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run.py
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import numpy as np
import pdb
from collections import Counter
import time
import pandas as pd
class DecisionNode:
def __init__(self, left, right, decision_function, class_label=None):
self.left = left
self.right = right
self.decision_function = decision_function
self.class_label = class_label
def decide(self, feature):
if self.class_label is not None:
return self.class_label
elif self.decision_function(feature):
return self.left.decide(feature)
else:
return self.right.decide(feature)
def load_csv(data_file_path, class_index=-1):
handle = open(data_file_path, 'r')
contents = handle.read()
handle.close()
rows = contents.split('\n')
out = np.array([[float(i) for i in r.split(',')] for r in rows if r])
if(class_index == -1):
classes= out[:,class_index]
features = out[:,:class_index]
return features, classes
elif(class_index == 0):
classes= out[:, class_index]
features = out[:, 1:]
return features, classes
else:
return out
def build_decision_tree():
decision_tree_root = DecisionNode(None, None, lambda x : x[0] == 1)
n2 = DecisionNode(None, None, lambda x: x[1] == 0)
n3 = DecisionNode(None, None, lambda x: x[3] == 1)
n4 = DecisionNode(None, None, lambda x: x[2] == x[3])
one = DecisionNode(None, None, None, 1)
zero = DecisionNode(None, None, None, 0)
decision_tree_root.left = one
decision_tree_root.right = n2
n2.left = n3
n2.right = n4
n3.left = one
n3.right = zero
n4.left = one
n4.right = zero
return decision_tree_root
def confusion_matrix(classifier_output, true_labels):
classifier_output = np.array(classifier_output)
true_labels = np.array(true_labels)
tn = np.sum((classifier_output == 0) * (true_labels == 0))
tp = np.sum((classifier_output == 1) * (true_labels == 1))
fn = np.sum((classifier_output == 0) * (true_labels == 1))
fp = np.sum((classifier_output == 1) * (true_labels == 0))
return [[tp, fn], [fp, tn]]
def precision(classifier_output, true_labels):
classifier_output = np.array(classifier_output)
true_labels = np.array(true_labels)
tp = np.sum((classifier_output == 1) * (true_labels == 1))
fp = np.sum((classifier_output == 1) * (true_labels == 0))
return tp / (tp+fp)
def recall(classifier_output, true_labels):
classifier_output = np.array(classifier_output)
true_labels = np.array(true_labels)
tp = np.sum((classifier_output == 1) * (true_labels == 1))
fn = np.sum((classifier_output == 0) * (true_labels == 1))
return tp / (tp+fn)
def accuracy(classifier_output, true_labels):
classifier_output = np.array(classifier_output)
true_labels = np.array(true_labels)
return np.sum(classifier_output == true_labels) / true_labels.shape[0]
def gini_impurity(class_vector):
class_vector = np.array(class_vector)
p0 = np.sum(class_vector == 0) / class_vector.shape[0]
p1 = np.sum(class_vector == 1) / class_vector.shape[0]
return 1.0 - p0**2 - p1**2
def gini_gain(previous_classes, current_classes):
previous_classes = np.array(previous_classes)
p_entropy = gini_impurity(previous_classes)
rem = 0
for c in current_classes:
c = np.array(c)
if c.size == 0: continue
rem += gini_impurity(c)*(c.shape[0]/previous_classes.shape[0])
return p_entropy - rem
class DecisionTree:
def __init__(self, depth_limit=float("inf")):
self.root = None
self.depth_limit = depth_limit
def fit(self, features, classes):
self.root = self.__build_tree__(features, classes)
def __build_tree__(self, features, classes, depth=0):
def mode(classes):
hmap = {}
mode, max_freq = None, -1
for c in classes:
if c not in hmap: hmap[c] = 0
hmap[c] += 1
for c in hmap:
if hmap[c] > max_freq:
max_freq = hmap[c]
mode = c
return mode
# Check base cases:
if classes.size == 0:
return None
if np.unique(classes).size == 1 or depth == self.depth_limit:
return DecisionNode(None, None, None, mode(classes))
# Find best feature to split data:
alpha_best, alpha_best_g, alpha_best_split = -1, float("-inf"), float("-inf")
for alpha_idx, alpha in enumerate(features.T):
alpha_min_val, alpha_max_val = np.min(alpha), np.max(alpha)
if alpha_min_val == alpha_max_val: continue
best_g, best_split = float("-inf"), None
splits = np.linspace(alpha_min_val+0.001, alpha_max_val, num=100)
for split in splits:
n_idx, p_idx = np.where(alpha <= split), np.where(alpha > split)
# pos_samples, neg_samples = alpha[p_idx], alpha[n_idx]
pos_classes, neg_classes = classes[p_idx], classes[n_idx]
g = gini_gain(classes, [pos_classes, neg_classes])
if g > best_g:
best_g = g
best_split = split
if best_g > alpha_best_g:
alpha_best_g = best_g
alpha_best = alpha_idx
alpha_best_split = best_split
# Split on feature alpha_best, with threshold alpha_best_split
n_idx, p_idx = np.where(features[:, alpha_best] <= alpha_best_split), np.where(features[:, alpha_best] > alpha_best_split)
n_features, n_classes = features[n_idx], classes[n_idx]
p_features, p_classes = features[p_idx], classes[p_idx]
# Build children
n_node = self.__build_tree__(n_features, n_classes, depth+1)
p_node = self.__build_tree__(p_features, p_classes, depth+1)
# Return root
return DecisionNode(n_node, p_node, lambda feature: feature[alpha_best] < alpha_best_split)
def classify(self, features):
class_labels = []
for idx, feature in enumerate(features):
class_labels.append(self.root.decide(feature))
return class_labels
def generate_k_folds(dataset, k):
f, c = dataset
N, D = f.shape
idx = np.random.permutation(N)
f, c = f[idx], c[idx]
folds = []
test_size = N // k
for fold in range(k):
test_idx = np.arange(start=(fold + (k-1))%k * test_size, stop=(fold + (k-1))%k * test_size+test_size)
test_feats, test_class = f[test_idx, :], c[test_idx]
training_feats, training_class = np.delete(f, test_idx, axis=0), np.delete(c, test_idx, axis=0)
folds.append(((training_feats, training_class),(test_feats,test_class)))
return folds
class RandomForest:
def __init__(self, num_trees, depth_limit, example_subsample_rate,
attr_subsample_rate):
self.trees = []
self.num_trees = num_trees
self.depth_limit = depth_limit
self.example_subsample_rate = example_subsample_rate
self.attr_subsample_rate = attr_subsample_rate
self.feat_map = {}
def fit(self, features, classes):
for tree_idx in range(self.num_trees):
tree = DecisionTree(self.depth_limit)
N, D = features.shape
ex_idx = np.random.choice(N, size=int(N * self.example_subsample_rate), replace=False)
f_idx = np.random.choice(D, size=int(D * self.attr_subsample_rate), replace=False)
self.feat_map[tree_idx] = f_idx
feats, labels = features[ex_idx,:][:,f_idx], classes[ex_idx]
tree.fit(feats, labels)
self.trees.append(tree)
def classify(self, features):
def mode(classes):
hmap = {}
mode, max_freq = None, -1
for c in classes:
if c not in hmap: hmap[c] = 0
hmap[c] += 1
for c in hmap:
if hmap[c] > max_freq:
max_freq = hmap[c]
mode = c
return mode
N, D = features.shape
classifications = np.zeros((N, self.num_trees))
ret = np.ones((N,))
for t_idx, tree in enumerate(self.trees):
feat = features[:, self.feat_map[t_idx]]
classifications[:, t_idx] = np.array(tree.classify(feat))
for n in range(N):
ret[n] = mode(classifications[n, :])
return ret
class ChallengeClassifier:
def __init__(self, num_trees=15, depth_limit=15, example_subsample_rate=0.7, attr_subsample_rate=0.7):
self.trees = []
self.num_trees = num_trees
self.depth_limit = depth_limit
self.example_subsample_rate = example_subsample_rate
self.attr_subsample_rate = attr_subsample_rate
self.mean_feat, self.std_feat = None, None
self.feat_map = {}
def fit(self, features, classes):
self.mean_feat = np.mean(features, axis=0)
self.std_feat = np.std(features, axis=0)
features = (features - self.mean_feat) / self.std_feat
for tree_idx in range(self.num_trees):
tree = DecisionTree(self.depth_limit)
N, D = features.shape
ex_idx = np.random.choice(N, size=int(N * self.example_subsample_rate), replace=False)
f_idx = np.random.choice(D, size=int(D * self.attr_subsample_rate), replace=False)
self.feat_map[tree_idx] = f_idx
feats, labels = features[ex_idx,:][:,f_idx], classes[ex_idx]
tree.fit(feats, labels)
self.trees.append(tree)
def classify(self, features):
def mode(classes):
hmap = {}
mode, max_freq = None, -1
for c in classes:
if c not in hmap: hmap[c] = 0
hmap[c] += 1
for c in hmap:
if hmap[c] > max_freq:
max_freq = hmap[c]
mode = c
return mode
features = (features - self.mean_feat) / self.std_feat
N, D = features.shape
classifications = np.zeros((N, self.num_trees))
ret = np.ones((N,))
for t_idx, tree in enumerate(self.trees):
feat = features[:, self.feat_map[t_idx]]
classifications[:, t_idx] = np.array(tree.classify(feat))
for n in range(N):
ret[n] = mode(classifications[n, :])
return list(ret)
class Vectorization:
def __init__(self):
pass
def non_vectorized_loops(self, data):
non_vectorized = np.zeros(data.shape)
for row in range(data.shape[0]):
for col in range(data.shape[1]):
non_vectorized[row][col] = (data[row][col] * data[row][col] +
data[row][col])
return non_vectorized
def vectorized_loops(self, data):
return data*data + data
def non_vectorized_slice(self, data):
max_sum = 0
max_sum_index = 0
for row in range(100):
temp_sum = 0
for col in range(data.shape[1]):
temp_sum += data[row][col]
if temp_sum > max_sum:
max_sum = temp_sum
max_sum_index = row
return max_sum, max_sum_index
def vectorized_slice(self, data):
row_sum = np.sum(data[0:100, :], axis=1)
max_idx = np.argmax(row_sum)
return (row_sum[max_idx], max_idx)
def non_vectorized_flatten(self, data):
unique_dict = {}
flattened = np.hstack(data)
for item in range(len(flattened)):
if flattened[item] > 0:
if flattened[item] in unique_dict:
unique_dict[flattened[item]] += 1
else:
unique_dict[flattened[item]] = 1
return unique_dict.items()
def vectorized_flatten(self, data):
data = data.flatten()
data = data[data > 0]
un, ct = np.unique(data, return_counts=True)
return list(zip(un,ct))
def get_ord(x):
summed = 0
for c in x:
summed += ord(c)
return summed
def read_csv(filepath, class_index=-1):
df = pd.read_csv(filepath)
df['job'] = df['job'].apply(lambda x: get_ord(x))
df['education'] = df['education'].apply(lambda x: get_ord(x))
df['marital'] = df['marital'].apply(lambda x: get_ord(x))
df['default'] = df['default'].apply(lambda x: get_ord(x))
df['housing'] = df['housing'].apply(lambda x: get_ord(x))
df['loan'] = df['loan'].apply(lambda x: get_ord(x))
df['contact'] = df['contact'].apply(lambda x: get_ord(x))
df['month'] = df['month'].apply(lambda x: get_ord(x))
df['day_of_week'] = df['day_of_week'].apply(lambda x: get_ord(x))
df['poutcome'] = df['poutcome'].apply(lambda x: get_ord(x))
df = np.array(df)
if(class_index == -1):
classes= df[:,class_index]
features = df[:,:class_index]
return features, classes
elif(class_index == 0):
classes= df[:, class_index]
features = df[:, 1:]
return features, classes
if __name__ == "__main__":
cc = ChallengeClassifier(15,15,0.83,0.83)
features, classes = read_csv('train.csv')
cc.fit(features, classes)
features, classes = read_csv('test.csv')
classified = cc.classify(features)
print(classified)