# This file is used to specify modifications for MSGF+

# Max Number of Modifications per peptide
# If this value is large, the search will be slow
NumMods=5

# Static mods
229.162932,*,fix,N-term,TMT10plex
229.162932,K,fix,any,TMT10plex
C2H3N1O1,C,fix,any,Carbamidomethyl

# Dynamic mods
O1,M,opt,any,Oxidation     # Oxidized methionine