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Maybe you need to restart your R session? It is there. > sessionInfo()
R version 4.2.0 (2022-04-22)
Platform: x86_64-apple-darwin17.0 (64-bit)
Running under: macOS Big Sur/Monterey 10.16
Matrix products: default
BLAS: /Library/Frameworks/R.framework/Versions/4.2/Resources/lib/libRblas.0.dylib
LAPACK: /Library/Frameworks/R.framework/Versions/4.2/Resources/lib/libRlapack.dylib
locale:
[1] C/UTF-8/C/C/C/C
attached base packages:
[1] grid stats graphics grDevices utils datasets methods
[8] base
other attached packages:
[1] ComplexHeatmap_2.13.2 colorout_1.2-2
loaded via a namespace (and not attached):
[1] circlize_0.4.16 matrixStats_0.62.0 codetools_0.2-18
[4] IRanges_2.30.0 png_0.1-7 digest_0.6.29
[7] foreach_1.5.2 crayon_1.5.1 stats4_4.2.0
[10] GlobalOptions_0.1.2 doParallel_1.0.17 S4Vectors_0.34.0
[13] GetoptLong_1.1.0 RColorBrewer_1.1-3 rjson_0.2.21
[16] iterators_1.0.14 parallel_4.2.0 compiler_4.2.0
[19] clue_0.3-61 colorspace_2.0-3 BiocGenerics_0.42.0
[22] cluster_2.1.3 shape_1.4.6
> anno_numeric
function (x, rg = range(x), labels_gp = gpar(), x_convert = NULL,
labels_format = NULL, labels_offset = unit(4, "pt"), bg_gp = gpar(fill = "#8080FF",
col = "#8080FF"), bar_width = unit(1, "npc") - unit(4,
"pt"), round_corners = TRUE, r = unit(0.05, "snpc"),
which = c("row", "column"), align_to = "left", width = NULL)
{
which = match.arg(which)[1]
if (which == "column") {
stop_wrap("`anno_numeric()` can only be used as row annotation.")
}
if (!is.numeric(x)) {
stop_wrap("Input for `anno_numeric()` should be a numeric vector.")
}
if (!is.null(labels_format)) {
labels = labels_format(x)
} |
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I can still get the content of anno_numeric() in ComplexHeatmap document, but I can't use this function in RStudio, my package version is 2.13.2.
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