diff --git a/src/test/scala/is/hail/methods/SkatSuite.scala b/src/test/scala/is/hail/methods/SkatSuite.scala index 948f15407fa..92de7ec0e43 100644 --- a/src/test/scala/is/hail/methods/SkatSuite.scala +++ b/src/test/scala/is/hail/methods/SkatSuite.scala @@ -7,7 +7,7 @@ import scala.io.Source import is.hail.expr._ import is.hail.SparkSuite import is.hail.io.annotators.IntervalList -import is.hail.variant.{GenomeReference, Genotype, VariantDataset} +import is.hail.variant.{ReferenceGenome, Genotype, VariantDataset} import is.hail.methods.Skat.keyedRDDSkat import is.hail.annotations.Annotation @@ -354,7 +354,7 @@ class SkatSuite extends SparkSuite { def intervalsSkat = IntervalList.read(hc, "src/test/resources/skat.interval_list") - val rg = GenomeReference.GRCh37 + val rg = ReferenceGenome.GRCh37 def weightsSkat = hc.importTable("src/test/resources/skat.weights", types = Map("locus" -> TLocus(rg), "weight" -> TFloat64)).keyBy("locus")