Chris_kk_splicing.ipynb

{
 "metadata": {
  "name": "",
  "signature": "sha256:32f787b8c30944c1b3c600febe2f28226213f2362ceee4e8d004f46827086f97"
 },
 "nbformat": 3,
 "nbformat_minor": 0,
 "worksheets": [
  {
   "cells": [
    {
     "cell_type": "code",
     "collapsed": false,
     "input": [
      "import pandas as pd"
     ],
     "language": "python",
     "metadata": {},
     "outputs": [],
     "prompt_number": 1
    },
    {
     "cell_type": "code",
     "collapsed": false,
     "input": [
      "df = pd.read_table(\"/nas3/gpratt/projects/splicing/data/all.csv\")"
     ],
     "language": "python",
     "metadata": {},
     "outputs": [],
     "prompt_number": 6
    },
    {
     "cell_type": "code",
     "collapsed": false,
     "input": [
      "df[~(df.mjay_sepscore_yeo_july14_BrD_BrB == df.mjay_sepscore_yeo_july14_ELAVD_SCB)][['mjay_sepscore_yeo_july14_BrD_BrB']]"
     ],
     "language": "python",
     "metadata": {},
     "outputs": [
      {
       "html": [
        "<div style=\"max-height:1000px;max-width:1500px;overflow:auto;\">\n",
        "<table border=\"1\" class=\"dataframe\">\n",
        "  <thead>\n",
        "    <tr style=\"text-align: right;\">\n",
        "      <th></th>\n",
        "      <th>mjay_sepscore_yeo_july14_BrD_BrB</th>\n",
        "    </tr>\n",
        "  </thead>\n",
        "  <tbody>\n",
        "    <tr>\n",
        "      <th>162 </th>\n",
        "      <td>             Cnpy1_1_s0e5_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>249 </th>\n",
        "      <td>                           NaN</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>288 </th>\n",
        "      <td>                           NaN</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>306 </th>\n",
        "      <td>            Uaca_(508)_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>338 </th>\n",
        "      <td>                           NaN</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>422 </th>\n",
        "      <td>            Tsr1_(104)_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>565 </th>\n",
        "      <td>          Zdhhc12_(41)_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>664 </th>\n",
        "      <td>                           NaN</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>686 </th>\n",
        "      <td>            Gprc5c_1_s0e5_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>804 </th>\n",
        "      <td>                           NaN</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>814 </th>\n",
        "      <td>   1700026L06Rik_(148)_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>916 </th>\n",
        "      <td>                           NaN</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>942 </th>\n",
        "      <td>            Cish_(221)_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>995 </th>\n",
        "      <td>           Dnalc4_(67)_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>1153</th>\n",
        "      <td>          Chrnd_1_s0e4_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>1166</th>\n",
        "      <td>              Il17re_(96)_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>1207</th>\n",
        "      <td>              Banf2_(119)_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>1241</th>\n",
        "      <td>             Hsd3b1_(190)_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>1400</th>\n",
        "      <td>                           NaN</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>1527</th>\n",
        "      <td>                           NaN</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>1541</th>\n",
        "      <td>        Etnk2_3_s10e18_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>1547</th>\n",
        "      <td>                           NaN</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>1716</th>\n",
        "      <td>          Slc18a1_(29)_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>1797</th>\n",
        "      <td>             Nsl1_1_s7e14_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>1884</th>\n",
        "      <td>    2310040C09Rik_2_s4e14_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>1910</th>\n",
        "      <td>        Dlx6os1_1_s0e5_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>1980</th>\n",
        "      <td>                           NaN</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>2085</th>\n",
        "      <td>                           NaN</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>2197</th>\n",
        "      <td>                           NaN</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>2217</th>\n",
        "      <td>                           NaN</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>2363</th>\n",
        "      <td>                           NaN</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>2470</th>\n",
        "      <td>               Espn_(492)_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>2528</th>\n",
        "      <td>      Rab11fip1_(1563)_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>2643</th>\n",
        "      <td>                           NaN</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>2765</th>\n",
        "      <td>        Pard3b_1_s3e20_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>2860</th>\n",
        "      <td>           Cmtm2a_1_s0e11_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>3038</th>\n",
        "      <td>            Cnpy1_2_s7e11_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>3154</th>\n",
        "      <td>                           NaN</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>3351</th>\n",
        "      <td>         Gtf2a1_1_s0e5_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>3443</th>\n",
        "      <td>             Limd2_1_s0e5_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>3528</th>\n",
        "      <td>           Garnl1_(31)_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>3539</th>\n",
        "      <td>                           NaN</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>3542</th>\n",
        "      <td>           H2-Aa_(233)_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>3647</th>\n",
        "      <td>              Sorbs3_(44)_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>3981</th>\n",
        "      <td>         BC049762_(88)_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>4042</th>\n",
        "      <td>                           NaN</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>4055</th>\n",
        "      <td> 1200003I07Rik_1_s2e10_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>4077</th>\n",
        "      <td>                           NaN</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>4136</th>\n",
        "      <td>               Med24_(57)_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>4146</th>\n",
        "      <td>       4930404N11Rik_(72)_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>4155</th>\n",
        "      <td>          Pard3b_(186)_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>4235</th>\n",
        "      <td>                           NaN</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>4243</th>\n",
        "      <td>          Asphd2_(215)_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>4254</th>\n",
        "      <td>            Sh3tc1_1_s0e5_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>4403</th>\n",
        "      <td>                           NaN</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>4440</th>\n",
        "      <td>    4930519G04Rik_1_s0e13_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>4449</th>\n",
        "      <td>          Hsd11b2_(41)_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>4615</th>\n",
        "      <td>           Itih4_(117)_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>4675</th>\n",
        "      <td>            Clec16a_(124)_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>4786</th>\n",
        "      <td>             Hsd11b2_(41)_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th></th>\n",
        "      <td>...</td>\n",
        "    </tr>\n",
        "  </tbody>\n",
        "</table>\n",
        "<p>345 rows \u00d7 1 columns</p>\n",
        "</div>"
       ],
       "metadata": {},
       "output_type": "pyout",
       "prompt_number": 14,
       "text": [
        "     mjay_sepscore_yeo_july14_BrD_BrB\n",
        "162                 Cnpy1_1_s0e5_skip\n",
        "249                               NaN\n",
        "288                               NaN\n",
        "306                Uaca_(508)_include\n",
        "338                               NaN\n",
        "422                Tsr1_(104)_include\n",
        "565              Zdhhc12_(41)_include\n",
        "664                               NaN\n",
        "686                Gprc5c_1_s0e5_skip\n",
        "804                               NaN\n",
        "814       1700026L06Rik_(148)_include\n",
        "916                               NaN\n",
        "942                Cish_(221)_include\n",
        "995               Dnalc4_(67)_include\n",
        "1153             Chrnd_1_s0e4_include\n",
        "1166                 Il17re_(96)_skip\n",
        "1207                 Banf2_(119)_skip\n",
        "1241                Hsd3b1_(190)_skip\n",
        "1400                              NaN\n",
        "1527                              NaN\n",
        "1541           Etnk2_3_s10e18_include\n",
        "1547                              NaN\n",
        "1716             Slc18a1_(29)_include\n",
        "1797                Nsl1_1_s7e14_skip\n",
        "1884       2310040C09Rik_2_s4e14_skip\n",
        "1910           Dlx6os1_1_s0e5_include\n",
        "1980                              NaN\n",
        "2085                              NaN\n",
        "2197                              NaN\n",
        "2217                              NaN\n",
        "2363                              NaN\n",
        "2470                  Espn_(492)_skip\n",
        "2528         Rab11fip1_(1563)_include\n",
        "2643                              NaN\n",
        "2765           Pard3b_1_s3e20_include\n",
        "2860              Cmtm2a_1_s0e11_skip\n",
        "3038               Cnpy1_2_s7e11_skip\n",
        "3154                              NaN\n",
        "3351            Gtf2a1_1_s0e5_include\n",
        "3443                Limd2_1_s0e5_skip\n",
        "3528              Garnl1_(31)_include\n",
        "3539                              NaN\n",
        "3542              H2-Aa_(233)_include\n",
        "3647                 Sorbs3_(44)_skip\n",
        "3981            BC049762_(88)_include\n",
        "4042                              NaN\n",
        "4055    1200003I07Rik_1_s2e10_include\n",
        "4077                              NaN\n",
        "4136                  Med24_(57)_skip\n",
        "4146          4930404N11Rik_(72)_skip\n",
        "4155             Pard3b_(186)_include\n",
        "4235                              NaN\n",
        "4243             Asphd2_(215)_include\n",
        "4254               Sh3tc1_1_s0e5_skip\n",
        "4403                              NaN\n",
        "4440       4930519G04Rik_1_s0e13_skip\n",
        "4449             Hsd11b2_(41)_include\n",
        "4615              Itih4_(117)_include\n",
        "4675               Clec16a_(124)_skip\n",
        "4786                Hsd11b2_(41)_skip\n",
        "                                  ...\n",
        "\n",
        "[345 rows x 1 columns]"
       ]
      }
     ],
     "prompt_number": 14
    },
    {
     "cell_type": "code",
     "collapsed": false,
     "input": [
      "BrD_BrB_df = pd.read_table(\"/nas3/gpratt/projects/splicing/data/BrD_BrB.csv\")"
     ],
     "language": "python",
     "metadata": {},
     "outputs": [],
     "prompt_number": 16
    },
    {
     "cell_type": "code",
     "collapsed": false,
     "input": [
      "BrD_BrB_df"
     ],
     "language": "python",
     "metadata": {},
     "outputs": [
      {
       "html": [
        "<div style=\"max-height:1000px;max-width:1500px;overflow:auto;\">\n",
        "<table border=\"1\" class=\"dataframe\">\n",
        "  <thead>\n",
        "    <tr style=\"text-align: right;\">\n",
        "      <th></th>\n",
        "      <th>Gene</th>\n",
        "      <th>path</th>\n",
        "      <th>event position</th>\n",
        "      <th>event name</th>\n",
        "      <th>notes</th>\n",
        "      <th>mjay_sepscore_yeo_july14_BrD_BrB</th>\n",
        "      <th>mjay_sepscore_yeo_july14_BrD_BrB_sepscore</th>\n",
        "      <th>mjay_sepscore_yeo_july14_BrD_BrB_q-value</th>\n",
        "      <th>mjay_sepscore_yeo_july14_BrD_BrB_skipA</th>\n",
        "      <th>mjay_sepscore_yeo_july14_BrD_BrB_skipB</th>\n",
        "      <th>mjay_sepscore_yeo_july14_BrD_BrB_inclA</th>\n",
        "      <th>mjay_sepscore_yeo_july14_BrD_BrB_inclB </th>\n",
        "    </tr>\n",
        "  </thead>\n",
        "  <tbody>\n",
        "    <tr>\n",
        "      <th>0 </th>\n",
        "      <td>          Ktn1</td>\n",
        "      <td> in</td>\n",
        "      <td>   chr14:48323952-48325437:+</td>\n",
        "      <td>             Ktn1_(69)</td>\n",
        "      <td> alt_cassette </td>\n",
        "      <td>             Ktn1_(69)_include</td>\n",
        "      <td>-0.171</td>\n",
        "      <td> 0.374</td>\n",
        "      <td>  127</td>\n",
        "      <td>  129</td>\n",
        "      <td>  110</td>\n",
        "      <td>  110</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>1 </th>\n",
        "      <td>          Gas5</td>\n",
        "      <td> in</td>\n",
        "      <td>  chr1:162966375-162966679:+</td>\n",
        "      <td>            Gas5_(302)</td>\n",
        "      <td> retained_int </td>\n",
        "      <td>            Gas5_(302)_include</td>\n",
        "      <td>-0.037</td>\n",
        "      <td> 0.321</td>\n",
        "      <td>  287</td>\n",
        "      <td>  278</td>\n",
        "      <td>  149</td>\n",
        "      <td>  137</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>2 </th>\n",
        "      <td>        Agpat9</td>\n",
        "      <td> sk</td>\n",
        "      <td>  chr5:101275247-101275490:+</td>\n",
        "      <td>         Agpat9_1_s0e4</td>\n",
        "      <td>    alt_start </td>\n",
        "      <td>            Agpat9_1_s0e4_skip</td>\n",
        "      <td> 0.151</td>\n",
        "      <td> 0.247</td>\n",
        "      <td>   88</td>\n",
        "      <td>   90</td>\n",
        "      <td>  170</td>\n",
        "      <td>  164</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>3 </th>\n",
        "      <td>          Mpp5</td>\n",
        "      <td> in</td>\n",
        "      <td>   chr12:79849897-79895231:+</td>\n",
        "      <td>           Mpp5_1_s0e5</td>\n",
        "      <td>    alt_start </td>\n",
        "      <td>           Mpp5_1_s0e5_include</td>\n",
        "      <td>-0.017</td>\n",
        "      <td> 0.419</td>\n",
        "      <td>  226</td>\n",
        "      <td>  232</td>\n",
        "      <td> 3023</td>\n",
        "      <td> 3087</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>4 </th>\n",
        "      <td>         Acot8</td>\n",
        "      <td> in</td>\n",
        "      <td>  chr2:164618510-164620581:-</td>\n",
        "      <td>            Acot8_(96)</td>\n",
        "      <td>        alt_5 </td>\n",
        "      <td>            Acot8_(96)_include</td>\n",
        "      <td>-0.035</td>\n",
        "      <td> 0.196</td>\n",
        "      <td>   55</td>\n",
        "      <td>   60</td>\n",
        "      <td>  404</td>\n",
        "      <td>  419</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>5 </th>\n",
        "      <td>           H13</td>\n",
        "      <td> in</td>\n",
        "      <td>  chr2:152526004-152530357:+</td>\n",
        "      <td>             H13_(200)</td>\n",
        "      <td> alt_cassette </td>\n",
        "      <td>             H13_(200)_include</td>\n",
        "      <td>-0.186</td>\n",
        "      <td> 0.125</td>\n",
        "      <td>  104</td>\n",
        "      <td>  111</td>\n",
        "      <td>  294</td>\n",
        "      <td>  283</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>6 </th>\n",
        "      <td>   D16Ertd472e</td>\n",
        "      <td> sk</td>\n",
        "      <td>   chr16:78576299-78576703:-</td>\n",
        "      <td>      D16Ertd472e_(34)</td>\n",
        "      <td>      complex </td>\n",
        "      <td>         D16Ertd472e_(34)_skip</td>\n",
        "      <td>-0.487</td>\n",
        "      <td> 0.333</td>\n",
        "      <td>   66</td>\n",
        "      <td>   66</td>\n",
        "      <td>  135</td>\n",
        "      <td>  153</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>7 </th>\n",
        "      <td>       Col25a1</td>\n",
        "      <td> sk</td>\n",
        "      <td>  chr3:130220655-130225350:+</td>\n",
        "      <td>         Col25a1_(27a)</td>\n",
        "      <td> alt_cassette </td>\n",
        "      <td>            Col25a1_(27a)_skip</td>\n",
        "      <td>-0.323</td>\n",
        "      <td> 0.125</td>\n",
        "      <td>  103</td>\n",
        "      <td>   87</td>\n",
        "      <td>  106</td>\n",
        "      <td>  102</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>8 </th>\n",
        "      <td>        Ppfia2</td>\n",
        "      <td> sk</td>\n",
        "      <td> chr10:106364898-106368199:+</td>\n",
        "      <td>           Ppfia2_(92)</td>\n",
        "      <td> alt_cassette </td>\n",
        "      <td>              Ppfia2_(92)_skip</td>\n",
        "      <td>-0.117</td>\n",
        "      <td> 0.201</td>\n",
        "      <td>   60</td>\n",
        "      <td>   52</td>\n",
        "      <td>  511</td>\n",
        "      <td>  515</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>9 </th>\n",
        "      <td>        Mapk14</td>\n",
        "      <td> sk</td>\n",
        "      <td>   chr17:28828389-28850718:+</td>\n",
        "      <td>         Mapk14_1_s0e5</td>\n",
        "      <td>    alt_start </td>\n",
        "      <td>            Mapk14_1_s0e5_skip</td>\n",
        "      <td>-0.211</td>\n",
        "      <td> 0.505</td>\n",
        "      <td>  221</td>\n",
        "      <td>  224</td>\n",
        "      <td> 1102</td>\n",
        "      <td> 1121</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>10</th>\n",
        "      <td> 4922505G16Rik</td>\n",
        "      <td> sk</td>\n",
        "      <td>  chr2:157034285-157090808:-</td>\n",
        "      <td> 4922505G16Rik_1_s7e51</td>\n",
        "      <td>      alt_end </td>\n",
        "      <td>    4922505G16Rik_1_s7e51_skip</td>\n",
        "      <td>-0.098</td>\n",
        "      <td> 0.370</td>\n",
        "      <td>  119</td>\n",
        "      <td>  121</td>\n",
        "      <td>  163</td>\n",
        "      <td>  169</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>11</th>\n",
        "      <td> 2700078K21Rik</td>\n",
        "      <td> in</td>\n",
        "      <td>  chr7:149202077-149202298:-</td>\n",
        "      <td>    2700078K21Rik_(48)</td>\n",
        "      <td>      complex </td>\n",
        "      <td>    2700078K21Rik_(48)_include</td>\n",
        "      <td>-0.049</td>\n",
        "      <td> 0.392</td>\n",
        "      <td>   48</td>\n",
        "      <td>   48</td>\n",
        "      <td>  346</td>\n",
        "      <td>  341</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>12</th>\n",
        "      <td>          Hbp1</td>\n",
        "      <td> sk</td>\n",
        "      <td>   chr12:32615546-32621836:-</td>\n",
        "      <td>         Hbp1_1_s11e18</td>\n",
        "      <td>      alt_end </td>\n",
        "      <td>            Hbp1_1_s11e18_skip</td>\n",
        "      <td> 0.011</td>\n",
        "      <td> 0.546</td>\n",
        "      <td>  211</td>\n",
        "      <td>  198</td>\n",
        "      <td>   99</td>\n",
        "      <td>   93</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>13</th>\n",
        "      <td> 2210009G21Rik</td>\n",
        "      <td> n2</td>\n",
        "      <td>  chr2:136716953-136731278:+</td>\n",
        "      <td>  2210009G21Rik_1_s0e9</td>\n",
        "      <td>     Ncomplex </td>\n",
        "      <td>       2210009G21Rik_1_s0e9_n2</td>\n",
        "      <td>-0.126</td>\n",
        "      <td> 0.242</td>\n",
        "      <td>  138</td>\n",
        "      <td>  137</td>\n",
        "      <td>  157</td>\n",
        "      <td>  165</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>14</th>\n",
        "      <td>       Pacsin3</td>\n",
        "      <td> sk</td>\n",
        "      <td>    chr2:91096321-91100327:+</td>\n",
        "      <td>       Pacsin3_1_s0e10</td>\n",
        "      <td>    alt_start </td>\n",
        "      <td>          Pacsin3_1_s0e10_skip</td>\n",
        "      <td>-0.025</td>\n",
        "      <td> 0.122</td>\n",
        "      <td>  320</td>\n",
        "      <td>  327</td>\n",
        "      <td>  314</td>\n",
        "      <td>  335</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>15</th>\n",
        "      <td> 2410042D21Rik</td>\n",
        "      <td> sk</td>\n",
        "      <td>  chr2:112246490-112254236:+</td>\n",
        "      <td> 2410042D21Rik_1_s7e21</td>\n",
        "      <td>      alt_end </td>\n",
        "      <td>    2410042D21Rik_1_s7e21_skip</td>\n",
        "      <td> 0.271</td>\n",
        "      <td> 0.401</td>\n",
        "      <td>  129</td>\n",
        "      <td>  132</td>\n",
        "      <td>   91</td>\n",
        "      <td>   90</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>16</th>\n",
        "      <td>          Ldb3</td>\n",
        "      <td> sk</td>\n",
        "      <td>   chr14:35339884-35380042:-</td>\n",
        "      <td>         Ldb3_3_s19e36</td>\n",
        "      <td>      alt_end </td>\n",
        "      <td>            Ldb3_3_s19e36_skip</td>\n",
        "      <td> 0.099</td>\n",
        "      <td> 0.044</td>\n",
        "      <td>  116</td>\n",
        "      <td>  122</td>\n",
        "      <td>  184</td>\n",
        "      <td>  179</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>17</th>\n",
        "      <td>        Dixdc1</td>\n",
        "      <td> in</td>\n",
        "      <td>    chr9:50514355-50518947:-</td>\n",
        "      <td>           Dixdc1_(77)</td>\n",
        "      <td>      complex </td>\n",
        "      <td>           Dixdc1_(77)_include</td>\n",
        "      <td> 0.029</td>\n",
        "      <td> 0.275</td>\n",
        "      <td>   65</td>\n",
        "      <td>   67</td>\n",
        "      <td>  160</td>\n",
        "      <td>  174</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>18</th>\n",
        "      <td>          Etv1</td>\n",
        "      <td> sk</td>\n",
        "      <td>   chr12:39506896-39519757:+</td>\n",
        "      <td>          Etv1_1_s0e11</td>\n",
        "      <td>    alt_start </td>\n",
        "      <td>             Etv1_1_s0e11_skip</td>\n",
        "      <td>-0.085</td>\n",
        "      <td> 0.045</td>\n",
        "      <td>  750</td>\n",
        "      <td>  721</td>\n",
        "      <td> 1095</td>\n",
        "      <td> 1140</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>19</th>\n",
        "      <td>          Dmwd</td>\n",
        "      <td> in</td>\n",
        "      <td>    chr7:19661548-19663403:+</td>\n",
        "      <td>           Dmwd_1_s0e4</td>\n",
        "      <td>    alt_start </td>\n",
        "      <td>           Dmwd_1_s0e4_include</td>\n",
        "      <td> 0.209</td>\n",
        "      <td> 0.251</td>\n",
        "      <td>  159</td>\n",
        "      <td>  158</td>\n",
        "      <td>  592</td>\n",
        "      <td>  624</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>20</th>\n",
        "      <td>          Cd34</td>\n",
        "      <td> in</td>\n",
        "      <td>  chr1:196785424-196786129:+</td>\n",
        "      <td>            Cd34_(155)</td>\n",
        "      <td>        alt_3 </td>\n",
        "      <td>            Cd34_(155)_include</td>\n",
        "      <td>-0.059</td>\n",
        "      <td> 0.456</td>\n",
        "      <td>  151</td>\n",
        "      <td>  148</td>\n",
        "      <td>  401</td>\n",
        "      <td>  394</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>21</th>\n",
        "      <td>         Ilvbl</td>\n",
        "      <td> sk</td>\n",
        "      <td>   chr10:78046446-78046622:+</td>\n",
        "      <td>           Ilvbl_(174)</td>\n",
        "      <td> retained_int </td>\n",
        "      <td>              Ilvbl_(174)_skip</td>\n",
        "      <td>-0.330</td>\n",
        "      <td> 0.530</td>\n",
        "      <td>   53</td>\n",
        "      <td>   50</td>\n",
        "      <td>  505</td>\n",
        "      <td>  455</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>22</th>\n",
        "      <td>         Ywhae</td>\n",
        "      <td> in</td>\n",
        "      <td>   chr11:75546573-75565502:+</td>\n",
        "      <td>            Ywhae_(98)</td>\n",
        "      <td>        alt_3 </td>\n",
        "      <td>            Ywhae_(98)_include</td>\n",
        "      <td> 0.048</td>\n",
        "      <td> 0.394</td>\n",
        "      <td>  286</td>\n",
        "      <td>  293</td>\n",
        "      <td> 1790</td>\n",
        "      <td> 1931</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>23</th>\n",
        "      <td>          Lipg</td>\n",
        "      <td> sk</td>\n",
        "      <td>   chr18:75099020-75105457:-</td>\n",
        "      <td>         Lipg_1_s15e21</td>\n",
        "      <td>      alt_end </td>\n",
        "      <td>            Lipg_1_s15e21_skip</td>\n",
        "      <td>-0.250</td>\n",
        "      <td> 0.286</td>\n",
        "      <td>  202</td>\n",
        "      <td>  229</td>\n",
        "      <td>   78</td>\n",
        "      <td>   94</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>24</th>\n",
        "      <td>          Pkd2</td>\n",
        "      <td> in</td>\n",
        "      <td>  chr5:104923913-104934815:+</td>\n",
        "      <td>          Pkd2_1_s0e33</td>\n",
        "      <td>      complex </td>\n",
        "      <td>          Pkd2_1_s0e33_include</td>\n",
        "      <td>-0.102</td>\n",
        "      <td> 0.457</td>\n",
        "      <td>  222</td>\n",
        "      <td>  225</td>\n",
        "      <td>  189</td>\n",
        "      <td>  189</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>25</th>\n",
        "      <td>        Zfp444</td>\n",
        "      <td> in</td>\n",
        "      <td>      chr7:6125703-6135463:+</td>\n",
        "      <td>           Zfp444_(71)</td>\n",
        "      <td>        alt_3 </td>\n",
        "      <td>           Zfp444_(71)_include</td>\n",
        "      <td> 0.420</td>\n",
        "      <td> 0.000</td>\n",
        "      <td>   59</td>\n",
        "      <td>   51</td>\n",
        "      <td>  260</td>\n",
        "      <td>  289</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>26</th>\n",
        "      <td>      Ppp1r12a</td>\n",
        "      <td> sk</td>\n",
        "      <td> chr10:107688980-107690401:+</td>\n",
        "      <td>     Ppp1r12a_1_s23e25</td>\n",
        "      <td>      complex </td>\n",
        "      <td>        Ppp1r12a_1_s23e25_skip</td>\n",
        "      <td> 0.078</td>\n",
        "      <td> 0.439</td>\n",
        "      <td>  422</td>\n",
        "      <td>  397</td>\n",
        "      <td>   33</td>\n",
        "      <td>   31</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>27</th>\n",
        "      <td>      Tmem132d</td>\n",
        "      <td> sk</td>\n",
        "      <td>  chr5:128263862-128938924:-</td>\n",
        "      <td>      Tmem132d_1_s0e20</td>\n",
        "      <td>      complex </td>\n",
        "      <td>         Tmem132d_1_s0e20_skip</td>\n",
        "      <td> 0.089</td>\n",
        "      <td> 0.536</td>\n",
        "      <td>  282</td>\n",
        "      <td>  261</td>\n",
        "      <td>  761</td>\n",
        "      <td>  724</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>28</th>\n",
        "      <td>          Rnf4</td>\n",
        "      <td> in</td>\n",
        "      <td>    chr5:34679133-34685170:+</td>\n",
        "      <td>             Rnf4_(56)</td>\n",
        "      <td>        alt_5 </td>\n",
        "      <td>             Rnf4_(56)_include</td>\n",
        "      <td> 0.067</td>\n",
        "      <td> 0.603</td>\n",
        "      <td>  360</td>\n",
        "      <td>  366</td>\n",
        "      <td>  312</td>\n",
        "      <td>  305</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>29</th>\n",
        "      <td>         Pcgf3</td>\n",
        "      <td> in</td>\n",
        "      <td>  chr5:108916923-108931679:+</td>\n",
        "      <td>        Pcgf3_1_s15e23</td>\n",
        "      <td>      alt_end </td>\n",
        "      <td>        Pcgf3_1_s15e23_include</td>\n",
        "      <td>-0.014</td>\n",
        "      <td> 0.408</td>\n",
        "      <td>  490</td>\n",
        "      <td>  510</td>\n",
        "      <td>  110</td>\n",
        "      <td>  113</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>30</th>\n",
        "      <td>        Ndufa6</td>\n",
        "      <td> in</td>\n",
        "      <td>   chr15:82180781-82184531:-</td>\n",
        "      <td>          Ndufa6_(116)</td>\n",
        "      <td> alt_cassette </td>\n",
        "      <td>          Ndufa6_(116)_include</td>\n",
        "      <td>-0.164</td>\n",
        "      <td> 0.427</td>\n",
        "      <td>  145</td>\n",
        "      <td>  144</td>\n",
        "      <td> 1521</td>\n",
        "      <td> 1470</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>31</th>\n",
        "      <td>          Gas2</td>\n",
        "      <td> sk</td>\n",
        "      <td>    chr7:59117384-59143281:+</td>\n",
        "      <td>           Gas2_1_s0e8</td>\n",
        "      <td>    alt_start </td>\n",
        "      <td>              Gas2_1_s0e8_skip</td>\n",
        "      <td>-0.001</td>\n",
        "      <td> 0.628</td>\n",
        "      <td>  177</td>\n",
        "      <td>  180</td>\n",
        "      <td>  119</td>\n",
        "      <td>  115</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>32</th>\n",
        "      <td>        C85492</td>\n",
        "      <td> sk</td>\n",
        "      <td>  chr9:121890745-121892933:-</td>\n",
        "      <td>        C85492_1_s0e10</td>\n",
        "      <td>      complex </td>\n",
        "      <td>           C85492_1_s0e10_skip</td>\n",
        "      <td> 0.056</td>\n",
        "      <td> 0.047</td>\n",
        "      <td>  298</td>\n",
        "      <td>  306</td>\n",
        "      <td>  530</td>\n",
        "      <td>  499</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>33</th>\n",
        "      <td>         Traf7</td>\n",
        "      <td> sk</td>\n",
        "      <td>   chr17:24651774-24653449:-</td>\n",
        "      <td>            Traf7_(36)</td>\n",
        "      <td>        alt_3 </td>\n",
        "      <td>               Traf7_(36)_skip</td>\n",
        "      <td>-0.189</td>\n",
        "      <td> 0.452</td>\n",
        "      <td>   68</td>\n",
        "      <td>   67</td>\n",
        "      <td>  137</td>\n",
        "      <td>  130</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>34</th>\n",
        "      <td>         Arvcf</td>\n",
        "      <td> in</td>\n",
        "      <td>   chr16:18404638-18405699:+</td>\n",
        "      <td>           Arvcf_(120)</td>\n",
        "      <td> alt_cassette </td>\n",
        "      <td>           Arvcf_(120)_include</td>\n",
        "      <td> 0.145</td>\n",
        "      <td> 0.052</td>\n",
        "      <td>  192</td>\n",
        "      <td>  178</td>\n",
        "      <td>  168</td>\n",
        "      <td>  171</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>35</th>\n",
        "      <td>        Pdxdc1</td>\n",
        "      <td> sk</td>\n",
        "      <td>   chr16:13834939-13837135:-</td>\n",
        "      <td>          Pdxdc1_(230)</td>\n",
        "      <td> alt_cassette </td>\n",
        "      <td>             Pdxdc1_(230)_skip</td>\n",
        "      <td>-0.191</td>\n",
        "      <td> 0.000</td>\n",
        "      <td>  213</td>\n",
        "      <td>  171</td>\n",
        "      <td>  438</td>\n",
        "      <td>  418</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>36</th>\n",
        "      <td> 4922501C03Rik</td>\n",
        "      <td> in</td>\n",
        "      <td>    chr9:87098556-87150367:-</td>\n",
        "      <td> 4922501C03Rik_1_s0e54</td>\n",
        "      <td>      complex </td>\n",
        "      <td> 4922501C03Rik_1_s0e54_include</td>\n",
        "      <td> 0.083</td>\n",
        "      <td> 0.304</td>\n",
        "      <td>  123</td>\n",
        "      <td>  120</td>\n",
        "      <td>  166</td>\n",
        "      <td>  166</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>37</th>\n",
        "      <td>         Ap2m1</td>\n",
        "      <td> sk</td>\n",
        "      <td>   chr16:20535654-20539401:+</td>\n",
        "      <td>           Ap2m1_(117)</td>\n",
        "      <td> alt_cassette </td>\n",
        "      <td>              Ap2m1_(117)_skip</td>\n",
        "      <td>-0.063</td>\n",
        "      <td> 0.560</td>\n",
        "      <td>  158</td>\n",
        "      <td>  158</td>\n",
        "      <td> 1046</td>\n",
        "      <td> 1024</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>38</th>\n",
        "      <td> 1700019E19Rik</td>\n",
        "      <td> in</td>\n",
        "      <td>   chr12:87452625-87481001:+</td>\n",
        "      <td>    1700019E19Rik_(33)</td>\n",
        "      <td> alt_cassette </td>\n",
        "      <td>    1700019E19Rik_(33)_include</td>\n",
        "      <td> 0.010</td>\n",
        "      <td> 0.419</td>\n",
        "      <td>  255</td>\n",
        "      <td>  245</td>\n",
        "      <td>  313</td>\n",
        "      <td>  305</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>39</th>\n",
        "      <td>       Slc38a1</td>\n",
        "      <td> n1</td>\n",
        "      <td>   chr15:96454600-96473344:-</td>\n",
        "      <td>        Slc38a1_1_s0e7</td>\n",
        "      <td>     Ncomplex </td>\n",
        "      <td>             Slc38a1_1_s0e7_n1</td>\n",
        "      <td> 0.014</td>\n",
        "      <td> 0.593</td>\n",
        "      <td> 1053</td>\n",
        "      <td> 1045</td>\n",
        "      <td> 1178</td>\n",
        "      <td> 1201</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>40</th>\n",
        "      <td>           Osm</td>\n",
        "      <td> sk</td>\n",
        "      <td>     chr11:4136896-4139409:+</td>\n",
        "      <td>             Osm_(137)</td>\n",
        "      <td> alt_cassette </td>\n",
        "      <td>                Osm_(137)_skip</td>\n",
        "      <td> 0.099</td>\n",
        "      <td> 0.164</td>\n",
        "      <td>   79</td>\n",
        "      <td>   99</td>\n",
        "      <td>   64</td>\n",
        "      <td>   70</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>41</th>\n",
        "      <td>         Calb2</td>\n",
        "      <td> sk</td>\n",
        "      <td>  chr8:112666512-112692106:-</td>\n",
        "      <td>         Calb2_1_s0e10</td>\n",
        "      <td>      complex </td>\n",
        "      <td>            Calb2_1_s0e10_skip</td>\n",
        "      <td> 0.092</td>\n",
        "      <td> 0.546</td>\n",
        "      <td>  734</td>\n",
        "      <td>  681</td>\n",
        "      <td>  901</td>\n",
        "      <td>  821</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>42</th>\n",
        "      <td>         Ttc14</td>\n",
        "      <td> in</td>\n",
        "      <td>    chr3:33699358-33699877:+</td>\n",
        "      <td>           Ttc14_(237)</td>\n",
        "      <td>        alt_5 </td>\n",
        "      <td>           Ttc14_(237)_include</td>\n",
        "      <td> 0.042</td>\n",
        "      <td> 0.523</td>\n",
        "      <td>  631</td>\n",
        "      <td>  602</td>\n",
        "      <td>  169</td>\n",
        "      <td>  160</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>43</th>\n",
        "      <td>        Adarb2</td>\n",
        "      <td> in</td>\n",
        "      <td>     chr13:8756821-8766626:+</td>\n",
        "      <td>       Adarb2_2_s20e24</td>\n",
        "      <td>      alt_end </td>\n",
        "      <td>       Adarb2_2_s20e24_include</td>\n",
        "      <td> 0.017</td>\n",
        "      <td> 0.341</td>\n",
        "      <td> 1820</td>\n",
        "      <td> 1713</td>\n",
        "      <td>  143</td>\n",
        "      <td>  142</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>44</th>\n",
        "      <td>      Atp6v0a1</td>\n",
        "      <td> in</td>\n",
        "      <td> chr11:100905937-100909839:+</td>\n",
        "      <td>     Atp6v0a1_3_s35e38</td>\n",
        "      <td>      alt_end </td>\n",
        "      <td>     Atp6v0a1_3_s35e38_include</td>\n",
        "      <td> 0.010</td>\n",
        "      <td> 0.613</td>\n",
        "      <td> 2202</td>\n",
        "      <td> 2274</td>\n",
        "      <td>  252</td>\n",
        "      <td>  257</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>45</th>\n",
        "      <td>        Parp16</td>\n",
        "      <td> sk</td>\n",
        "      <td>    chr9:65062527-65063155:+</td>\n",
        "      <td>         Parp16_1_s0e4</td>\n",
        "      <td>    alt_start </td>\n",
        "      <td>            Parp16_1_s0e4_skip</td>\n",
        "      <td>-0.221</td>\n",
        "      <td> 0.509</td>\n",
        "      <td>   97</td>\n",
        "      <td>   91</td>\n",
        "      <td>   63</td>\n",
        "      <td>   61</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>46</th>\n",
        "      <td>        Scara5</td>\n",
        "      <td> in</td>\n",
        "      <td>   chr14:66360996-66383253:+</td>\n",
        "      <td>       Scara5_1_s13e20</td>\n",
        "      <td>      alt_end </td>\n",
        "      <td>       Scara5_1_s13e20_include</td>\n",
        "      <td>-0.306</td>\n",
        "      <td> 0.420</td>\n",
        "      <td>  197</td>\n",
        "      <td>  206</td>\n",
        "      <td>   54</td>\n",
        "      <td>   53</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>47</th>\n",
        "      <td>         Osbp2</td>\n",
        "      <td> in</td>\n",
        "      <td>     chr11:3617989-3626578:-</td>\n",
        "      <td>         Osbp2_1_s0e12</td>\n",
        "      <td>    alt_start </td>\n",
        "      <td>         Osbp2_1_s0e12_include</td>\n",
        "      <td> 0.008</td>\n",
        "      <td> 0.612</td>\n",
        "      <td>  144</td>\n",
        "      <td>  150</td>\n",
        "      <td>  866</td>\n",
        "      <td>  873</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>48</th>\n",
        "      <td>       Ciapin1</td>\n",
        "      <td> sk</td>\n",
        "      <td>    chr8:97355825-97356448:-</td>\n",
        "      <td>          Ciapin1_(33)</td>\n",
        "      <td>        alt_5 </td>\n",
        "      <td>             Ciapin1_(33)_skip</td>\n",
        "      <td>-0.056</td>\n",
        "      <td> 0.648</td>\n",
        "      <td>   78</td>\n",
        "      <td>   85</td>\n",
        "      <td>  312</td>\n",
        "      <td>  317</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>49</th>\n",
        "      <td>          Nrg1</td>\n",
        "      <td> in</td>\n",
        "      <td>    chr8:32959911-33060439:-</td>\n",
        "      <td>          Nrg1_1_s0e14</td>\n",
        "      <td>    alt_start </td>\n",
        "      <td>          Nrg1_1_s0e14_include</td>\n",
        "      <td>-0.250</td>\n",
        "      <td> 0.000</td>\n",
        "      <td>  465</td>\n",
        "      <td>  485</td>\n",
        "      <td>   87</td>\n",
        "      <td>   78</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>50</th>\n",
        "      <td>          Mzf1</td>\n",
        "      <td> sk</td>\n",
        "      <td>    chr7:13638530-13640014:-</td>\n",
        "      <td>           Mzf1_1_s0e4</td>\n",
        "      <td>    alt_start </td>\n",
        "      <td>              Mzf1_1_s0e4_skip</td>\n",
        "      <td> 0.072</td>\n",
        "      <td> 0.217</td>\n",
        "      <td>  112</td>\n",
        "      <td>  122</td>\n",
        "      <td>  202</td>\n",
        "      <td>  195</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>51</th>\n",
        "      <td>         Park7</td>\n",
        "      <td> sk</td>\n",
        "      <td>  chr4:150281230-150283912:-</td>\n",
        "      <td>           Park7_(106)</td>\n",
        "      <td> alt_cassette </td>\n",
        "      <td>              Park7_(106)_skip</td>\n",
        "      <td>-0.241</td>\n",
        "      <td> 0.469</td>\n",
        "      <td>   75</td>\n",
        "      <td>   73</td>\n",
        "      <td> 1542</td>\n",
        "      <td> 1490</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>52</th>\n",
        "      <td>       Ankrd42</td>\n",
        "      <td> in</td>\n",
        "      <td>    chr7:99732975-99759054:-</td>\n",
        "      <td>      Ankrd42_2_s16e25</td>\n",
        "      <td>      alt_end </td>\n",
        "      <td>      Ankrd42_2_s16e25_include</td>\n",
        "      <td> 0.237</td>\n",
        "      <td> 0.341</td>\n",
        "      <td>  124</td>\n",
        "      <td>  114</td>\n",
        "      <td>   60</td>\n",
        "      <td>   60</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>53</th>\n",
        "      <td>         Pcyt2</td>\n",
        "      <td> sk</td>\n",
        "      <td> chr11:120473915-120474692:-</td>\n",
        "      <td>            Pcyt2_(54)</td>\n",
        "      <td> alt_cassette </td>\n",
        "      <td>               Pcyt2_(54)_skip</td>\n",
        "      <td> 0.302</td>\n",
        "      <td> 0.068</td>\n",
        "      <td>   96</td>\n",
        "      <td>  115</td>\n",
        "      <td>  188</td>\n",
        "      <td>  182</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>54</th>\n",
        "      <td>          Psd4</td>\n",
        "      <td> n1</td>\n",
        "      <td>    chr2:24223194-24249541:+</td>\n",
        "      <td>           Psd4_1_s0e9</td>\n",
        "      <td>     Ncomplex </td>\n",
        "      <td>                Psd4_1_s0e9_n1</td>\n",
        "      <td> 0.035</td>\n",
        "      <td> 0.292</td>\n",
        "      <td>   73</td>\n",
        "      <td>   78</td>\n",
        "      <td>   78</td>\n",
        "      <td>   81</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>55</th>\n",
        "      <td>         Dock1</td>\n",
        "      <td> in</td>\n",
        "      <td>  chr7:142067978-142365094:+</td>\n",
        "      <td>       Dock1_2_s58e110</td>\n",
        "      <td>      alt_end </td>\n",
        "      <td>       Dock1_2_s58e110_include</td>\n",
        "      <td> 0.165</td>\n",
        "      <td> 0.145</td>\n",
        "      <td>  242</td>\n",
        "      <td>  221</td>\n",
        "      <td>  167</td>\n",
        "      <td>  173</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>56</th>\n",
        "      <td>       Cdc37l1</td>\n",
        "      <td> in</td>\n",
        "      <td>   chr19:29086543-29087277:+</td>\n",
        "      <td>         Cdc37l1_(732)</td>\n",
        "      <td> retained_int </td>\n",
        "      <td>         Cdc37l1_(732)_include</td>\n",
        "      <td> 0.183</td>\n",
        "      <td> 0.236</td>\n",
        "      <td>  601</td>\n",
        "      <td>  571</td>\n",
        "      <td>  267</td>\n",
        "      <td>  283</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>57</th>\n",
        "      <td>        Tom1l2</td>\n",
        "      <td> sk</td>\n",
        "      <td>   chr11:60040215-60055319:-</td>\n",
        "      <td>       Tom1l2_1_s23e33</td>\n",
        "      <td>      alt_end </td>\n",
        "      <td>          Tom1l2_1_s23e33_skip</td>\n",
        "      <td> 0.016</td>\n",
        "      <td> 0.338</td>\n",
        "      <td>  196</td>\n",
        "      <td>  194</td>\n",
        "      <td>  802</td>\n",
        "      <td>  773</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>58</th>\n",
        "      <td>        Atf7ip</td>\n",
        "      <td> in</td>\n",
        "      <td>  chr6:136467484-136508284:+</td>\n",
        "      <td>          Atf7ip_(123)</td>\n",
        "      <td> alt_cassette </td>\n",
        "      <td>          Atf7ip_(123)_include</td>\n",
        "      <td> 0.166</td>\n",
        "      <td> 0.348</td>\n",
        "      <td>   63</td>\n",
        "      <td>   54</td>\n",
        "      <td>  104</td>\n",
        "      <td>   98</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>59</th>\n",
        "      <td>          Snrk</td>\n",
        "      <td> sk</td>\n",
        "      <td>  chr9:122026525-122046023:+</td>\n",
        "      <td>             Snrk_(50)</td>\n",
        "      <td> alt_cassette </td>\n",
        "      <td>                Snrk_(50)_skip</td>\n",
        "      <td> 0.205</td>\n",
        "      <td> 0.505</td>\n",
        "      <td>  104</td>\n",
        "      <td>  100</td>\n",
        "      <td>  496</td>\n",
        "      <td>  487</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th></th>\n",
        "      <td>...</td>\n",
        "      <td>...</td>\n",
        "      <td>...</td>\n",
        "      <td>...</td>\n",
        "      <td>...</td>\n",
        "      <td>...</td>\n",
        "      <td>...</td>\n",
        "      <td>...</td>\n",
        "      <td>...</td>\n",
        "      <td>...</td>\n",
        "      <td>...</td>\n",
        "      <td>...</td>\n",
        "    </tr>\n",
        "  </tbody>\n",
        "</table>\n",
        "<p>22639 rows \u00d7 12 columns</p>\n",
        "</div>"
       ],
       "metadata": {},
       "output_type": "pyout",
       "prompt_number": 18,
       "text": [
        "             Gene path               event position             event name  \\\n",
        "0            Ktn1   in    chr14:48323952-48325437:+              Ktn1_(69)   \n",
        "1            Gas5   in   chr1:162966375-162966679:+             Gas5_(302)   \n",
        "2          Agpat9   sk   chr5:101275247-101275490:+          Agpat9_1_s0e4   \n",
        "3            Mpp5   in    chr12:79849897-79895231:+            Mpp5_1_s0e5   \n",
        "4           Acot8   in   chr2:164618510-164620581:-             Acot8_(96)   \n",
        "5             H13   in   chr2:152526004-152530357:+              H13_(200)   \n",
        "6     D16Ertd472e   sk    chr16:78576299-78576703:-       D16Ertd472e_(34)   \n",
        "7         Col25a1   sk   chr3:130220655-130225350:+          Col25a1_(27a)   \n",
        "8          Ppfia2   sk  chr10:106364898-106368199:+            Ppfia2_(92)   \n",
        "9          Mapk14   sk    chr17:28828389-28850718:+          Mapk14_1_s0e5   \n",
        "10  4922505G16Rik   sk   chr2:157034285-157090808:-  4922505G16Rik_1_s7e51   \n",
        "11  2700078K21Rik   in   chr7:149202077-149202298:-     2700078K21Rik_(48)   \n",
        "12           Hbp1   sk    chr12:32615546-32621836:-          Hbp1_1_s11e18   \n",
        "13  2210009G21Rik   n2   chr2:136716953-136731278:+   2210009G21Rik_1_s0e9   \n",
        "14        Pacsin3   sk     chr2:91096321-91100327:+        Pacsin3_1_s0e10   \n",
        "15  2410042D21Rik   sk   chr2:112246490-112254236:+  2410042D21Rik_1_s7e21   \n",
        "16           Ldb3   sk    chr14:35339884-35380042:-          Ldb3_3_s19e36   \n",
        "17         Dixdc1   in     chr9:50514355-50518947:-            Dixdc1_(77)   \n",
        "18           Etv1   sk    chr12:39506896-39519757:+           Etv1_1_s0e11   \n",
        "19           Dmwd   in     chr7:19661548-19663403:+            Dmwd_1_s0e4   \n",
        "20           Cd34   in   chr1:196785424-196786129:+             Cd34_(155)   \n",
        "21          Ilvbl   sk    chr10:78046446-78046622:+            Ilvbl_(174)   \n",
        "22          Ywhae   in    chr11:75546573-75565502:+             Ywhae_(98)   \n",
        "23           Lipg   sk    chr18:75099020-75105457:-          Lipg_1_s15e21   \n",
        "24           Pkd2   in   chr5:104923913-104934815:+           Pkd2_1_s0e33   \n",
        "25         Zfp444   in       chr7:6125703-6135463:+            Zfp444_(71)   \n",
        "26       Ppp1r12a   sk  chr10:107688980-107690401:+      Ppp1r12a_1_s23e25   \n",
        "27       Tmem132d   sk   chr5:128263862-128938924:-       Tmem132d_1_s0e20   \n",
        "28           Rnf4   in     chr5:34679133-34685170:+              Rnf4_(56)   \n",
        "29          Pcgf3   in   chr5:108916923-108931679:+         Pcgf3_1_s15e23   \n",
        "30         Ndufa6   in    chr15:82180781-82184531:-           Ndufa6_(116)   \n",
        "31           Gas2   sk     chr7:59117384-59143281:+            Gas2_1_s0e8   \n",
        "32         C85492   sk   chr9:121890745-121892933:-         C85492_1_s0e10   \n",
        "33          Traf7   sk    chr17:24651774-24653449:-             Traf7_(36)   \n",
        "34          Arvcf   in    chr16:18404638-18405699:+            Arvcf_(120)   \n",
        "35         Pdxdc1   sk    chr16:13834939-13837135:-           Pdxdc1_(230)   \n",
        "36  4922501C03Rik   in     chr9:87098556-87150367:-  4922501C03Rik_1_s0e54   \n",
        "37          Ap2m1   sk    chr16:20535654-20539401:+            Ap2m1_(117)   \n",
        "38  1700019E19Rik   in    chr12:87452625-87481001:+     1700019E19Rik_(33)   \n",
        "39        Slc38a1   n1    chr15:96454600-96473344:-         Slc38a1_1_s0e7   \n",
        "40            Osm   sk      chr11:4136896-4139409:+              Osm_(137)   \n",
        "41          Calb2   sk   chr8:112666512-112692106:-          Calb2_1_s0e10   \n",
        "42          Ttc14   in     chr3:33699358-33699877:+            Ttc14_(237)   \n",
        "43         Adarb2   in      chr13:8756821-8766626:+        Adarb2_2_s20e24   \n",
        "44       Atp6v0a1   in  chr11:100905937-100909839:+      Atp6v0a1_3_s35e38   \n",
        "45         Parp16   sk     chr9:65062527-65063155:+          Parp16_1_s0e4   \n",
        "46         Scara5   in    chr14:66360996-66383253:+        Scara5_1_s13e20   \n",
        "47          Osbp2   in      chr11:3617989-3626578:-          Osbp2_1_s0e12   \n",
        "48        Ciapin1   sk     chr8:97355825-97356448:-           Ciapin1_(33)   \n",
        "49           Nrg1   in     chr8:32959911-33060439:-           Nrg1_1_s0e14   \n",
        "50           Mzf1   sk     chr7:13638530-13640014:-            Mzf1_1_s0e4   \n",
        "51          Park7   sk   chr4:150281230-150283912:-            Park7_(106)   \n",
        "52        Ankrd42   in     chr7:99732975-99759054:-       Ankrd42_2_s16e25   \n",
        "53          Pcyt2   sk  chr11:120473915-120474692:-             Pcyt2_(54)   \n",
        "54           Psd4   n1     chr2:24223194-24249541:+            Psd4_1_s0e9   \n",
        "55          Dock1   in   chr7:142067978-142365094:+        Dock1_2_s58e110   \n",
        "56        Cdc37l1   in    chr19:29086543-29087277:+          Cdc37l1_(732)   \n",
        "57         Tom1l2   sk    chr11:60040215-60055319:-        Tom1l2_1_s23e33   \n",
        "58         Atf7ip   in   chr6:136467484-136508284:+           Atf7ip_(123)   \n",
        "59           Snrk   sk   chr9:122026525-122046023:+              Snrk_(50)   \n",
        "              ...  ...                          ...                    ...   \n",
        "\n",
        "            notes mjay_sepscore_yeo_july14_BrD_BrB  \\\n",
        "0   alt_cassette                 Ktn1_(69)_include   \n",
        "1   retained_int                Gas5_(302)_include   \n",
        "2      alt_start                Agpat9_1_s0e4_skip   \n",
        "3      alt_start               Mpp5_1_s0e5_include   \n",
        "4          alt_5                Acot8_(96)_include   \n",
        "5   alt_cassette                 H13_(200)_include   \n",
        "6        complex             D16Ertd472e_(34)_skip   \n",
        "7   alt_cassette                Col25a1_(27a)_skip   \n",
        "8   alt_cassette                  Ppfia2_(92)_skip   \n",
        "9      alt_start                Mapk14_1_s0e5_skip   \n",
        "10       alt_end        4922505G16Rik_1_s7e51_skip   \n",
        "11       complex        2700078K21Rik_(48)_include   \n",
        "12       alt_end                Hbp1_1_s11e18_skip   \n",
        "13      Ncomplex           2210009G21Rik_1_s0e9_n2   \n",
        "14     alt_start              Pacsin3_1_s0e10_skip   \n",
        "15       alt_end        2410042D21Rik_1_s7e21_skip   \n",
        "16       alt_end                Ldb3_3_s19e36_skip   \n",
        "17       complex               Dixdc1_(77)_include   \n",
        "18     alt_start                 Etv1_1_s0e11_skip   \n",
        "19     alt_start               Dmwd_1_s0e4_include   \n",
        "20         alt_3                Cd34_(155)_include   \n",
        "21  retained_int                  Ilvbl_(174)_skip   \n",
        "22         alt_3                Ywhae_(98)_include   \n",
        "23       alt_end                Lipg_1_s15e21_skip   \n",
        "24       complex              Pkd2_1_s0e33_include   \n",
        "25         alt_3               Zfp444_(71)_include   \n",
        "26       complex            Ppp1r12a_1_s23e25_skip   \n",
        "27       complex             Tmem132d_1_s0e20_skip   \n",
        "28         alt_5                 Rnf4_(56)_include   \n",
        "29       alt_end            Pcgf3_1_s15e23_include   \n",
        "30  alt_cassette              Ndufa6_(116)_include   \n",
        "31     alt_start                  Gas2_1_s0e8_skip   \n",
        "32       complex               C85492_1_s0e10_skip   \n",
        "33         alt_3                   Traf7_(36)_skip   \n",
        "34  alt_cassette               Arvcf_(120)_include   \n",
        "35  alt_cassette                 Pdxdc1_(230)_skip   \n",
        "36       complex     4922501C03Rik_1_s0e54_include   \n",
        "37  alt_cassette                  Ap2m1_(117)_skip   \n",
        "38  alt_cassette        1700019E19Rik_(33)_include   \n",
        "39      Ncomplex                 Slc38a1_1_s0e7_n1   \n",
        "40  alt_cassette                    Osm_(137)_skip   \n",
        "41       complex                Calb2_1_s0e10_skip   \n",
        "42         alt_5               Ttc14_(237)_include   \n",
        "43       alt_end           Adarb2_2_s20e24_include   \n",
        "44       alt_end         Atp6v0a1_3_s35e38_include   \n",
        "45     alt_start                Parp16_1_s0e4_skip   \n",
        "46       alt_end           Scara5_1_s13e20_include   \n",
        "47     alt_start             Osbp2_1_s0e12_include   \n",
        "48         alt_5                 Ciapin1_(33)_skip   \n",
        "49     alt_start              Nrg1_1_s0e14_include   \n",
        "50     alt_start                  Mzf1_1_s0e4_skip   \n",
        "51  alt_cassette                  Park7_(106)_skip   \n",
        "52       alt_end          Ankrd42_2_s16e25_include   \n",
        "53  alt_cassette                   Pcyt2_(54)_skip   \n",
        "54      Ncomplex                    Psd4_1_s0e9_n1   \n",
        "55       alt_end           Dock1_2_s58e110_include   \n",
        "56  retained_int             Cdc37l1_(732)_include   \n",
        "57       alt_end              Tom1l2_1_s23e33_skip   \n",
        "58  alt_cassette              Atf7ip_(123)_include   \n",
        "59  alt_cassette                    Snrk_(50)_skip   \n",
        "              ...                              ...   \n",
        "\n",
        "    mjay_sepscore_yeo_july14_BrD_BrB_sepscore  \\\n",
        "0                                      -0.171   \n",
        "1                                      -0.037   \n",
        "2                                       0.151   \n",
        "3                                      -0.017   \n",
        "4                                      -0.035   \n",
        "5                                      -0.186   \n",
        "6                                      -0.487   \n",
        "7                                      -0.323   \n",
        "8                                      -0.117   \n",
        "9                                      -0.211   \n",
        "10                                     -0.098   \n",
        "11                                     -0.049   \n",
        "12                                      0.011   \n",
        "13                                     -0.126   \n",
        "14                                     -0.025   \n",
        "15                                      0.271   \n",
        "16                                      0.099   \n",
        "17                                      0.029   \n",
        "18                                     -0.085   \n",
        "19                                      0.209   \n",
        "20                                     -0.059   \n",
        "21                                     -0.330   \n",
        "22                                      0.048   \n",
        "23                                     -0.250   \n",
        "24                                     -0.102   \n",
        "25                                      0.420   \n",
        "26                                      0.078   \n",
        "27                                      0.089   \n",
        "28                                      0.067   \n",
        "29                                     -0.014   \n",
        "30                                     -0.164   \n",
        "31                                     -0.001   \n",
        "32                                      0.056   \n",
        "33                                     -0.189   \n",
        "34                                      0.145   \n",
        "35                                     -0.191   \n",
        "36                                      0.083   \n",
        "37                                     -0.063   \n",
        "38                                      0.010   \n",
        "39                                      0.014   \n",
        "40                                      0.099   \n",
        "41                                      0.092   \n",
        "42                                      0.042   \n",
        "43                                      0.017   \n",
        "44                                      0.010   \n",
        "45                                     -0.221   \n",
        "46                                     -0.306   \n",
        "47                                      0.008   \n",
        "48                                     -0.056   \n",
        "49                                     -0.250   \n",
        "50                                      0.072   \n",
        "51                                     -0.241   \n",
        "52                                      0.237   \n",
        "53                                      0.302   \n",
        "54                                      0.035   \n",
        "55                                      0.165   \n",
        "56                                      0.183   \n",
        "57                                      0.016   \n",
        "58                                      0.166   \n",
        "59                                      0.205   \n",
        "                                          ...   \n",
        "\n",
        "    mjay_sepscore_yeo_july14_BrD_BrB_q-value  \\\n",
        "0                                      0.374   \n",
        "1                                      0.321   \n",
        "2                                      0.247   \n",
        "3                                      0.419   \n",
        "4                                      0.196   \n",
        "5                                      0.125   \n",
        "6                                      0.333   \n",
        "7                                      0.125   \n",
        "8                                      0.201   \n",
        "9                                      0.505   \n",
        "10                                     0.370   \n",
        "11                                     0.392   \n",
        "12                                     0.546   \n",
        "13                                     0.242   \n",
        "14                                     0.122   \n",
        "15                                     0.401   \n",
        "16                                     0.044   \n",
        "17                                     0.275   \n",
        "18                                     0.045   \n",
        "19                                     0.251   \n",
        "20                                     0.456   \n",
        "21                                     0.530   \n",
        "22                                     0.394   \n",
        "23                                     0.286   \n",
        "24                                     0.457   \n",
        "25                                     0.000   \n",
        "26                                     0.439   \n",
        "27                                     0.536   \n",
        "28                                     0.603   \n",
        "29                                     0.408   \n",
        "30                                     0.427   \n",
        "31                                     0.628   \n",
        "32                                     0.047   \n",
        "33                                     0.452   \n",
        "34                                     0.052   \n",
        "35                                     0.000   \n",
        "36                                     0.304   \n",
        "37                                     0.560   \n",
        "38                                     0.419   \n",
        "39                                     0.593   \n",
        "40                                     0.164   \n",
        "41                                     0.546   \n",
        "42                                     0.523   \n",
        "43                                     0.341   \n",
        "44                                     0.613   \n",
        "45                                     0.509   \n",
        "46                                     0.420   \n",
        "47                                     0.612   \n",
        "48                                     0.648   \n",
        "49                                     0.000   \n",
        "50                                     0.217   \n",
        "51                                     0.469   \n",
        "52                                     0.341   \n",
        "53                                     0.068   \n",
        "54                                     0.292   \n",
        "55                                     0.145   \n",
        "56                                     0.236   \n",
        "57                                     0.338   \n",
        "58                                     0.348   \n",
        "59                                     0.505   \n",
        "                                         ...   \n",
        "\n",
        "    mjay_sepscore_yeo_july14_BrD_BrB_skipA  \\\n",
        "0                                      127   \n",
        "1                                      287   \n",
        "2                                       88   \n",
        "3                                      226   \n",
        "4                                       55   \n",
        "5                                      104   \n",
        "6                                       66   \n",
        "7                                      103   \n",
        "8                                       60   \n",
        "9                                      221   \n",
        "10                                     119   \n",
        "11                                      48   \n",
        "12                                     211   \n",
        "13                                     138   \n",
        "14                                     320   \n",
        "15                                     129   \n",
        "16                                     116   \n",
        "17                                      65   \n",
        "18                                     750   \n",
        "19                                     159   \n",
        "20                                     151   \n",
        "21                                      53   \n",
        "22                                     286   \n",
        "23                                     202   \n",
        "24                                     222   \n",
        "25                                      59   \n",
        "26                                     422   \n",
        "27                                     282   \n",
        "28                                     360   \n",
        "29                                     490   \n",
        "30                                     145   \n",
        "31                                     177   \n",
        "32                                     298   \n",
        "33                                      68   \n",
        "34                                     192   \n",
        "35                                     213   \n",
        "36                                     123   \n",
        "37                                     158   \n",
        "38                                     255   \n",
        "39                                    1053   \n",
        "40                                      79   \n",
        "41                                     734   \n",
        "42                                     631   \n",
        "43                                    1820   \n",
        "44                                    2202   \n",
        "45                                      97   \n",
        "46                                     197   \n",
        "47                                     144   \n",
        "48                                      78   \n",
        "49                                     465   \n",
        "50                                     112   \n",
        "51                                      75   \n",
        "52                                     124   \n",
        "53                                      96   \n",
        "54                                      73   \n",
        "55                                     242   \n",
        "56                                     601   \n",
        "57                                     196   \n",
        "58                                      63   \n",
        "59                                     104   \n",
        "                                       ...   \n",
        "\n",
        "    mjay_sepscore_yeo_july14_BrD_BrB_skipB  \\\n",
        "0                                      129   \n",
        "1                                      278   \n",
        "2                                       90   \n",
        "3                                      232   \n",
        "4                                       60   \n",
        "5                                      111   \n",
        "6                                       66   \n",
        "7                                       87   \n",
        "8                                       52   \n",
        "9                                      224   \n",
        "10                                     121   \n",
        "11                                      48   \n",
        "12                                     198   \n",
        "13                                     137   \n",
        "14                                     327   \n",
        "15                                     132   \n",
        "16                                     122   \n",
        "17                                      67   \n",
        "18                                     721   \n",
        "19                                     158   \n",
        "20                                     148   \n",
        "21                                      50   \n",
        "22                                     293   \n",
        "23                                     229   \n",
        "24                                     225   \n",
        "25                                      51   \n",
        "26                                     397   \n",
        "27                                     261   \n",
        "28                                     366   \n",
        "29                                     510   \n",
        "30                                     144   \n",
        "31                                     180   \n",
        "32                                     306   \n",
        "33                                      67   \n",
        "34                                     178   \n",
        "35                                     171   \n",
        "36                                     120   \n",
        "37                                     158   \n",
        "38                                     245   \n",
        "39                                    1045   \n",
        "40                                      99   \n",
        "41                                     681   \n",
        "42                                     602   \n",
        "43                                    1713   \n",
        "44                                    2274   \n",
        "45                                      91   \n",
        "46                                     206   \n",
        "47                                     150   \n",
        "48                                      85   \n",
        "49                                     485   \n",
        "50                                     122   \n",
        "51                                      73   \n",
        "52                                     114   \n",
        "53                                     115   \n",
        "54                                      78   \n",
        "55                                     221   \n",
        "56                                     571   \n",
        "57                                     194   \n",
        "58                                      54   \n",
        "59                                     100   \n",
        "                                       ...   \n",
        "\n",
        "    mjay_sepscore_yeo_july14_BrD_BrB_inclA  \\\n",
        "0                                      110   \n",
        "1                                      149   \n",
        "2                                      170   \n",
        "3                                     3023   \n",
        "4                                      404   \n",
        "5                                      294   \n",
        "6                                      135   \n",
        "7                                      106   \n",
        "8                                      511   \n",
        "9                                     1102   \n",
        "10                                     163   \n",
        "11                                     346   \n",
        "12                                      99   \n",
        "13                                     157   \n",
        "14                                     314   \n",
        "15                                      91   \n",
        "16                                     184   \n",
        "17                                     160   \n",
        "18                                    1095   \n",
        "19                                     592   \n",
        "20                                     401   \n",
        "21                                     505   \n",
        "22                                    1790   \n",
        "23                                      78   \n",
        "24                                     189   \n",
        "25                                     260   \n",
        "26                                      33   \n",
        "27                                     761   \n",
        "28                                     312   \n",
        "29                                     110   \n",
        "30                                    1521   \n",
        "31                                     119   \n",
        "32                                     530   \n",
        "33                                     137   \n",
        "34                                     168   \n",
        "35                                     438   \n",
        "36                                     166   \n",
        "37                                    1046   \n",
        "38                                     313   \n",
        "39                                    1178   \n",
        "40                                      64   \n",
        "41                                     901   \n",
        "42                                     169   \n",
        "43                                     143   \n",
        "44                                     252   \n",
        "45                                      63   \n",
        "46                                      54   \n",
        "47                                     866   \n",
        "48                                     312   \n",
        "49                                      87   \n",
        "50                                     202   \n",
        "51                                    1542   \n",
        "52                                      60   \n",
        "53                                     188   \n",
        "54                                      78   \n",
        "55                                     167   \n",
        "56                                     267   \n",
        "57                                     802   \n",
        "58                                     104   \n",
        "59                                     496   \n",
        "                                       ...   \n",
        "\n",
        "    mjay_sepscore_yeo_july14_BrD_BrB_inclB   \n",
        "0                                       110  \n",
        "1                                       137  \n",
        "2                                       164  \n",
        "3                                      3087  \n",
        "4                                       419  \n",
        "5                                       283  \n",
        "6                                       153  \n",
        "7                                       102  \n",
        "8                                       515  \n",
        "9                                      1121  \n",
        "10                                      169  \n",
        "11                                      341  \n",
        "12                                       93  \n",
        "13                                      165  \n",
        "14                                      335  \n",
        "15                                       90  \n",
        "16                                      179  \n",
        "17                                      174  \n",
        "18                                     1140  \n",
        "19                                      624  \n",
        "20                                      394  \n",
        "21                                      455  \n",
        "22                                     1931  \n",
        "23                                       94  \n",
        "24                                      189  \n",
        "25                                      289  \n",
        "26                                       31  \n",
        "27                                      724  \n",
        "28                                      305  \n",
        "29                                      113  \n",
        "30                                     1470  \n",
        "31                                      115  \n",
        "32                                      499  \n",
        "33                                      130  \n",
        "34                                      171  \n",
        "35                                      418  \n",
        "36                                      166  \n",
        "37                                     1024  \n",
        "38                                      305  \n",
        "39                                     1201  \n",
        "40                                       70  \n",
        "41                                      821  \n",
        "42                                      160  \n",
        "43                                      142  \n",
        "44                                      257  \n",
        "45                                       61  \n",
        "46                                       53  \n",
        "47                                      873  \n",
        "48                                      317  \n",
        "49                                       78  \n",
        "50                                      195  \n",
        "51                                     1490  \n",
        "52                                       60  \n",
        "53                                      182  \n",
        "54                                       81  \n",
        "55                                      173  \n",
        "56                                      283  \n",
        "57                                      773  \n",
        "58                                       98  \n",
        "59                                      487  \n",
        "                                        ...  \n",
        "\n",
        "[22639 rows x 12 columns]"
       ]
      }
     ],
     "prompt_number": 18
    },
    {
     "cell_type": "code",
     "collapsed": false,
     "input": [
      "df[['mjay_sepscore_yeo_july14_BrD_BrB']]"
     ],
     "language": "python",
     "metadata": {},
     "outputs": [
      {
       "html": [
        "<div style=\"max-height:1000px;max-width:1500px;overflow:auto;\">\n",
        "<table border=\"1\" class=\"dataframe\">\n",
        "  <thead>\n",
        "    <tr style=\"text-align: right;\">\n",
        "      <th></th>\n",
        "      <th>mjay_sepscore_yeo_july14_BrD_BrB</th>\n",
        "    </tr>\n",
        "  </thead>\n",
        "  <tbody>\n",
        "    <tr>\n",
        "      <th>0 </th>\n",
        "      <td>            Tom1l1_1_s0e17_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>1 </th>\n",
        "      <td>                 Mxi1_1_s0e7_n2</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>2 </th>\n",
        "      <td>         Slc17a7_1_s0e6_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>3 </th>\n",
        "      <td>             Prkce_1_s0e37_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>4 </th>\n",
        "      <td>         Map4k1_1_s0e59_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>5 </th>\n",
        "      <td>           Rbm14_1_s1e7_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>6 </th>\n",
        "      <td>          Papss2_1_s0e5_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>7 </th>\n",
        "      <td>             Gba2_(153)_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>8 </th>\n",
        "      <td>       Slc38a1_2_s28e38_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>9 </th>\n",
        "      <td>                 Ilf3_(98)_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>10</th>\n",
        "      <td>                Ubac2_(48)_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>11</th>\n",
        "      <td>              Bsg_(348)_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>12</th>\n",
        "      <td>             Gusb_(396)_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>13</th>\n",
        "      <td>           Gdf15_1_s0e4_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>14</th>\n",
        "      <td>            Dnajc1_1_s1e13_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>15</th>\n",
        "      <td>        Cep110_1_s53e66_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>16</th>\n",
        "      <td>          Psd3_1_s40e45_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>17</th>\n",
        "      <td>         Dnaic2_1_s7e32_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>18</th>\n",
        "      <td>               Rlf_1_s0e12_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>19</th>\n",
        "      <td>             ORF19_(81)_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>20</th>\n",
        "      <td>           Mbd3_1_s0e10_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>21</th>\n",
        "      <td>             Cep72_(34)_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>22</th>\n",
        "      <td>         Fam134b_1_s0e7_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>23</th>\n",
        "      <td>             Pacsin2_(123)_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>24</th>\n",
        "      <td>               Eif2a_(119)_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>25</th>\n",
        "      <td>                Enpp5_(83)_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>26</th>\n",
        "      <td>                Cpne5_(51)_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>27</th>\n",
        "      <td>              Bai3_(99)_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>28</th>\n",
        "      <td>                Tead3_1_s0e7_n1</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>29</th>\n",
        "      <td>             Commd5_1_s0e6_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>30</th>\n",
        "      <td>              Cadm1_1_s14e22_n1</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>31</th>\n",
        "      <td>           Stk38l_(145_52)_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>32</th>\n",
        "      <td>            Rmnd5b_(69)_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>33</th>\n",
        "      <td>             Immp2l_1_s0e4_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>34</th>\n",
        "      <td>                Rgs3_1_s0e55_n5</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>35</th>\n",
        "      <td>         Hspa4_1_s31e39_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>36</th>\n",
        "      <td>               Gpr19_2_s8e13_n3</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>37</th>\n",
        "      <td>                Braf_(120)_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>38</th>\n",
        "      <td>       5730419I09Rik_(152)_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>39</th>\n",
        "      <td>       EG433182_1_s7e26_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>40</th>\n",
        "      <td>          Prpf40b_(212)_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>41</th>\n",
        "      <td>               Plcb1_(118)_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>42</th>\n",
        "      <td>            Zfp467_2_s9e15_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>43</th>\n",
        "      <td>            Phf14_1_s31e38_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>44</th>\n",
        "      <td>            Bai2_(165b)_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>45</th>\n",
        "      <td>             Usp6nl_1_s0e7_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>46</th>\n",
        "      <td>            Farsa_2_s14e19_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>47</th>\n",
        "      <td>             Gpm6b_(91)_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>48</th>\n",
        "      <td>        Tnfrsf12a_(105)_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>49</th>\n",
        "      <td>                Trpc2_1_s1e6_n1</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>50</th>\n",
        "      <td>       4921513D23Rik_(536)_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>51</th>\n",
        "      <td>         uc009hnl-1_(3742)_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>52</th>\n",
        "      <td>              Mvk_(145)_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>53</th>\n",
        "      <td>       Fam110b_1_s11e20_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>54</th>\n",
        "      <td> 4932438A13Rik_4_s47e51_n3_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>55</th>\n",
        "      <td>              Mtf2_1_s0e11_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>56</th>\n",
        "      <td>                Phkg2_(41)_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>57</th>\n",
        "      <td>          Gm1964_(110_144)_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>58</th>\n",
        "      <td>            Atp2b2_(33)_include</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>59</th>\n",
        "      <td>              Net1_1_s0e11_skip</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th></th>\n",
        "      <td>...</td>\n",
        "    </tr>\n",
        "  </tbody>\n",
        "</table>\n",
        "<p>22755 rows \u00d7 1 columns</p>\n",
        "</div>"
       ],
       "metadata": {},
       "output_type": "pyout",
       "prompt_number": 19,
       "text": [
        "   mjay_sepscore_yeo_july14_BrD_BrB\n",
        "0               Tom1l1_1_s0e17_skip\n",
        "1                    Mxi1_1_s0e7_n2\n",
        "2            Slc17a7_1_s0e6_include\n",
        "3                Prkce_1_s0e37_skip\n",
        "4            Map4k1_1_s0e59_include\n",
        "5              Rbm14_1_s1e7_include\n",
        "6             Papss2_1_s0e5_include\n",
        "7                Gba2_(153)_include\n",
        "8          Slc38a1_2_s28e38_include\n",
        "9                    Ilf3_(98)_skip\n",
        "10                  Ubac2_(48)_skip\n",
        "11                Bsg_(348)_include\n",
        "12               Gusb_(396)_include\n",
        "13             Gdf15_1_s0e4_include\n",
        "14              Dnajc1_1_s1e13_skip\n",
        "15          Cep110_1_s53e66_include\n",
        "16            Psd3_1_s40e45_include\n",
        "17           Dnaic2_1_s7e32_include\n",
        "18                 Rlf_1_s0e12_skip\n",
        "19               ORF19_(81)_include\n",
        "20             Mbd3_1_s0e10_include\n",
        "21               Cep72_(34)_include\n",
        "22           Fam134b_1_s0e7_include\n",
        "23               Pacsin2_(123)_skip\n",
        "24                 Eif2a_(119)_skip\n",
        "25                  Enpp5_(83)_skip\n",
        "26                  Cpne5_(51)_skip\n",
        "27                Bai3_(99)_include\n",
        "28                  Tead3_1_s0e7_n1\n",
        "29               Commd5_1_s0e6_skip\n",
        "30                Cadm1_1_s14e22_n1\n",
        "31             Stk38l_(145_52)_skip\n",
        "32              Rmnd5b_(69)_include\n",
        "33               Immp2l_1_s0e4_skip\n",
        "34                  Rgs3_1_s0e55_n5\n",
        "35           Hspa4_1_s31e39_include\n",
        "36                 Gpr19_2_s8e13_n3\n",
        "37                  Braf_(120)_skip\n",
        "38         5730419I09Rik_(152)_skip\n",
        "39         EG433182_1_s7e26_include\n",
        "40            Prpf40b_(212)_include\n",
        "41                 Plcb1_(118)_skip\n",
        "42              Zfp467_2_s9e15_skip\n",
        "43              Phf14_1_s31e38_skip\n",
        "44              Bai2_(165b)_include\n",
        "45               Usp6nl_1_s0e7_skip\n",
        "46              Farsa_2_s14e19_skip\n",
        "47               Gpm6b_(91)_include\n",
        "48          Tnfrsf12a_(105)_include\n",
        "49                  Trpc2_1_s1e6_n1\n",
        "50         4921513D23Rik_(536)_skip\n",
        "51           uc009hnl-1_(3742)_skip\n",
        "52                Mvk_(145)_include\n",
        "53         Fam110b_1_s11e20_include\n",
        "54   4932438A13Rik_4_s47e51_n3_skip\n",
        "55                Mtf2_1_s0e11_skip\n",
        "56                  Phkg2_(41)_skip\n",
        "57            Gm1964_(110_144)_skip\n",
        "58              Atp2b2_(33)_include\n",
        "59                Net1_1_s0e11_skip\n",
        "                                ...\n",
        "\n",
        "[22755 rows x 1 columns]"
       ]
      }
     ],
     "prompt_number": 19
    },
    {
     "cell_type": "code",
     "collapsed": false,
     "input": [
      "df.mjay_sepscore_yeo_july14_ELAVD_SCB"
     ],
     "language": "python",
     "metadata": {},
     "outputs": [
      {
       "metadata": {},
       "output_type": "pyout",
       "prompt_number": 10,
       "text": [
        "0          Tom1l1_1_s0e17_skip\n",
        "1               Mxi1_1_s0e7_n2\n",
        "2       Slc17a7_1_s0e6_include\n",
        "3           Prkce_1_s0e37_skip\n",
        "4       Map4k1_1_s0e59_include\n",
        "5         Rbm14_1_s1e7_include\n",
        "6        Papss2_1_s0e5_include\n",
        "7           Gba2_(153)_include\n",
        "8     Slc38a1_2_s28e38_include\n",
        "9               Ilf3_(98)_skip\n",
        "10             Ubac2_(48)_skip\n",
        "11           Bsg_(348)_include\n",
        "12          Gusb_(396)_include\n",
        "13        Gdf15_1_s0e4_include\n",
        "14         Dnajc1_1_s1e13_skip\n",
        "...\n",
        "22740           Rhbdf2_(667)_include\n",
        "22741          Thsd4_1_s0e23_include\n",
        "22742         BC021381_(240)_include\n",
        "22743               Thrap3_(88)_skip\n",
        "22744    4930562D19Rik_(136)_include\n",
        "22745               Pola2_(651)_skip\n",
        "22746          Eif2a_1_s0e14_include\n",
        "22747          Inpp5f_(1304)_include\n",
        "22748         Tada1l_1_s5e17_include\n",
        "22749             Foxred1_(413)_skip\n",
        "22750         Dach1_2_s21e25_include\n",
        "22751     1110007C09Rik_(60)_include\n",
        "22752              Cd151_1_s0e7_skip\n",
        "22753             Gstm1_(77)_include\n",
        "22754                Pde4b_(37)_skip\n",
        "Name: mjay_sepscore_yeo_july14_ELAVD_SCB, Length: 22755, dtype: object"
       ]
      }
     ],
     "prompt_number": 10
    },
    {
     "cell_type": "code",
     "collapsed": false,
     "input": [],
     "language": "python",
     "metadata": {},
     "outputs": []
    }
   ],
   "metadata": {}
  }
 ]
}