Template R code for bioinformatics analysis pipelines.
Markdown files encompass the analysis of various Illumina paired-end bulk RNAseq experiments
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includes standard, high-level bioinformatics/transcriptomics visualizations, including:
- volcano plots
- MA plots
- heatmaps
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also includes higher-level analyses on subsets of the data:
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gene ontology querying and statistical analysis
- visualizations as bar plots
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weighted gene co-expression network
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