Beginner UMAP

[mommymisato]

Hello, I'm fairly new to the programming world of Bioinformatics. My university is looking at using UMAP to better differentiate between tumor and non tumor tissues. I was just wondering if you could provide me with the type of files that UMAP accepts and maybe if you have a pipeline available that I could follow. Basically, I would be trying to see differences between tumor tissues, non-tumor tissues, when compared with blood. I would be using UMAP after using a cell classifier program called Garnett. Any help would be greatly appreciate a push in the right direction.

Thanks,
B