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New module: automapper #60

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abhidg opened this issue Jul 18, 2024 · 0 comments
Open

New module: automapper #60

abhidg opened this issue Jul 18, 2024 · 0 comments
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@abhidg
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abhidg commented Jul 18, 2024

Automapper should map from arbitrary wide format data to ARC schema questions and choices. ARC schema (with choices) will be mapped to FHIR. This way, we get the benefit of AI-enabled mapping, while not mapping to the complex FHIR schema directly.

Output:

  • Subset of ARC mapped to FHIR
  • Automapper library to create a mapping spreadsheet that can be edited by the user, which is then passed to transformation library to create a FHIRflat dataset
  • Validation with dengue data mapping, with atleast 80% accuracy for first choice of mapping
  • Test on old data, measure mapping speed
  • Basic quality checking of output data

In many cases, data will be collected directly in ARC compliant REDCap, which would mean that automapper will not be required at all in these cases.

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