polyclonal is a Python package for modeling mutational escape from polyclonal antibodies using deep mutational scanning data.
It is written by the Bloom lab.
See Yu et al (2022) for an explanation of the approach implemented in polyclonal.
See below for information and examples of how to use this package.
.. toctree:: :hidden: self
.. toctree:: :maxdepth: 1 installation biophysical_model visualize_RBD simulate_RBD fit_RBD fit_2epitope regularization RBD_average real_LyCoV1404 reference_site_numbering real_cocktail specify_epitopes expt_design optimization partition_function polyclonal package_index acknowledgments