- Handle empty channels
- Single pipeline for both pooled/single file LC
- Better QC
- TMT18 support with new OpenMS
- Add instrument types
- Pooled labelchecks
- Plot and usage improvements
- Updated MSGF+ to 20
- Updated percolator to 3.4
- Updated OpenMS to 2.5, enabling analysis of TMT16plex runs
- Added missed cleavage plot
- Removed some scripts, simplifying pipeline, cleanup
- Better axis labels, title
First release of lehtiolab/nf-labelcheck, created with the nf-core template.