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"Replacing stale connection" -- Kernal cannot connect #4457

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seanngpack opened this issue Mar 6, 2019 · 20 comments
Closed

"Replacing stale connection" -- Kernal cannot connect #4457

seanngpack opened this issue Mar 6, 2019 · 20 comments

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@seanngpack
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Hi, does anyone have an input on my issue? I am running Jupyter from Anaconda and updated everything to the latest. When I enter the notebook on port 8888 it never connects to the kernel and I cannot run the cells.

I followed every single guide I could read and tried changing ports, deleting adblocks, and downgrading tornado to 5.1.1 but still no luck.

Thanks!

@jasongrout
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Can you try upgrading to notebook 5.7.5, just to make sure it's not the tornado incompatibility?

See #4439 and #4449.

@seanngpack
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Thanks! Figured out my issue was that I didn't have notebook installed.

@seanngpack seanngpack reopened this Mar 8, 2019
@seanngpack
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seanngpack commented Mar 8, 2019

Oops, false alarm wasn't notebook, still doesn't work
Upgraded notebook to 5.7.5, still issue.
Combinations I've tried:

  • Notebook 5.7.5, tornado 6.0.1
  • Notebook 5.7.5, tornado 5.1.1
  • Notebook 5.7.4 tornados 6.0.1
  • Notebook 5.7.4 tornados 5.1.1

@syagev
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syagev commented Mar 20, 2019

I got the same issue after downgrading jupyter notebook from 5.7.6 to 5.7.4 due to #4467.
Indeed downgrading tornado down to 4.2.0 solved the issue.

@andrewm4894
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downgrading to tornado 5.1.1 worked for me.

@VSehwag
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VSehwag commented Aug 28, 2019

Simply downgrading tornado to 4.2.0 worked for me.

@tranhungnghiep
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Upgrading tornado to the current version 6.0.4 fixed the issue for me.

@seshu2169
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upgraded notebook to 6.0.3 ,issue resolved

@HeloiseS
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downgrading to tornado 5.1.1 worked for me.

This also worked for me - I had the latest tornado version 6.0.4 and the downgrade fixed the pblm

@pdmptsjtsj
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I had the same problem when opening bash notebooks (not with python notebooks). Downgrading to different versions of tornado didn't help. Could this problem be related to port access?

@duongkstn
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Thanks everyone, I downgraded tornado==5.1.1 to replaced 6.0.3 version, then jupyter (jupyter-notebook==5.6.0, jupyter core==4.6.1) works properly.

@paultimothymooney
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Likewise, I was unable to start a new Jupyterlab session because of the "replacing stale connection" error message, but then I fixed the problem by running "pip install tornado==5.1.1" to downgrade from the latest available version. This thread was helpful for solving that error, thank you.

@Isayiyas
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Thank you guys. It worked for me too: tornado==5.1.1 + jupyter notebook 5.6.0 !

@noklam
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noklam commented Mar 25, 2021

Thank you guys. It worked for me too: tornado==5.1.1 + jupyter notebook 5.6.0 !

Whoa, works for me, thanks!

@swill
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swill commented Jun 14, 2021

I am getting this same issue. Can someone here provide me a little context around what steps you took to change the versions. I am currently using the jupyter/all-spark-notebook, so I am suspecting that you updated the Dockerfile and changed/specified the versions of the packages installed.

I have found the notebook version defined in the base-notebook.
image

However, I can't see tornado installed in any of the ancestors of the jupyter/all-spark-notebook:

base-notebook  > minimal-notebook > scipy-notebook > pyspark-notebook > all-spark-notebook

Any insights are welcome. Thanks...

@kevin-bates
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Hmm. Given this issue was created over two years ago and doesn't contain any diagnostic output, it might be worth taking a closer look at the error you're experiencing before following downgrade suggestions.

FWIW, I just pulled jupyter/all-spark-notebook:latest and can create all 3 of its supplied kernels:
image

Are you seeing any traceback information posted on the terminal from which the image was launched? Could you please provide what you do see? (Please scrape the screen rather than capturing an image so others can more easily extract information from it - thank you.)

@swill
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swill commented Jun 15, 2021

Hey @kevin-bates, thanks for the response.

So it seems like the kernel starts, but the client can't connect to it. It always shows as Connecting in the UI and I get the following in the logs.

[I 2021-06-15 14:49:18.677 LabApp] Build is up to date
[I 2021-06-15 14:49:18.679 SingleUserNotebookApp log:189] 200 GET /user/jovyan/lab/api/build?1623768557220 (jovyan@10.1.2.1) 1299.82ms
[I 2021-06-15 14:49:18.717 SingleUserNotebookApp log:189] 200 GET /user/jovyan/lab/api/settings/@jupyterlab/docmanager-extension:plugin?1623768557402 (jovyan@10.1.2.1) 4.42ms
[I 2021-06-15 14:49:18.801 SingleUserNotebookApp log:189] 200 GET /user/jovyan/lab/api/settings?1623768558758 (jovyan@10.1.2.1) 26.29ms
[I 2021-06-15 14:49:18.871 SingleUserNotebookApp log:189] 200 GET /user/jovyan/lab/api/settings/@jupyterlab/shortcuts-extension:shortcuts?1623768558840 (jovyan@10.1.2.1) 7.08ms
[I 2021-06-15 14:49:19.324 SingleUserNotebookApp log:189] 204 PUT /user/jovyan/lab/api/workspaces/auto-w?1623768559294 (jovyan@10.1.2.1) 2.54ms
[I 2021-06-15 14:49:19.405 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/contents?content=1&1623768559388 (jovyan@10.1.2.1) 2.54ms
[I 2021-06-15 14:49:19.925 SingleUserNotebookApp log:189] 204 PUT /user/jovyan/lab/api/workspaces/auto-w?1623768559901 (jovyan@10.1.2.1) 2.75ms
[I 2021-06-15 14:49:25.345 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/sessions?1623768565322 (jovyan@10.1.2.1) 1.88ms
[I 2021-06-15 14:49:25.353 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/kernels?1623768565326 (jovyan@10.1.2.1) 2.36ms
[I 2021-06-15 14:49:25.355 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/terminals?1623768565331 (jovyan@10.1.2.1) 3.30ms
[I 2021-06-15 14:49:29.452 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/contents?content=1&1623768569423 (jovyan@10.1.2.1) 3.37ms
[I 2021-06-15 14:49:35.386 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/sessions?1623768575362 (jovyan@10.1.2.1) 1.78ms
[I 2021-06-15 14:49:35.393 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/kernels?1623768575371 (jovyan@10.1.2.1) 1.15ms
[I 2021-06-15 14:49:35.394 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/terminals?1623768575373 (jovyan@10.1.2.1) 1.19ms
[I 2021-06-15 14:49:39.495 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/contents?content=1&1623768579472 (jovyan@10.1.2.1) 2.55ms
[I 2021-06-15 14:49:45.425 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/sessions?1623768585402 (jovyan@10.1.2.1) 2.22ms
[I 2021-06-15 14:49:45.430 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/kernels?1623768585408 (jovyan@10.1.2.1) 1.29ms
[I 2021-06-15 14:49:45.434 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/terminals?1623768585409 (jovyan@10.1.2.1) 3.06ms
[I 2021-06-15 14:49:49.537 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/contents?content=1&1623768589516 (jovyan@10.1.2.1) 4.31ms
[I 2021-06-15 14:49:51.312 SingleUserNotebookApp handlers:153] Creating new notebook in 
[I 2021-06-15 14:49:51.355 SingleUserNotebookApp log:189] 201 POST /user/jovyan/api/contents?1623768591164 (jovyan@10.1.2.1) 44.38ms
[I 2021-06-15 14:49:51.407 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/contents/Untitled.ipynb?content=0&1623768591378 (jovyan@10.1.2.1) 2.92ms
[I 2021-06-15 14:49:51.410 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/contents?content=1&1623768591382 (jovyan@10.1.2.1) 2.21ms
[I 2021-06-15 14:49:51.498 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/contents/Untitled.ipynb?type=notebook&content=1&1623768591464 (jovyan@10.1.2.1) 18.71ms
[I 2021-06-15 14:49:51.590 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/contents/Untitled.ipynb/checkpoints?1623768591571 (jovyan@10.1.2.1) 2.14ms
[I 2021-06-15 14:49:51.591 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/contents/Untitled.ipynb/checkpoints?1623768591572 (jovyan@10.1.2.1) 1.21ms
[I 2021-06-15 14:49:51.595 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/contents/Untitled.ipynb/checkpoints?1623768591577 (jovyan@10.1.2.1) 1.18ms
[I 2021-06-15 14:49:51.661 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/sessions?1623768591644 (jovyan@10.1.2.1) 1.52ms
[I 2021-06-15 14:49:51.729 SingleUserNotebookApp kernelmanager:179] Kernel started: 86b78267-a4fb-4159-8d36-2c32703fc44b, name: python3
[I 2021-06-15 14:49:51.731 SingleUserNotebookApp log:189] 201 POST /user/jovyan/api/sessions?1623768591692 (jovyan@10.1.2.1) 17.25ms
[I 2021-06-15 14:49:51.789 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/sessions?1623768591761 (jovyan@10.1.2.1) 2.24ms
[I 2021-06-15 14:49:51.837 SingleUserNotebookApp log:189] 200 PATCH /user/jovyan/api/sessions/71a327fc-3024-4683-a57f-59e9031d9452?1623768591813 (jovyan@10.1.2.1) 2.31ms
[I 2021-06-15 14:49:51.857 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/kernels?1623768591830 (jovyan@10.1.2.1) 2.83ms
[I 2021-06-15 14:49:51.879 SingleUserNotebookApp log:189] 200 PATCH /user/jovyan/api/sessions/71a327fc-3024-4683-a57f-59e9031d9452?1623768591852 (jovyan@10.1.2.1) 4.85ms
[I 2021-06-15 14:49:51.882 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/sessions?1623768591860 (jovyan@10.1.2.1) 1.33ms
[I 2021-06-15 14:49:51.917 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/kernelspecs?1623768591893 (jovyan@10.1.2.1) 4.19ms
[I 2021-06-15 14:49:52.053 SingleUserNotebookApp log:189] 204 PUT /user/jovyan/lab/api/workspaces/auto-w?1623768592034 (jovyan@10.1.2.1) 2.32ms
[W 2021-06-15 14:49:52.342 SingleUserNotebookApp log:189] 400 GET /user/jovyan/api/kernels/86b78267-a4fb-4159-8d36-2c32703fc44b/channels?session_id=1efd1a4b-03d2-4858-ac17-5f8000cbb5fe (jovyan@10.1.2.1) 471.20ms
[W 2021-06-15 14:49:52.726 SingleUserNotebookApp log:189] 400 GET /user/jovyan/api/kernels/86b78267-a4fb-4159-8d36-2c32703fc44b/channels?session_id=21aac8ff-a2a1-480c-8925-7d13795fb83b (jovyan@10.1.2.1) 2.72ms
[W 2021-06-15 14:49:53.241 SingleUserNotebookApp log:189] 400 GET /user/jovyan/api/kernels/86b78267-a4fb-4159-8d36-2c32703fc44b/channels?session_id=04c17e6e-3a65-43f6-95da-5689d4296aa2 (jovyan@10.1.2.1) 3.41ms
[W 2021-06-15 14:49:53.981 SingleUserNotebookApp handlers:367] Replacing stale connection: 86b78267-a4fb-4159-8d36-2c32703fc44b:1efd1a4b-03d2-4858-ac17-5f8000cbb5fe
[I 2021-06-15 14:49:55.473 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/terminals?1623768595450 (jovyan@10.1.2.1) 1.61ms
[I 2021-06-15 14:50:01.572 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/contents?content=1&1623768601549 (jovyan@10.1.2.1) 3.49ms
[I 2021-06-15 14:50:01.892 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/kernels?1623768601873 (jovyan@10.1.2.1) 1.59ms
[I 2021-06-15 14:50:01.936 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/sessions?1623768601913 (jovyan@10.1.2.1) 1.77ms
[I 2021-06-15 14:50:05.532 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/terminals?1623768605499 (jovyan@10.1.2.1) 2.05ms
[I 2021-06-15 14:50:11.620 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/contents?content=1&1623768611596 (jovyan@10.1.2.1) 2.27ms
[I 2021-06-15 14:50:11.927 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/kernels?1623768611910 (jovyan@10.1.2.1) 1.77ms
[I 2021-06-15 14:50:11.973 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/sessions?1623768611956 (jovyan@10.1.2.1) 1.83ms
[W 2021-06-15 14:50:15.008 SingleUserNotebookApp handlers:367] Replacing stale connection: 86b78267-a4fb-4159-8d36-2c32703fc44b:21aac8ff-a2a1-480c-8925-7d13795fb83b
[I 2021-06-15 14:50:15.583 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/terminals?1623768615561 (jovyan@10.1.2.1) 1.54ms
[I 2021-06-15 14:50:16.357 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/kernelspecs?1623768616335 (jovyan@10.1.2.1) 3.47ms
[I 2021-06-15 14:50:21.666 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/contents?content=1&1623768621640 (jovyan@10.1.2.1) 2.33ms
[I 2021-06-15 14:50:21.966 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/kernels?1623768621942 (jovyan@10.1.2.1) 2.41ms
[I 2021-06-15 14:50:22.012 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/sessions?1623768621989 (jovyan@10.1.2.1) 1.66ms
[I 2021-06-15 14:50:25.630 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/terminals?1623768625609 (jovyan@10.1.2.1) 1.58ms
[I 2021-06-15 14:50:26.466 SingleUserNotebookApp log:189] 204 PUT /user/jovyan/lab/api/workspaces/auto-w?1623768626439 (jovyan@10.1.2.1) 2.42ms
[I 2021-06-15 14:50:28.653 SingleUserNotebookApp log:189] 204 PUT /user/jovyan/lab/api/workspaces/auto-w?1623768628620 (jovyan@10.1.2.1) 2.01ms
[I 2021-06-15 14:50:31.715 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/contents?content=1&1623768631691 (jovyan@10.1.2.1) 2.41ms
[I 2021-06-15 14:50:32.002 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/kernels?1623768631986 (jovyan@10.1.2.1) 1.67ms
[I 2021-06-15 14:50:32.055 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/sessions?1623768632032 (jovyan@10.1.2.1) 2.45ms
[I 2021-06-15 14:50:35.682 SingleUserNotebookApp log:189] 200 GET /user/jovyan/api/terminals?1623768635652 (jovyan@10.1.2.1) 2.15ms
[W 2021-06-15 14:50:36.537 SingleUserNotebookApp handlers:367] Replacing stale connection: 86b78267-a4fb-4159-8d36-2c32703fc44b:04c17e6e-3a65-43f6-95da-5689d4296aa2

Any insights would be appreciated. Thanks...

@kevin-bates
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Hmm. I suspect the websocket connection is not getting established. The output implies the notebook server is being started via Hub. To reduce interference, are you able to run the image directly using something like the following:

docker run -it --rm -p 8888:8888 jupyter/all-spark-notebook

then enter the displayed URL beginning with http://127.0.0.1:8888 in your browser and try to create any of the three kernels?

It might also be helpful to enable debug logging. One way to do that is to just give the complete command in the docker run...

docker run -it --rm -p 8888:8888 jupyter/all-spark-notebook jupyter notebook --debug

When I run that, I see the following surrounding the 'kernel started' info message:

[D 15:29:04.222 NotebookApp] Starting kernel: ['/opt/conda/bin/python', '-m', 'ipykernel_launcher', '-f', '/home/jovyan/.local/share/jupyter/runtime/kernel-ffc8fc81-f4db-4865-a400-cfa86bda9ac3.json']
[D 15:29:04.231 NotebookApp] Connecting to: tcp://127.0.0.1:56767
[D 15:29:04.233 NotebookApp] Connecting to: tcp://127.0.0.1:55243
[I 15:29:04.239 NotebookApp] Kernel started: ffc8fc81-f4db-4865-a400-cfa86bda9ac3, name: python3
[D 15:29:04.239 NotebookApp] Kernel args: {'kernel_name': 'python3', 'cwd': '/home/jovyan'}
[D 15:29:04.244 NotebookApp] Path components/MathJax/extensions/Safe.js served from /opt/conda/lib/python3.9/site-packages/notebook/static/components/MathJax/extensions/Safe.js
[D 15:29:04.246 NotebookApp] 304 GET /static/components/MathJax/extensions/Safe.js?V=2.7.9 (172.17.0.1) 4.350000ms
[D 15:29:04.248 NotebookApp] 201 POST /api/sessions (172.17.0.1) 85.720000ms
[D 15:29:04.477 NotebookApp] Initializing websocket connection /api/kernels/ffc8fc81-f4db-4865-a400-cfa86bda9ac3/channels
[D 15:29:04.480 NotebookApp] Requesting kernel info from ffc8fc81-f4db-4865-a400-cfa86bda9ac3
[D 15:29:04.481 NotebookApp] Connecting to: tcp://127.0.0.1:35863
[D 15:29:04.801 NotebookApp] activity on ffc8fc81-f4db-4865-a400-cfa86bda9ac3: status (starting)
[D 15:29:04.827 NotebookApp] activity on ffc8fc81-f4db-4865-a400-cfa86bda9ac3: status (busy)
[D 15:29:04.828 NotebookApp] activity on ffc8fc81-f4db-4865-a400-cfa86bda9ac3: status (idle)
[D 15:29:04.828 NotebookApp] Received kernel info: {'status': 'ok', 'protocol_version': '5.3', 'implementation': 'ipython', 'implementation_version': '7.24.1', 'language_info': {'name': 'python', 'version': '3.9.4', 'mimetype': 'text/x-python', 'codemirror_mode': {'name': 'ipython', 'version': 3}, 'pygments_lexer': 'ipython3', 'nbconvert_exporter': 'python', 'file_extension': '.py'}, 'banner': "Python 3.9.4 | packaged by conda-forge | (default, May 10 2021, 22:13:33) \nType 'copyright', 'credits' or 'license' for more information\nIPython 7.24.1 -- An enhanced Interactive Python. Type '?' for help.\n", 'help_links': [{'text': 'Python Reference', 'url': 'https://docs.python.org/3.9'}, {'text': 'IPython Reference', 'url': 'https://ipython.org/documentation.html'}, {'text': 'NumPy Reference', 'url': 'https://docs.scipy.org/doc/numpy/reference/'}, {'text': 'SciPy Reference', 'url': 'https://docs.scipy.org/doc/scipy/reference/'}, {'text': 'Matplotlib Reference', 'url': 'https://matplotlib.org/contents.html'}, {'text': 'SymPy Reference', 'url': 'http://docs.sympy.org/latest/index.html'}, {'text': 'pandas Reference', 'url': 'https://pandas.pydata.org/pandas-docs/stable/'}]}
[D 15:29:04.830 NotebookApp] 101 GET /api/kernels/ffc8fc81-f4db-4865-a400-cfa86bda9ac3/channels?session_id=702535f4120a48028439a1ee966393c7 (172.17.0.1) 353.640000ms
[D 15:29:04.830 NotebookApp] Opening websocket /api/kernels/ffc8fc81-f4db-4865-a400-cfa86bda9ac3/channels
[D 15:29:04.831 NotebookApp] Getting buffer for ffc8fc81-f4db-4865-a400-cfa86bda9ac3
[D 15:29:04.832 NotebookApp] Connecting to: tcp://127.0.0.1:55243
[D 15:29:04.833 NotebookApp] Connecting to: tcp://127.0.0.1:35863
[D 15:29:04.836 NotebookApp] Connecting to: tcp://127.0.0.1:56767
[D 15:29:04.838 NotebookApp] Connecting to: tcp://127.0.0.1:39159
[D 15:29:04.840 NotebookApp] Connecting to: tcp://127.0.0.1:35863
[D 15:29:04.842 NotebookApp] Nudge: attempt 1 on kernel ffc8fc81-f4db-4865-a400-cfa86bda9ac3
[D 15:29:04.850 NotebookApp] activity on ffc8fc81-f4db-4865-a400-cfa86bda9ac3: status (busy)
[D 15:29:04.850 NotebookApp] Nudge: IOPub received: ffc8fc81-f4db-4865-a400-cfa86bda9ac3
[D 15:29:04.850 NotebookApp] Nudge: resolving iopub future: ffc8fc81-f4db-4865-a400-cfa86bda9ac3
[D 15:29:04.851 NotebookApp] activity on ffc8fc81-f4db-4865-a400-cfa86bda9ac3: status (idle)
[D 15:29:04.852 NotebookApp] Nudge: shell info reply received: ffc8fc81-f4db-4865-a400-cfa86bda9ac3
[D 15:29:04.852 NotebookApp] Nudge: resolving shell future: ffc8fc81-f4db-4865-a400-cfa86bda9ac3
[D 15:29:04.858 NotebookApp] activity on ffc8fc81-f4db-4865-a400-cfa86bda9ac3: status (busy)
[D 15:29:04.862 NotebookApp] activity on ffc8fc81-f4db-4865-a400-cfa86bda9ac3: status (idle)
[D 15:29:04.866 NotebookApp] activity on ffc8fc81-f4db-4865-a400-cfa86bda9ac3: status (busy)
[D 15:29:04.872 NotebookApp] activity on ffc8fc81-f4db-4865-a400-cfa86bda9ac3: status (idle)

It might be helpful to compare this output to yours.

@swill
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swill commented Jun 15, 2021

Thank you, that was the tip I needed. I upgraded my nginx config to upgrade to use websockets and now it connects and runs as expected. I appreciate you taking the time to point me in the right direction. Sorry for polluting this thread.

@kevin-bates
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No worries - glad to hear you're moving forward!

I think it might be best to close this issue anyway due to its staleness and lack of details. It's easy to lump a general error message into the same bucket when it can be any number of things. In addition, the advice to downgrade relative to one and two-year versions is not prudent today.

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