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@DesWurstes Thank you for providing a test case so I have something to work with. In your example, shouldn't the last line be the header row?
id,ln,tr,en,fr,de,ru,pid,tags,notes
At any rate, it looks like the first issue is caused by the multiline cell at the end of the first data row not having any content on the second line. If I precede the lone quote mark with a single character, modifying a cell works as expected. I use regular expressions to parse line/column breaks, and this appears to be an edge case that is not accounted for. I suspect that it causes the other issues as well. Still investigating.
Example file:
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