windows-build.yml

name: Windows/MinGW-W64 CI
on: [push, pull_request]

jobs:
  build-mingw64:
    runs-on: windows-latest
    steps:
    - name: Checkout
      uses: actions/checkout@v4
      with:
        submodules: true
    - name: Set up MSYS2 MinGW-W64
      uses: msys2/setup-msys2@v2
      with:
        msystem: mingw64
        update: false
        install: >-
          git
          zlib-devel
          libbz2-devel
          liblzma-devel
          mingw-w64-x86_64-toolchain
          mingw-w64-x86_64-autotools
          mingw-w64-x86_64-tools-git
          mingw-w64-x86_64-libdeflate
    - name: Compile htslib
      shell: msys2 {0}
      run: |
        export PATH=/mingw64/bin:$PATH
        export MSYSTEM=MINGW64
        autoreconf -i
        ./configure
        make -j6
    - name: Check Htslib
      shell: msys2 {0}
      run: |
        export PATH=/mingw64/bin:$PATH
        export MSYSTEM=MINGW64
        make test-shlib-exports && make check

  build-clang:
    runs-on: windows-latest
    steps:
    - name: Checkout
      uses: actions/checkout@v4
      with:
        submodules: true
    - name: Set up MSYS2 MinGW-W64
      uses: msys2/setup-msys2@v2
      with:
        msystem: clang
        update: false
        install: >-
          git
          zlib-devel
          libbz2-devel
          liblzma-devel
          mingw-w64-clang-x86_64-toolchain
          mingw-w64-clang-x86_64-autotools
          mingw-w64-clang-x86_64-tools-git
          mingw-w64-clang-x86_64-libdeflate
    - name: Compile htslib
      shell: msys2 {0}
      run: |
        export PATH=/clang64/bin:$PATH
        export MSYSTEM=CLANG64
        autoreconf -i
        ./configure CC="clang -fsanitize=address,undefined"
        make -j6
    - name: Check Htslib
      shell: msys2 {0}
      run: |
        export PATH=/clang64/bin:$PATH
        export MSYSTEM=CLANG64
        make test-shlib-exports && make check