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Updating production Minerva #386

Merged
merged 18 commits into from
May 25, 2021
Merged

Updating production Minerva #386

merged 18 commits into from
May 25, 2021

Commits on Nov 16, 2020

  1. reparrallelized model load and added a report of n skipped files

    @goodb
    goodb committed Nov 16, 2020
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Commits on Nov 25, 2020

  1. hiding a problem with attempt to fix deprecated classes in stat gener… 

    …ator

this allows the code to continue if this error is encountered.  Would be better to fix the bug but not sure its worth the effort unless this gets used.
    @goodb
    goodb committed Nov 25, 2020
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Commits on Dec 18, 2020

  1. Added ART api for stored model https://github.com/geneontology/minerv… 

    …a/issues/364q
    @tmushayahama
    tmushayahama committed Dec 18, 2020
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Commits on Jan 6, 2021

  1. added the test setup. added test model folder

    @tmushayahama
    tmushayahama committed Jan 6, 2021
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  2. added the tests for stored model api (addIndivudls, different length)

    @tmushayahama
    tmushayahama committed Jan 6, 2021
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Commits on Jan 7, 2021

  1. now using the JsonModel equal function

    @tmushayahama
    tmushayahama committed Jan 7, 2021
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Commits on Jan 8, 2021

  1. Merge pull request #365 from geneontology/issue-364-stored-model-api 

    @kltm could you please deploy this on dev so that we can check everything is ok before doing a second PR for the ART workbench ? Thanks
    @lpalbou
    lpalbou committed Jan 8, 2021
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Commits on Mar 4, 2021

  1. GROUP BY only model id. Use aggregates for everything else, in order … 

    …to align number of results returned with the number of matching models.
    @balhoff
    balhoff committed Mar 4, 2021
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  2. Update handling of PMID matches for new GROUP BY.

    @balhoff
    balhoff committed Mar 4, 2021
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Commits on Mar 12, 2021

  1. Merge pull request #372 from geneontology/issue-370 

    GROUP BY only model id.
    @kltm
    kltm committed Mar 12, 2021
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Commits on Mar 16, 2021

  1. Fix mismatch in date variable so that ordering works.

    @balhoff
    balhoff committed Mar 16, 2021
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Commits on Mar 17, 2021

  1. Merge pull request #374 from geneontology/date-ordering 

    Fix mismatch in date variable so that ordering works.
    @kltm
    kltm committed Mar 17, 2021
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Commits on Apr 1, 2021

  1. Return all matching individuals.

    @balhoff
    balhoff committed Apr 1, 2021
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Commits on Apr 21, 2021

  1. Close output streams when dumping files.

    @balhoff
    balhoff committed Apr 21, 2021
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  2. Merge pull request #381 from geneontology/close-stream-dev 

    Close output streams when dumping files.
    @kltm
    kltm committed Apr 21, 2021
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Commits on May 4, 2021

  1. add located_in and is_active_in to allowed list of relations

    @sierra-moxon
    sierra-moxon committed May 4, 2021
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  2. fix prefix order

    @sierra-moxon
    sierra-moxon committed May 4, 2021
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Commits on May 6, 2021

  1. Merge pull request #384 from sierra-moxon/dev 

    add located_in and is_active_in to allowed list of relations fixes #385
    @balhoff
    balhoff committed May 6, 2021
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