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drop/modules/aberrant-splicing-pipeline/FRASER/Summary.R
@@ -48,7 +48,7 @@ dataset_title <- paste0("Dataset: ", dataset, "--", annotation)
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#' ## Estimation of the optimal latent space dimension
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-if (isTRUE(metadata(ods)[["useOHTtoObtainQ"]])){
+if (isTRUE(metadata(fds)[["useOHTtoObtainQ"]])){
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type <- "jaccard"
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g <- plotEncDimSearch(fds, type=type, plotType="sv")
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g <- g + theme_cowplot(font_size = 16) +
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