pom.xml

<?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
    <modelVersion>4.0.0</modelVersion>
    <groupId>org.lifs-tools</groupId>
    <artifactId>mztab-validator-webapp</artifactId>
    <version>1.0.30-SNAPSHOT</version>
    <packaging>jar</packaging>
    <description>A web-based validator for mzTab format version 1.0 onwards.</description>
    <name>MzTab validator webapplication.</name>	
    <url>https://github.com/lifs-tools/jmzTab-m-webapp</url>	
    <licenses>
        <license>
            <name>The Apache License, Version 2.0</name>
            <url>http://www.apache.org/licenses/LICENSE-2.0.txt</url>
            <distribution>repo</distribution>
        </license>
    </licenses>
    <developers>
        <developer>
            <name>Nils Hoffmann</name>
            <email>nils.hoffmann@cebitec.uni-bielefelde.de</email>
            <organization>Center For Biotechnology</organization>
            <organizationUrl>https://cebitec.uni-bielefeld.de</organizationUrl>
            <roles>
                <role>developer</role>
            </roles>
            <timezone>Europe/Berlin</timezone>
        </developer>
    </developers>
    <scm>
        <connection>scm:git:git://github.com/lifs-tools/jmztab-m-webapp.git</connection>
        <developerConnection>scm:git:ssh://github.com:lifs-tools/jmztab-m-webapp.git</developerConnection>
        <url>http://github.com/lifs-tools/jmztab-m-webapp/tree/master</url>
    </scm>
    <issueManagement>
        <system>GitHub</system>
        <url>https://github.com/lifs-tools/luxscore/issues</url>
    </issueManagement>
    <organization>
        <name>Lipidomics Informatics for Life Sciences</name>
        <url>https://lifs-tools.org</url>
    </organization>
    
    <inceptionYear>2017</inceptionYear>
    
    <distributionManagement>
        <repository>
            <id>lifstools-jfrog</id>
            <name>lifstools-release</name>
            <url>https://m.lifs-tools.org/artifactory/libs-release-local</url>
        </repository>
        <snapshotRepository>
            <id>lifstools-jfrog</id>
            <name>lifstools-snapshot</name>
            <url>https://m.lifs-tools.org/artifactory/libs-snapshot-local</url>
        </snapshotRepository>
    </distributionManagement>
    
    <properties>
        <project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
        <!--        <maven.compiler.source>1.8</maven.compiler.source>
        <maven.compiler.target>1.8</maven.compiler.target>-->
        <!-- maven compile plugin settings -->
        <maven.compiler.release>17</maven.compiler.release>
        <project.reporting.outputEncoding>UTF-8</project.reporting.outputEncoding>
        <!-- spring boot specific -->
        <java.version>17</java.version>
        <jmztab.version>3.0.9</jmztab.version>
        <jmztabm.version>1.0.7-SNAPSHOT</jmztabm.version>
        <application.version.number>${project.version}</application.version.number>
        <springfox.version>3.0.0</springfox.version>
        <guava.version>30.1.1-jre</guava.version>
        <spring.boot.version>2.5.14</spring.boot.version>
        <docker.image.prefix>docker.lifs-tools.org/lifs</docker.image.prefix>
        <dockerfile.plugin.version>1.4.13</dockerfile.plugin.version>
        <docker.base.image>azul/zulu-openjdk-alpine</docker.base.image>
        <docker.base.image.version>17-jre-headless-latest</docker.base.image.version>
        <lombok.version>1.18.24</lombok.version>
        <junit.version>4.13.2</junit.version>
        <hamcrest.version>1.3</hamcrest.version>
        <javax.validation.version>2.0.0.Final</javax.validation.version>
        <junit.jupiter.version>5.0.3</junit.jupiter.version>
        <junit.vintage.version>4.12.3</junit.vintage.version>
        <junit.platform.version>1.0.3</junit.platform.version>
        <swagger.version>1.6.9</swagger.version>
        <jersey.version>2.22.2</jersey.version>
        <jackson.version>2.14.1</jackson.version>
        <jackson.databind.version>2.14.1</jackson.databind.version>
        <jodatime.version>2.12.1</jodatime.version>
        <hibernate.validator.version>6.0.20.Final</hibernate.validator.version>
        <slf4j.version>1.7.25</slf4j.version>
        <javax.el.version>3.0.1-b09</javax.el.version>
        <migbase.version>2.2</migbase.version>
        <jaxb.api-version>2.3.1</jaxb.api-version>
        <jaxb.core-version>2.3.0.1</jaxb.core-version>
        <jaxb.version>2.3.5</jaxb.version>
        <javax.annotation-api.version>1.3.2</javax.annotation-api.version>
        <javax.activation-api.version>1.2.0</javax.activation-api.version>
        <swagger2markup.version>1.3.4</swagger2markup.version>
        <maven-plugin-version>1.0.0</maven-plugin-version>
        <jacoco.version>0.8.8</jacoco.version>
        <bootstrap.version>4.6.2</bootstrap.version>
        <jquery.version>3.6.1</jquery.version>
        <assembly.dir>${project.artifactId}</assembly.dir>
        <app.name>mztabvalidator</app.name>
        <contextPath>/${app.name}</contextPath>
        <ga.id></ga.id>
        <start-class>org.lifstools.mztab.validator.webapp.Application</start-class>
    </properties>

    <dependencyManagement>
        <dependencies>
            <dependency>
                <groupId>org.projectlombok</groupId>
                <artifactId>lombok</artifactId>
                <version>${lombok.version}</version>
                <scope>provided</scope>
            </dependency>
            <dependency>
                <groupId>junit</groupId>
                <artifactId>junit</artifactId>
                <version>${junit.version}</version>
                <scope>test</scope>
            </dependency>
            <dependency>
                <groupId>io.swagger</groupId>
                <artifactId>swagger-annotations</artifactId>
                <version>${swagger.version}</version>
            </dependency>

            <!-- HTTP client: jersey-client -->
            <dependency>
                <groupId>org.glassfish.jersey.core</groupId>
                <artifactId>jersey-client</artifactId>
                <version>${jersey.version}</version>
            </dependency>
            <dependency>
                <groupId>org.glassfish.jersey.media</groupId>
                <artifactId>jersey-media-multipart</artifactId>
                <version>${jersey.version}</version>
            </dependency>
            <dependency>
                <groupId>org.glassfish.jersey.media</groupId>
                <artifactId>jersey-media-json-jackson</artifactId>
                <version>${jersey.version}</version>
            </dependency>

            <!-- JSON processing: jackson -->
            <dependency>
                <groupId>com.fasterxml.jackson.core</groupId>
                <artifactId>jackson-core</artifactId>
                <version>${jackson.version}</version>
            </dependency>
            <dependency>
                <groupId>com.fasterxml.jackson.core</groupId>
                <artifactId>jackson-annotations</artifactId>
                <version>${jackson.version}</version>
            </dependency>
            <dependency>
                <groupId>com.fasterxml.jackson.core</groupId>
                <artifactId>jackson-databind</artifactId>
                <version>${jackson.databind.version}</version>
            </dependency>
            <dependency>
                <groupId>com.fasterxml.jackson.datatype</groupId>
                <artifactId>jackson-datatype-joda</artifactId>
                <version>${jackson.version}</version>
            </dependency>
            <dependency>
                <groupId>com.fasterxml.jackson.dataformat</groupId>
                <artifactId>jackson-dataformat-csv</artifactId>
                <version>${jackson.version}</version>
            </dependency>
            <dependency>
                <groupId>joda-time</groupId>
                <artifactId>joda-time</artifactId>
                <version>${jodatime.version}</version>
            </dependency>

            <!-- Base64 encoding that works in both JVM and Android -->
            <dependency>
                <groupId>com.brsanthu</groupId>
                <artifactId>migbase64</artifactId>
                <version>${migbase.version}</version>
            </dependency>
            <dependency>
                <groupId>io.github.swagger2markup</groupId>
                <artifactId>swagger2markup</artifactId>
                <version>${swagger2markup.version}</version>
            </dependency>
            <dependency>
                <!-- Import dependency management from Spring Boot -->
                <groupId>org.springframework.boot</groupId>
                <artifactId>spring-boot-dependencies</artifactId>
                <version>${spring.boot.version}</version>
                <type>pom</type>
                <scope>import</scope>
            </dependency>
            <dependency>
                <groupId>de.isas.mztab</groupId>
                <artifactId>jmztabm-io</artifactId>
                <version>${jmztabm.version}</version>
            </dependency>
            <dependency>
                <groupId>de.isas.mztab</groupId>
                <artifactId>jmztabm-validation</artifactId>
                <version>${jmztabm.version}</version>
            </dependency>
            <!-- packages missing from JDK 11 -->
            <dependency>
                <groupId>javax.xml.bind</groupId>
                <artifactId>jaxb-api</artifactId>
                <version>${jaxb.api-version}</version>
            </dependency>
            <dependency>
                <groupId>com.sun.xml.bind</groupId>
                <artifactId>jaxb-core</artifactId>
                <version>${jaxb.core-version}</version>
            </dependency>
            <dependency>
                <groupId>com.sun.xml.bind</groupId>
                <artifactId>jaxb-impl</artifactId>
                <version>${jaxb.version}</version>
            </dependency>
            <dependency>
                <groupId>javax.annotation</groupId>
                <artifactId>javax.annotation-api</artifactId>
                <version>${javax.annotation-api.version}</version>
            </dependency>
            <dependency>
                <groupId>com.sun.activation</groupId>
                <artifactId>javax.activation</artifactId>
                <version>${javax.activation-api.version}</version>
            </dependency>
        </dependencies>
    </dependencyManagement>

    <dependencies>
        <dependency>
            <groupId>org.springframework.boot</groupId>
            <artifactId>spring-boot-starter-thymeleaf</artifactId>
            <!--<version>${spring.boot.version}</version>-->
        </dependency>
        <!--SpringFox dependencies -->
        <!--        <dependency>
            <groupId>io.springfox</groupId>
            <artifactId>springfox-boot-starter</artifactId>
            <version>${springfox.version}</version>
        </dependency>-->
        <!--        <dependency>
            <groupId>io.springfox</groupId>
            <artifactId>springfox-swagger-ui</artifactId>
            <version>${springfox.version}</version>
        </dependency>-->
        <dependency>
            <groupId>org.springdoc</groupId>
            <artifactId>springdoc-openapi-ui</artifactId>
            <version>1.6.14</version>
        </dependency>

        <!--    <dependency>
          <groupId>com.github.joschi.jackson</groupId>
          <artifactId>jackson-datatype-threetenbp</artifactId>
          <version>2.8.4</version>
        </dependency>-->
        <dependency>
            <groupId>org.springframework.boot</groupId>
            <artifactId>spring-boot-devtools</artifactId>
            <optional>true</optional>
            <!--<version>${spring.boot.version}</version>-->
        </dependency>
        <dependency>
            <groupId>org.springframework.boot</groupId>
            <artifactId>spring-boot-starter-logging</artifactId>
            <!--<version>${spring.boot.version}</version>-->
        </dependency>
    
        <dependency>
            <groupId>org.springframework.boot</groupId>
            <artifactId>spring-boot-starter-actuator</artifactId>
            <!--<version>${spring.boot.version}</version>-->
        </dependency>

        <dependency>
            <groupId>org.springframework.boot</groupId>
            <artifactId>spring-boot-starter-test</artifactId>
            <scope>test</scope>
            <!--<version>${spring.boot.version}</version>-->
        </dependency>
        
        <dependency>
            <groupId>uk.ac.ebi.pride</groupId>
            <artifactId>jmztab-modular-model</artifactId>
            <version>${jmztab.version}</version>
            <!-- based on mzTab specification version 1.0 -->
        </dependency>
        <dependency>
            <groupId>uk.ac.ebi.pride</groupId>
            <artifactId>jmztab-modular-util</artifactId>
            <version>${jmztab.version}</version>
            <!-- based on mzTab specification version 1.0 -->
        </dependency>
        <dependency>
            <groupId>org.lifs-tools</groupId>
            <artifactId>jmztabm-io</artifactId>
            <type>jar</type>
            <version>${jmztabm.version}</version>
        </dependency>
        <dependency>
            <groupId>com.fasterxml.jackson.dataformat</groupId>
            <artifactId>jackson-dataformat-xml</artifactId>
        </dependency>
        <dependency>
            <groupId>com.fasterxml.jackson.jaxrs</groupId>
            <artifactId>jackson-jaxrs-base</artifactId>
        </dependency>
        <dependency>
            <groupId>com.fasterxml.jackson.jaxrs</groupId>
            <artifactId>jackson-jaxrs-json-provider</artifactId>
        </dependency>
        <dependency>
            <groupId>com.fasterxml.jackson.module</groupId>
            <artifactId>jackson-module-jaxb-annotations</artifactId>
        </dependency>
        <dependency>
            <groupId>ognl</groupId>
            <artifactId>ognl</artifactId>
            <version>3.3.4</version>
        </dependency>
        <dependency>
            <groupId>javax.ws.rs</groupId>
            <artifactId>javax.ws.rs-api</artifactId>
            <version>2.1.1</version>
        </dependency>
        <dependency>
            <groupId>${project.groupId}</groupId>
            <artifactId>jmztabm-validation</artifactId>
            <version>${jmztabm.version}</version>
        </dependency>
        <dependency>
            <groupId>org.projectlombok</groupId>
            <artifactId>lombok</artifactId>
            <scope>provided</scope>
            <version>${lombok.version}</version>
        </dependency>
        <dependency>
            <groupId>org.springframework.boot</groupId>
            <artifactId>spring-boot-starter-web</artifactId>
        </dependency>
        <dependency>
            <groupId>javax.xml.bind</groupId>
            <artifactId>jaxb-api</artifactId>
        </dependency>
        <dependency>
            <groupId>com.sun.xml.bind</groupId>
            <artifactId>jaxb-core</artifactId>
        </dependency>
        <dependency>
            <groupId>com.sun.xml.bind</groupId>
            <artifactId>jaxb-impl</artifactId>
        </dependency>
        <dependency>
            <groupId>com.sun.activation</groupId>
            <artifactId>javax.activation</artifactId>
        </dependency>
        <dependency>
            <groupId>com.google.guava</groupId>
            <artifactId>guava</artifactId>
            <version>${guava.version}</version>
        </dependency>
        <dependency>
            <groupId>io.swagger</groupId>
            <artifactId>swagger-annotations</artifactId>
        </dependency>
        <dependency>
            <groupId>io.swagger</groupId>
            <artifactId>swagger-models</artifactId>
            <version>1.6.9</version>
        </dependency>
        <dependency>
            <groupId>org.apache.tomcat.embed</groupId>
            <artifactId>tomcat-embed-core</artifactId>
        </dependency>
        <dependency>
            <groupId>org.apache.tomcat.embed</groupId>
            <artifactId>tomcat-embed-el</artifactId>
        </dependency>
        <dependency>
            <groupId>org.apache.tomcat.embed</groupId>
            <artifactId>tomcat-embed-websocket</artifactId>
        </dependency>
        <dependency>
            <groupId>org.apache.tomcat</groupId>
            <artifactId>tomcat-annotations-api</artifactId>
        </dependency>
        <!--        <dependency>
            <groupId>org.apache.logging.log4j</groupId>
            <artifactId>log4j-api</artifactId>
        </dependency>
        <dependency>
            <groupId>org.apache.logging.log4j</groupId>
            <artifactId>log4j-to-slf4j</artifactId>
        </dependency>-->
        <dependency>
            <groupId>org.webjars</groupId>
            <artifactId>webjars-locator-core</artifactId>
        </dependency>
        <dependency>
            <groupId>org.webjars</groupId>
            <artifactId>jquery</artifactId>
            <version>${jquery.version}</version>
        </dependency>
        <dependency>
            <groupId>org.webjars</groupId>
            <artifactId>bootstrap</artifactId>
            <version>${bootstrap.version}</version>
        </dependency>
        <dependency>
            <groupId>com.github.joschi.jackson</groupId>
            <artifactId>jackson-datatype-threetenbp</artifactId>
            <version>2.12.5</version>
            <type>jar</type>
        </dependency>
    </dependencies>

    <build>
        <resources>
            <resource>
                <directory>src/main/resources</directory>
                <filtering>true</filtering>
            </resource>
        </resources>
        <pluginManagement>
            <plugins>
                <plugin>
                    <groupId>org.owasp</groupId>
                    <artifactId>dependency-check-maven</artifactId>
                    <version>7.3.2</version>
                    <configuration>
                        <cveValidForHours>12</cveValidForHours>
                        <failBuildOnCVSS>5</failBuildOnCVSS>
                        <skipProvidedScope>true</skipProvidedScope>
                        <skipRuntimeScope>true</skipRuntimeScope>
                    </configuration>
                    <executions>
                        <execution>
                            <goals>
                                <goal>check</goal>
                            </goals>
                        </execution>
                    </executions>
                </plugin>
                <plugin>
                    <groupId>org.codehaus.mojo</groupId>
                    <artifactId>buildnumber-maven-plugin</artifactId>
                    <version>3.0.0</version>
                    <executions>
                        <execution>
                            <phase>validate</phase>
                            <goals>
                                <goal>create</goal>
                            </goals>
                        </execution>
                    </executions>
                    <configuration>
                        <doCheck>false</doCheck>
                        <doUpdate>false</doUpdate>
                    </configuration>
                </plugin>
                <plugin>
                    <groupId>org.apache.maven.plugins</groupId>
                    <artifactId>maven-install-plugin</artifactId>
                    <version>3.1.0</version>
                </plugin>
                <plugin>
                    <groupId>org.apache.maven.plugins</groupId>
                    <artifactId>maven-deploy-plugin</artifactId>
                    <version>3.0.0-M2</version>
                </plugin>
                <plugin>
                    <groupId>org.apache.maven.plugins</groupId>
                    <artifactId>maven-dependency-plugin</artifactId>
                    <version>3.3.0</version>
                </plugin>
                <plugin>
                    <groupId>org.apache.maven.plugins</groupId>
                    <artifactId>maven-jar-plugin</artifactId>
                    <version>3.3.0</version>
                    <configuration>
                        <archive>
                            <manifest>
                                <addDefaultImplementationEntries>true</addDefaultImplementationEntries>
                            </manifest>
                            <manifestEntries>
                                <Implementation-Build>${buildNumber}</Implementation-Build>
                                <Commit>${buildNumber}</Commit>
                                <Branch>${scmBranch}</Branch>
                                <Build-Time>${maven.build.timestamp}</Build-Time>
                            </manifestEntries>
                        </archive>
                    </configuration>
                </plugin>
                <plugin>
                    <groupId>org.apache.maven.plugins</groupId>
                    <artifactId>maven-assembly-plugin</artifactId>
                    <version>3.4.2</version>
                </plugin>
                <plugin>
                    <groupId>org.apache.maven.plugins</groupId>
                    <artifactId>maven-javadoc-plugin</artifactId>
                    <version>3.4.1</version>
                    <executions>
                        <execution>
                            <id>attach-javadocs</id>
                            <goals>
                                <goal>jar</goal>
                            </goals>
                            <configuration>
                                <additionalparam>-Xdoclint:none</additionalparam>
                            </configuration>
                        </execution>
                        <execution>
                            <goals>
                                <goal>javadoc</goal>
                            </goals>
                            <phase>site</phase>
                        </execution>
                    </executions>
                </plugin>
                <plugin>
                    <artifactId>maven-compiler-plugin</artifactId>
                    <version>3.10.1</version>
                    <configuration>
                        <release>${java.version}</release>
                        <!--                        <source>${java.version}</source>
                        <target>${java.version}</target>-->
                    </configuration>
                </plugin>
                <plugin>
                    <artifactId>maven-surefire-plugin</artifactId>
                    <version>3.0.0-M7</version>
                    <configuration>
                        <redirectTestOutputToFile>true</redirectTestOutputToFile>
                        <parallel>classes</parallel>
                        <threadCount>2</threadCount>
                        <trimStackTrace>false</trimStackTrace>
                        <workingDirectory>${project.build.directory}/surefire-files</workingDirectory>
                    </configuration>
                </plugin>
                <plugin>
                    <groupId>org.apache.maven.plugins</groupId>
                    <artifactId>maven-shade-plugin</artifactId>
                    <version>3.4.1</version>
                </plugin>
                <plugin>
                    <groupId>org.apache.maven.plugins</groupId>
                    <artifactId>maven-source-plugin</artifactId>
                    <version>3.2.1</version>
                    <executions>
                        <execution>
                            <id>attach-sources</id>
                            <goals>
                                <goal>jar-no-fork</goal>
                            </goals>
                        </execution>
                    </executions>
                </plugin>
                <plugin>
                    <groupId>org.jacoco</groupId>
                    <artifactId>jacoco-maven-plugin</artifactId>
                    <version>${jacoco.version}</version>
                    <executions>
                        <execution>
                            <goals>
                                <goal>prepare-agent</goal>
                            </goals>
                        </execution>
                        <execution>
                            <id>report</id>
                            <phase>prepare-package</phase>
                            <goals>
                                <goal>report</goal>
                            </goals>
                        </execution>
                        <execution>
                            <id>post-unit-test</id>
                            <phase>test</phase>
                            <goals>
                                <goal>report</goal>
                            </goals>
                            <configuration>
                                <!-- Sets the path to the file which contains the execution data. -->

                                <dataFile>target/jacoco.exec</dataFile>
                                <!-- Sets the output directory for the code coverage report. -->
                                <outputDirectory>target/jacoco-ut</outputDirectory>
                            </configuration>
                        </execution>
                    </executions>
                    <configuration>
                        <systemPropertyVariables>
                            <jacoco-agent.destfile>target/jacoco.exec</jacoco-agent.destfile>
                        </systemPropertyVariables>
                    </configuration>
                </plugin>
                <plugin>
                    <groupId>org.apache.maven.plugins</groupId>
                    <artifactId>maven-enforcer-plugin</artifactId>
                    <version>3.1.0</version>
                    <executions>
                        <execution>
                            <id>enforce-maven</id>
                            <goals>
                                <goal>enforce</goal>
                            </goals>
                            <configuration>
                                <rules>
                                    <requireMavenVersion>
                                        <version>3.5</version>
                                    </requireMavenVersion>
                                </rules>
                            </configuration>
                        </execution>
                    </executions>
                </plugin>
                <plugin>
                    <groupId>org.apache.maven.plugins</groupId>
                    <artifactId>maven-resources-plugin</artifactId>
                    <version>3.3.0</version>
                    <configuration>
                        <delimiters>
                            <delimiter>@</delimiter>
                        </delimiters>
                        <useDefaultDelimiters>false</useDefaultDelimiters>
                    </configuration>
                </plugin>
                <plugin>
                    <groupId>com.google.cloud.tools</groupId>
                    <artifactId>jib-maven-plugin</artifactId>
                    <version>3.4.0</version>
                    <executions>
                        <execution>
                            <phase>package</phase>
                            <goals>
                                <goal>build</goal>
                            </goals>
                        </execution>
                    </executions>
                    <configuration>
                        <from>
                            <image>${docker.base.image}:${docker.base.image.version}</image>
                        </from>
                        <to>
                            <image>${docker.image.prefix}/${project.artifactId}</image>
                            <tags>
                                <tag>${project.version}</tag> 
                            </tags>
                        </to>
                        <container>
                            <jvmFlags>
                                <jvmFlag>-Djava.security.egd=file:/dev/./urandom</jvmFlag>
                            </jvmFlags>
                            <ports>
                                <port>8083</port>
                            </ports>
                            <volumes>
                                <volume>/tmp</volume>
                            </volumes>
                            <!--<user>1000:1000</user>-->
                            <creationTime>USE_CURRENT_TIMESTAMP</creationTime>
                        </container>
                        <allowInsecureRegistries>false</allowInsecureRegistries>
                        <skip>true</skip>
                    </configuration>
                </plugin>
            </plugins>
        </pluginManagement>
        <plugins>
            <plugin>
                <groupId>org.codehaus.mojo</groupId>
                <artifactId>buildnumber-maven-plugin</artifactId>
            </plugin>
            <plugin>
                <artifactId>maven-install-plugin</artifactId>
            </plugin>
            <plugin>
                <artifactId>maven-deploy-plugin</artifactId>
            </plugin>
            <plugin>
                <artifactId>maven-dependency-plugin</artifactId>
            </plugin>
            <plugin>
                <artifactId>maven-jar-plugin</artifactId>
            </plugin>
            <plugin>
                <artifactId>maven-assembly-plugin</artifactId>
            </plugin>
            <plugin>
                <artifactId>maven-compiler-plugin</artifactId>
                <configuration>
                    <source>${java.version}</source>
                    <target>${java.version}</target>
                </configuration>
            </plugin>
            <plugin>
                <artifactId>maven-surefire-plugin</artifactId>
            </plugin>
            <plugin>
                <artifactId>maven-shade-plugin</artifactId>
            </plugin>
            <plugin>
                <groupId>org.springframework.boot</groupId>
                <artifactId>spring-boot-maven-plugin</artifactId>
                <configuration>
                    <executable>true</executable>
                    <mainClass>${start-class}</mainClass>
                    <layout>ZIP</layout>
                </configuration>
                <version>${spring.boot.version}</version>
                <executions>
                    <execution>
                        <goals>
                            <goal>repackage</goal>
                        </goals>
                    </execution>
                </executions>
            </plugin>
            <plugin>
                <groupId>org.apache.maven.plugins</groupId>
                <artifactId>maven-resources-plugin</artifactId>
            </plugin>
            <plugin>
                <groupId>org.apache.maven.plugins</groupId>
                <artifactId>maven-enforcer-plugin</artifactId>
            </plugin>
        </plugins>
    </build>
    <profiles>
        <profile>
            <id>dev</id>
            <properties>
                <spring.profiles.active>dev</spring.profiles.active>
            </properties>
        </profile>
   
        <profile>
            <id>release</id>
            <build>
                <plugins>
                    <plugin>
                        <groupId>org.owasp</groupId>
                        <artifactId>dependency-check-maven</artifactId>
                        <configuration>
                            <cveValidForHours>12</cveValidForHours>
                            <failBuildOnCVSS>5</failBuildOnCVSS>
                            <skipProvidedScope>true</skipProvidedScope>
                            <skipRuntimeScope>true</skipRuntimeScope>
                            <suppressionFile>suppressions.xml</suppressionFile>
                        </configuration>
                        <executions>
                            <execution>
                                <goals>
                                    <goal>check</goal>
                                </goals>
                            </execution>
                        </executions>
                    </plugin>
                    <plugin>
                        <groupId>org.apache.maven.plugins</groupId>
                        <artifactId>maven-source-plugin</artifactId>
                        <version>3.2.1</version>
                        <executions>
                            <execution>
                                <id>attach-sources</id>
                                <goals>
                                    <goal>jar-no-fork</goal>
                                </goals>
                            </execution>
                        </executions>
                    </plugin>
                    <plugin>
                        <groupId>org.apache.maven.plugins</groupId>
                        <artifactId>maven-jar-plugin</artifactId>
                    </plugin>
                </plugins>
            </build>
        </profile>
        <profile>
            <id>docker</id>
            <build>
                <plugins>
                    <plugin>
                        <groupId>com.google.cloud.tools</groupId>
                        <artifactId>jib-maven-plugin</artifactId>
                        <configuration>
                            <skip>false</skip>
                        </configuration>
                    </plugin>
                    <!--                    <plugin>
                        <groupId>com.spotify</groupId>
                        <artifactId>dockerfile-maven-plugin</artifactId>
                        <version>${dockerfile.plugin.version}</version>
                        <executions>
                            <execution>
                                <id>default</id>
                                <phase>package</phase>
                                <goals>
                                    <goal>build</goal>
                                    <goal>tag</goal>
                                </goals>
                                <configuration>
                                    <tag>${project.version}</tag>
                                </configuration>
                            </execution>
                        </executions>
                        <configuration>
                            <repository>${docker.image.prefix}/${project.artifactId}</repository>
                            <buildArgs>
                                <JAR_FILE>${project.build.finalName}.jar</JAR_FILE>
                                <APP_NAME>${app.name}</APP_NAME>
                            </buildArgs>
                        </configuration>
                    </plugin>-->
                </plugins>
            </build>
        </profile>
    </profiles>
    <repositories>
        <repository>
            <snapshots>
                <enabled>false</enabled>
            </snapshots>
            <id>artifactory-releases</id>
            <name>lifs-release</name>
            <url>https://m.lifs-tools.org/artifactory/libs-release</url>
        </repository>
        <repository>
            <snapshots>
                <enabled>true</enabled>
            </snapshots>
            <id>artifactory-snapshots</id>
            <name>libs-snapshot</name>
            <url>https://m.lifs-tools.org/artifactory/libs-snapshot</url>
        </repository>
        <repository>
            <snapshots>
                <enabled>false</enabled>
            </snapshots>
            <id>ebi-releases</id>
            <name>ebi</name>
            <url>https://www.ebi.ac.uk/Tools/maven/repos/content/groups/ebi-repo</url>
        </repository>
    </repositories>
</project>