From 28d1576fce32bed2ce3c0beb20d11b14a4c5f2e7 Mon Sep 17 00:00:00 2001 From: gbouras13 Date: Tue, 7 Nov 2023 11:53:42 +1030 Subject: [PATCH] address #52 revert to check_call --- src/dnaapler/utils/external_tools.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/src/dnaapler/utils/external_tools.py b/src/dnaapler/utils/external_tools.py index c71072d..d69c166 100644 --- a/src/dnaapler/utils/external_tools.py +++ b/src/dnaapler/utils/external_tools.py @@ -52,7 +52,7 @@ def run(self) -> None: @staticmethod def _run_core(command: List[str], stdout_fh, stderr_fh) -> None: - subprocess.call(command, stdout=stdout_fh, stderr=stderr_fh) + subprocess.check_call(command, stdout=stdout_fh, stderr=stderr_fh) @staticmethod def run_tools(