TableMetadata.SCHEMA_KEY_FORMAT.format(db=self.database,
cluster=self.cluster,
schema=self.schema_name)
def _get_col_key(self, col):
# type: (ColumnMetadata) -> str
return ColumnMetadata.COLUMN_KEY_FORMAT.format(db=self.database,
cluster=self.cluster,
schema=self.schema_name,
tbl=self.name,
col=col.name)
def _get_col_description_key(self, col):
# type: (ColumnMetadata) -> str
return ColumnMetadata.COLUMN_DESCRIPTION_FORMAT.format(db=self.database,
cluster=self.cluster,
schema=self.schema_name,
tbl=self.name,
col=col.name)
def create_next_node(self):
# type: () -> Union[Dict[str, Any], None]
try:
return next(self._node_iterator)
except StopIteration:
return None
def _create_next_node(self): # noqa: C901
# type: () -> Iterator[Any]
table_node = {NODE_LABEL: TableMetadata.TABLE_NODE_LABEL,
NODE_KEY: self._get_table_key(),
TableMetadata.TABLE_NAME: self.name,
TableMetadata.IS_VIEW: self.is_view}
if self.attrs:
for k, v in self.attrs.items():
if k not in table_node:
table_node[k] = v
yield table_node
if self.description:
yield {NODE_LABEL: DESCRIPTION_NODE_LABEL,
NODE_KEY: self._get_table_description_key(),
TableMetadata.TABLE_DESCRIPTION: self.description}
# Create the table tag node
if self.tags:
for tag in self.tags:
yield {NODE_LABEL: TagMetadata.TAG_NODE_LABEL,
NODE_KEY: TagMetadata.get_tag_key(tag),
TagMetadata.TAG_TYPE: 'default'}
for col in self.columns:
yield {
NODE_LABEL: ColumnMetadata.COLUMN_NODE_LABEL,
NODE_KEY: self._get_col_key(col),
ColumnMetadata.COLUMN_NAME: col.name,
ColumnMetadata.COLUMN_TYPE: col.type,
ColumnMetadata.COLUMN_ORDER: col.sort_order}
if not col.description:
continue
yield {
NODE_LABEL: DESCRIPTION_NODE_LABEL,
NODE_KEY: self._get_col_description_key(col),
ColumnMetadata.COLUMN_DESCRIPTION: col.description}
if not col.tags:
continue
for tag in col.tags:
yield {NODE_LABEL: TagMetadata.TAG_NODE_LABEL,
NODE_KEY: TagMetadata.get_tag_key(tag),
TagMetadata.TAG_TYPE: 'default'}
# Database, cluster, schema
others = [NodeTuple(key=self._get_database_key(),
name=self.database,
label=TableMetadata.DATABASE_NODE_LABEL),
NodeTuple(key=self._get_cluster_key(),
name=self.cluster,
label=TableMetadata.CLUSTER_NODE_LABEL),
NodeTuple(key=self._get_schema_key(),
name=self.schema_name,
label=TableMetadata.SCHEMA_NODE_LABEL)
]
for node_tuple in others:
if node_tuple not in TableMetadata.serialized_nodes:
TableMetadata.serialized_nodes.add(node_tuple)
yield {
NODE_LABEL: node_tuple.label,
NODE_KEY: node_tuple.key,
'name': node_tuple.name
}
def create_next_relation(self):
# type: () -> Union[Dict[str, Any], None]
try:
return next(self._relation_iterator)
except StopIteration:
return None
def _create_next_relation(self):
# type: () -> Iterator[Any]
yield {
RELATION_START_LABEL: TableMetadata.SCHEMA_NODE_LABEL,
RELATION_END_LABEL: TableMetadata.TABLE_NODE_LABEL,
RELATION_START_KEY: self._get_schema_key(),
RELATION_END_KEY: self._get_table_key(),
RELATION_TYPE: TableMetadata.SCHEMA_TABLE_RELATION_TYPE,
RELATION_REVERSE_TYPE: TableMetadata.TABLE_SCHEMA_RELATION_TYPE
}
if self.description:
yield {
RELATION_START_LABEL: TableMetadata.TABLE_NODE_LABEL,
RELATION_END_LABEL: DESCRIPTION_NODE_LABEL,
RELATION_START_KEY: self._get_table_key(),
RELATION_END_KEY: self._get_table_description_key(),
RELATION_TYPE: TableMetadata.TABLE_DESCRIPTION_RELATION_TYPE,
RELATION_REVERSE_TYPE: TableMetadata.DESCRIPTION_TABLE_RELATION_TYPE
}
if self.tags:
for tag in self.tags:
yield {
RELATION_START_LABEL: TableMetadata.TABLE_NODE_LABEL,
RELATION_END_LABEL: TagMetadata.TAG_NODE_LABEL,
RELATION_START_KEY: self._get_table_key(),
RELATION_END_KEY: TagMetadata.get_tag_key(tag),
RELATION_TYPE: TableMetadata.TABLE_TAG_RELATION_TYPE,
RELATION_REVERSE_TYPE: TableMetadata.TAG_TABLE_RELATION_TYPE,
}
for col in self.columns:
yield {
RELATION_START_LABEL: TableMetadata.TABLE_NODE_LABEL,
RELATION_END_LABEL: ColumnMetadata.COLUMN_NODE_LABEL,
RELATION_START_KEY: self._get_table_key(),
RELATION_END_KEY: self._get_col_key(col),
RELATION_TYPE: TableMetadata.TABLE_COL_RELATION_TYPE,
RELATION_REVERSE_TYPE: TableMetadata.COL_TABLE_RELATION_TYPE
}
if not col.description:
continue
yield {
RELATION_START_LABEL: ColumnMetadata.COLUMN_NODE_LABEL,
RELATION_END_LABEL: DESCRIPTION_NODE_LABEL,
RELATION_START_KEY: self._get_col_key(col),
RELATION_END_KEY: self._get_col_description_key(col),
RELATION_TYPE: ColumnMetadata.COL_DESCRIPTION_RELATION_TYPE,
RELATION_REVERSE_TYPE: ColumnMetadata.DESCRIPTION_COL_RELATION_TYPE
}
if not col.tags:
continue
for tag in col.tags:
yield {
RELATION_START_LABEL: TableMetadata.TABLE_NODE_LABEL,
RELATION_END_LABEL: TagMetadata.TAG_NODE_LABEL,
RELATION_START_KEY: self._get_table_key(),
RELATION_END_KEY: TagMetadata.get_tag_key(tag),
RELATION_TYPE: ColumnMetadata.COL_TAG_RELATION_TYPE,
RELATION_REVERSE_TYPE: ColumnMetadata.TAG_COL_RELATION_TYPE,
}
others = [
RelTuple(start_label=TableMetadata.DATABASE_NODE_LABEL,
end_label=TableMetadata.CLUSTER_NODE_LABEL,
start_key=self._get_database_key(),
end_key=self._get_cluster_key(),
type=TableMetadata.DATABASE_CLUSTER_RELATION_TYPE,
reverse_type=TableMetadata.CLUSTER_DATABASE_RELATION_TYPE),
RelTuple(start_label=TableMetadata.CLUSTER_NODE_LABEL,
end_label=TableMetadata.SCHEMA_NODE_LABEL,
start_key=self._get_cluster_key(),
end_key=self._get_schema_key(),
type=TableMetadata.CLUSTER_SCHEMA_RELATION_TYPE,
reverse_type=TableMetadata.SCHEMA_CLUSTER_RELATION_TYPE)
]
for rel_tuple in others:
if rel_tuple not in TableMetadata.serialized_rels:
TableMetadata.serialized_rels.add(rel_tuple)
yield {
RELATION_START_LABEL: rel_tuple.start_label,
RELATION_END_LABEL: rel_tuple.end_label,
RELATION_START_KEY: rel_tuple.start_key,
RELATION_END_KEY: rel_tuple.end_key,
RELATION_TYPE: rel_tuple.type,
RELATION_REVERSE_TYPE: rel_tuple.reverse_type
}