From 613c2e082875c7b32670440ee627b91d2c3bcab2 Mon Sep 17 00:00:00 2001 From: gbouras13 Date: Wed, 10 Jan 2024 11:25:58 +1030 Subject: [PATCH] fix #303 .tbl output n2 --- bin/post_processing.py | 4 ---- 1 file changed, 4 deletions(-) diff --git a/bin/post_processing.py b/bin/post_processing.py index f748a7f..e1ff16b 100644 --- a/bin/post_processing.py +++ b/bin/post_processing.py @@ -1206,7 +1206,6 @@ def create_tbl( for index, row in self.length_df.iterrows(): contig = str(row["contig"]) f.write(">Feature " + contig + "\n") - subset_df = self.merged_df[self.merged_df["contig"] == contig] for index, row in subset_df.iterrows(): start = str(row["start"]) @@ -1253,7 +1252,6 @@ def create_tbl( ) if self.trna_empty == False: subset_trna_df = trna_df[trna_df["contig"] == contig] - print(subset_trna_df) for index, row in subset_trna_df.iterrows(): start = str(row["start"]) stop = str(row["stop"]) @@ -1287,7 +1285,6 @@ def create_tbl( ) if self.crispr_count > 0: subset_crispr_df = crispr_df[crispr_df["contig"] == contig] - print(subset_crispr_df) for index, row in subset_crispr_df.iterrows(): start = str(row["start"]) stop = str(row["stop"]) @@ -1321,7 +1318,6 @@ def create_tbl( ) if self.tmrna_flag == True: subset_tmrna_df = tmrna_df[tmrna_df["contig"] == contig] - print(subset_tmrna_df) for index, row in subset_tmrna_df.iterrows(): start = str(row["start"]) stop = str(row["stop"])