Skip to content

Latest commit

 

History

History
74 lines (55 loc) · 2.18 KB

README.md

File metadata and controls

74 lines (55 loc) · 2.18 KB
Raw

ggsegArslan

R-CMD-check DOI

This package contains dataset for plotting the arslan atlas ggseg and ggseg3d.

Arslan, S., & Rueckert, D. (2015, October). Multi-level parcellation of the cerebral cortex using resting-state fMRI. In International Conference on Medical Image Computing and Computer-Assisted Intervention (pp. 47-54). Springer, Cham. SpringerLink

To learn how to use these atlases, please look at the documentation for ggseg and ggseg3d

Installation

We recommend installing the ggseg-atlases through the ggseg r-universe:

# Enable this universe
options(repos = c(
    ggseg = 'https://ggseg.r-universe.dev',
    CRAN = 'https://cloud.r-project.org'))

# Install some packages
install.packages('ggsegArslan')

You can install the released version of ggsegArslan from GitHub with:

# install.packages("remotes")
remotes::install_github("ggseg/ggsegArslan")
library(ggseg)
#> Warning: package 'ggseg' was built under R version 4.1.1
#> Loading required package: ggplot2
library(ggseg3d)
library(ggsegArslan)

plot(arslan) +
  theme(legend.position = "bottom", 
        legend.text = element_text(size = 9)) +
  guides(fill = guide_legend(ncol = 6))

library(dplyr)
ggseg3d(atlas = arslan_3d) %>% 
  add_glassbrain() %>% 
  pan_camera("right lateral")

Please note that the ‘ggsegArslan’ project is released with a Contributor Code of Conduct. By contributing to this project, you agree to abide by its terms.