test_pull_requests.yml

# Our minimal suite of tests that run on each pull request
name: PR Test

on:
  pull_request:
    branches:
      - main
      - "v*x"

concurrency:
  group: test-${{ github.ref }}
  cancel-in-progress: true

env:
  COLUMNS: 120

jobs:
  import_lint:
    name: Import lint
    timeout-minutes: 5
    runs-on: ubuntu-latest
    steps:
      - uses: actions/checkout@v4
      - name: Set up Python 3.11
        uses: actions/setup-python@v5
        with:
          python-version: 3.11
      - name: Install dependencies
        run: |
          pip install --upgrade pip
          pip install tox
      - name: Run import lint
        run: tox -e import-lint

  manifest:
    # make sure all necessary files will be bundled in the release
    name: Check Manifest
    timeout-minutes: 15
    runs-on: ubuntu-latest
    steps:
      - uses: actions/checkout@v4
      - uses: actions/setup-python@v5
        with:
          python-version: "3.11"
          cache-dependency-path: pyproject.toml
          cache: 'pip'
      - name: Install Dependencies
        run: pip install --upgrade pip
      - name: Install Napari dev
        run: pip install -e .[build]
        env:
          PIP_CONSTRAINT: resources/constraints/constraints_py3.11.txt
      - name: Make Typestubs
        run: |
          make typestubs
      - name: Check Manifest
        run: |
          make check-manifest

  localization_syntax:
    # make sure all necessary files will be bundled in the release
    name: Check l18n syntax
    runs-on: ubuntu-latest
    timeout-minutes: 2
    steps:
      - uses: actions/checkout@v4
      - uses: actions/setup-python@v5
        with:
          python-version: "3.x"
      - name: Check localization formatting
        run: |
          pip install --upgrade pip semgrep
          # f"..." and f'...' are the same for semgrep
          semgrep --error --lang python --pattern 'trans._(f"...")' napari
          semgrep --error --lang python --pattern "trans._(\$X.format(...))" napari

  build_wheel:
    name: Build wheel
    uses: ./.github/workflows/reusable_build_wheel.yml

  test_initial:
    name: Initial test
    uses: ./.github/workflows/reusable_run_tox_test.yml
    needs: build_wheel
    strategy:
      fail-fast: false
      matrix:
        include:
          - python: 3.9
            platform: ubuntu-latest
            backend: pyqt5
            pydantic: "_pydantic_1"
            coverage: no_cov
            min_req: ""
          - python: 3.12
            platform: ubuntu-latest
            backend: pyqt6
            pydantic: ""
            coverage: no_cov
            min_req: ""
    with:
      python_version: ${{ matrix.python }}
      platform: ${{ matrix.platform }}
      qt_backend: ${{ matrix.backend }}
      coverage: ${{ matrix.coverage }}
      min_req: ${{ matrix.MIN_REQ }}
      constraints_suffix: ${{ matrix.pydantic }}

  test:
    name: ${{ matrix.platform }}
    uses: ./.github/workflows/reusable_run_tox_test.yml
    needs: test_initial
    strategy:
      fail-fast: false
      matrix:
        platform: [ ubuntu-latest ]
        python: [ "3.10", "3.11" ]
        backend: [ "pyqt5,pyside6" ]
        coverage: [ cov ]
        pydantic: ["_pydantic_1"]
        include:
          # Windows py310
          - python: "3.10"
            platform: windows-latest
            backend: pyqt5 #,pyside2
            coverage: no_cov
          - python: "3.12"
            platform: windows-latest
            backend: pyqt6
            coverage: cov
          - python: "3.12"
            platform: macos-13
            backend: pyqt5
            coverage: no_cov
          - python: "3.12"
            platform: macos-latest
            backend: pyqt5
            coverage: no_cov
          # minimum specified requirements
          - python: "3.9"
            platform: ubuntu-20.04
            backend: pyqt5
            MIN_REQ: 1
            coverage: cov
          - python: "3.11"
            platform: ubuntu-22.04
            backend: pyqt5
            coverage: cov
            pydantic: ""
            tox_extras: "optional"
          # test without any Qt backends
          - python: "3.10"
            platform: ubuntu-20.04
            backend: headless
            coverage: no_cov
          - python: "3.12"
            platform: ubuntu-latest
            backend: pyqt6
            coverage: cov
            tox_extras: "testing_extra"
          # test with no numba
          - python: "3.12"
            platform: ubuntu-latest
            backend: pyqt6_no_numba
            coverage: cov
            pydantic: ""
          # pyside2 test
          - python: "3.10"
            platform: ubuntu-latest
            backend: pyside2
            coverage: no_cov
    with:
      python_version: ${{ matrix.python }}
      platform: ${{ matrix.platform }}
      qt_backend: ${{ matrix.backend }}
      min_req: ${{ matrix.MIN_REQ }}
      coverage: ${{ matrix.coverage }}
      tox_extras: ${{ matrix.tox_extras }}
      constraints_suffix: ${{ matrix.pydantic }}


  test_pip_install:
    needs: test_initial
    name: pip install
    uses: ./.github/workflows/reusable_pip_test.yml

  test_examples:
    name: test examples
    uses: ./.github/workflows/reusable_run_tox_test.yml
    needs: test_initial
    with:
        toxenv: py39-linux-pyside2-examples-cov
        timeout: 60
        python_version: 3.9
        constraints_suffix: _examples
        coverage: cov

  coverage_report:
    if: ${{ always() }}
    needs:
      - test
      - test_examples
    uses: ./.github/workflows/reusable_coverage_upload.yml
    secrets:
      codecov_token: ${{ secrets.CODECOV_TOKEN }}


  test_benchmarks:
    name: test benchmarks
    runs-on: ubuntu-latest
    needs: test_initial
    timeout-minutes: 60
    env:
      GIT_LFS_SKIP_SMUDGE: 1
    steps:
      - uses: actions/checkout@v4
        with:
          fetch-depth: 0

      - uses: actions/setup-python@v5
        with:
          python-version: 3.11
          cache-dependency-path: pyproject.toml

      - uses: tlambert03/setup-qt-libs@v1

      - uses: octokit/request-action@v2.x
        # here we get hash of the latest release commit to compare with PR
        id: latest_release
        with:
          route: GET /repos/{owner}/{repo}/releases/latest
          owner: napari
          repo: napari
        env:
          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}

      - name: install dependencies
        run: |
          pip install --upgrade pip
          pip install "asv[virtualenv]"
        env:
          PIP_CONSTRAINT: resources/constraints/benchmark.txt

      - name: asv machine
        run: asv machine --yes

      - name: Run benchmarks PR
        uses: aganders3/headless-gui@v2
        with:
          run: |
            asv run --show-stderr --quick  --attribute timeout=300 HEAD^!
        env:
          PR: 1 # prevents asv from running very compute-intensive benchmarks
          PIP_CONSTRAINT: ${{ github.workspace }}/resources/constraints/benchmark.txt

      - name: Run benchmarks latest release
        # here we check if the benchmark on the latest release is not broken
        uses: aganders3/headless-gui@v2
        with:
          run: |
            asv run --show-stderr --quick  --attribute timeout=300  ${{ fromJSON(steps.latest_release.outputs.data).target_commitish }}^!
        env:
          PR: 1  # prevents asv from running very compute-intensive benchmarks
          PIP_CONSTRAINT: ${{ github.workspace }}/resources/constraints/benchmark.txt