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Data visualization when inferring a polyclonal model #50

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Psrwnsr opened this issue Jul 19, 2021 · 0 comments
Open

Data visualization when inferring a polyclonal model #50

Psrwnsr opened this issue Jul 19, 2021 · 0 comments

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@Psrwnsr
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Psrwnsr commented Jul 19, 2021

Dear ClonEvol team & community
I have an issue when visualizing the ClonEvol data, could you please give me some suggestion to solving these problem below? I already attached my results in the forum

  1. How to remove gene name of cluster 0 when inferring a polyclonal model? (The box plot model on the left)
  2. What does the length of each cluster in branch-based tree model means? also when inferring a polyclonal model, was the length of cluster 0 meaningful? (the blue line). For examples, the length based cancer initiation time? frequency? or it’s just an uncertainty line to fit a length of model? (The branch-based tree model on the right)

Screen Shot 2564-07-19 at 14 53 51

Thank you in advance for your help

@Psrwnsr Psrwnsr changed the title Data visualizing when inferring a polyclonal model Data visualization when inferring a polyclonal model Jul 19, 2021
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