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Hi,
My input file is a ONT fastq file (where I simply cat *.fastq > bacteria01.fastq the reads I got from the sequencing center).
However, it is not recognized by Raven.
Command: raven -t 50 bacteria01.fastq
There are no 0-length reads in the file.fq.
I'll be happy for any help (converting the fastq to fastq didn't work as well).
The text was updated successfully, but these errors were encountered:
Hello,
the error you got was [bioparser::FastaParser] error: invalid file format? This usually means that your file extension does not match the file format. Although, the command you posted has .fastq. Can you check if that is correct?
Hi,
My input file is a ONT fastq file (where I simply
cat *.fastq > bacteria01.fastq
the reads I got from the sequencing center).However, it is not recognized by Raven.
Command:
raven -t 50 bacteria01.fastq
There are no 0-length reads in the file.fq.
I'll be happy for any help (converting the fastq to fastq didn't work as well).
The text was updated successfully, but these errors were encountered: