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Relation for extension is excluded from download file #318

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ValWood opened this issue Mar 10, 2016 · 2 comments
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Relation for extension is excluded from download file #318

ValWood opened this issue Mar 10, 2016 · 2 comments
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@ValWood
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ValWood commented Mar 10, 2016

relation for extension is excluded from download file
I know I have reported this before about a year ago. You can't interpret the extension in the download without the relation. Dat currently looks like this:

PomBase SPAPB2B4.03 cig2 GO:0061575 PMID:8631306 IDA F G1/S-specific B-type cyclin Cig2 cyc17 protein NCBITaxon:4896 20140611 PomBase PomBase:SPBC11B10.09|GO:0031659

@ValWood
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ValWood commented Mar 10, 2016

I was trying to access protein kinase annotations with extensions so that I could assess whether we had made the reciprocal added_by(gene_product) to our modification annotations.
I would imagine that users are more interested in searching/accessing/downloading annotation extensions by "type" in the first instance. However, it seems that the annotation extension filter only allows any filtering by GO ID.

@kltm
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kltm commented Mar 10, 2016

Dupe of #94.

@kltm kltm changed the title relation for extension is excluded from download file Relation for extension is excluded from download file Mar 10, 2016
@kltm kltm closed this as completed Mar 10, 2016
@kltm kltm modified the milestone: wishlist Jul 27, 2016
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