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Copy pathexportXML_arrow.m
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exportXML_arrow.m
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function success = exportXML_arrow(fullname,scan_scale, task_id,workdir,Left, Top, roi_w, roi_h)
%EXPORTXML Summary of this function goes here
% process data
try
success = 0;
length = 2*(roi_w + roi_h);
lengthM = length*scan_scale;
area= roi_w* roi_h;
areaM= area * scan_scale *scan_scale;
x1 = Left;
y1 = Top;
x2 = Left + roi_w;
y2 = Top;
x3 = Left + roi_w;
y3 = Top + roi_h;
x4 = Left;
y4 = Top + roi_h;
lengthArrow = 100;
lengthArrowM = lengthArrow*scan_scale;
xArrow1 = Left + ceil(roi_w/2)-30;
xArrow2 = xArrow1 - lengthArrow;
yArrow = Top + ceil(roi_h/2);
indexdot = findstr(fullname, '.');
imageDir = fullname(1:(indexdot(end)-1));
filename = [imageDir,'.xml'];
% generate xml
% annotation information
docNode = com.mathworks.xml.XMLUtils.createDocument('Annotations');
docRootNode = docNode.getDocumentElement;
docRootNode.setAttribute('MicronsPerPixel','0.2279');
% image information
entry_level_info = docNode.createElement('Image_information');
entry_level_info.setAttribute('Full_path',fullname);
docNode.getDocumentElement.appendChild(entry_level_info);
entry_level1 = docNode.createElement('Annotation');
entry_level1.setAttribute('MacroName','');
entry_level1.setAttribute('MarkupImagePath','');
entry_level1.setAttribute('Selected','1');
entry_level1.setAttribute('Visible','1');
entry_level1.setAttribute('LineColor','65280');
entry_level1.setAttribute('Type','4');
entry_level1.setAttribute('Incremental','0');
entry_level1.setAttribute('LineColorReadOnly','0');
entry_level1.setAttribute('NameReadOnly','0');
entry_level1.setAttribute('ReadOnly','0');
entry_level1.setAttribute('Name','');
entry_level1.setAttribute('Id','1');
docNode.getDocumentElement.appendChild(entry_level1);
entry_level1_1 = docNode.createElement('Attributes');
entry_level1.appendChild(entry_level1_1);
entry_level1_1_1 = docNode.createElement('Attribute');
entry_level1_1_1.setAttribute('Name','Description');
entry_level1_1_1.setAttribute('Id','0');
entry_level1_1_1.setAttribute('Value','');
entry_level1_1.appendChild(entry_level1_1_1);
entry_level1_2 = docNode.createElement('Regions');
entry_level1.appendChild(entry_level1_2);
entry_level1_2_1 = docNode.createElement('RegionAttributeHeaders');
entry_level1_2.appendChild(entry_level1_2_1);
entry_level1_2_1_1 = docNode.createElement('AttributeHeaders');
entry_level1_2_1_1.setAttribute('Name','Region');
entry_level1_2_1_1.setAttribute('Id','9999');
entry_level1_2_1_1.setAttribute('ColumunWidth','-1');
entry_level1_2_1.appendChild(entry_level1_2_1_1);
entry_level1_2_1_2 = docNode.createElement('AttributeHeaders');
entry_level1_2_1_2.setAttribute('Name','Length');
entry_level1_2_1_2.setAttribute('Id','9997');
entry_level1_2_1_2.setAttribute('ColumunWidth','-1');
entry_level1_2_1.appendChild(entry_level1_2_1_2);
entry_level1_2_1_3 = docNode.createElement('AttributeHeaders');
entry_level1_2_1_3.setAttribute('Name','Area');
entry_level1_2_1_3.setAttribute('Id','9996');
entry_level1_2_1_3.setAttribute('ColumunWidth','-1');
entry_level1_2_1.appendChild(entry_level1_2_1_3);
entry_level1_2_1_4 = docNode.createElement('AttributeHeaders');
entry_level1_2_1_4.setAttribute('Name','Text');
entry_level1_2_1_4.setAttribute('Id','9998');
entry_level1_2_1_4.setAttribute('ColumunWidth','-1');
entry_level1_2_1.appendChild(entry_level1_2_1_4);
entry_level1_2_1_5 = docNode.createElement('AttributeHeaders');
entry_level1_2_1_5.setAttribute('Name','Description');
entry_level1_2_1_5.setAttribute('Id','1');
entry_level1_2_1_5.setAttribute('ColumunWidth','-1');
entry_level1_2_1.appendChild(entry_level1_2_1_5);
% boundary
entry_level1_2_2 = docNode.createElement('Region');
entry_level1_2.appendChild(entry_level1_2_2);
entry_level1_2_2.setAttribute('Selected','0');
entry_level1_2_2.setAttribute('Type','1');
entry_level1_2_2.setAttribute('Id','1');
entry_level1_2_2.setAttribute('DisplayId','1');
entry_level1_2_2.setAttribute('Analyze','0');
entry_level1_2_2.setAttribute('InputRegionId','0');
entry_level1_2_2.setAttribute('NegativeROA','0');
entry_level1_2_2.setAttribute('Text','');
entry_level1_2_2.setAttribute('AreaMicrons',num2str(areaM));
entry_level1_2_2.setAttribute('LengthMicrons',num2str(lengthM));
entry_level1_2_2.setAttribute('Area',num2str(area));
entry_level1_2_2.setAttribute('Length',num2str(length));
entry_level1_2_2.setAttribute('ImageFocus','-1');
entry_level1_2_2.setAttribute('ImageLocation','');
entry_level1_2_2.setAttribute('Zoom','0.022562');
entry_level1_2_2_1 = docNode.createElement('Attributes');
entry_level1_2_2.appendChild(entry_level1_2_2_1);
entry_level1_2_2_2 = docNode.createElement('Vertices');
entry_level1_2_2.appendChild(entry_level1_2_2_2);
entry_level1_2_2_2_1 = docNode.createElement('Vertex');
entry_level1_2_2_2.appendChild(entry_level1_2_2_2_1);
entry_level1_2_2_2_1.setAttribute('Z',num2str(0));
entry_level1_2_2_2_1.setAttribute('Y',num2str(y1));
entry_level1_2_2_2_1.setAttribute('X',num2str(x1));
entry_level1_2_2_2_2 = docNode.createElement('Vertex');
entry_level1_2_2_2.appendChild(entry_level1_2_2_2_2);
entry_level1_2_2_2_2.setAttribute('Z',num2str(0));
entry_level1_2_2_2_2.setAttribute('Y',num2str(y2));
entry_level1_2_2_2_2.setAttribute('X',num2str(x2));
entry_level1_2_2_2_3 = docNode.createElement('Vertex');
entry_level1_2_2_2.appendChild(entry_level1_2_2_2_3);
entry_level1_2_2_2_3.setAttribute('Z',num2str(0));
entry_level1_2_2_2_3.setAttribute('Y',num2str(y3));
entry_level1_2_2_2_3.setAttribute('X',num2str(x3));
entry_level1_2_2_2_4 = docNode.createElement('Vertex');
entry_level1_2_2_2.appendChild(entry_level1_2_2_2_4);
entry_level1_2_2_2_4.setAttribute('Z',num2str(0));
entry_level1_2_2_2_4.setAttribute('Y',num2str(y4));
entry_level1_2_2_2_4.setAttribute('X',num2str(x4));
% arrow
entry_level1_2_3 = docNode.createElement('Region');
entry_level1_2.appendChild(entry_level1_2_3);
entry_level1_2_3.setAttribute('Selected','1');
entry_level1_2_3.setAttribute('Type','3');
entry_level1_2_3.setAttribute('Id','2');
entry_level1_2_3.setAttribute('DisplayId','2');
entry_level1_2_3.setAttribute('Analyze','1');
entry_level1_2_3.setAttribute('InputRegionId','0');
entry_level1_2_3.setAttribute('NegativeROA','0');
entry_level1_2_3.setAttribute('Text','');
entry_level1_2_3.setAttribute('AreaMicrons','0.0');
entry_level1_2_3.setAttribute('LengthMicrons',num2str(lengthArrowM));
entry_level1_2_3.setAttribute('Area','0.0');
entry_level1_2_3.setAttribute('Length',num2str(lengthArrow));
entry_level1_2_3.setAttribute('ImageFocus','-1');
entry_level1_2_3.setAttribute('ImageLocation','');
entry_level1_2_3.setAttribute('Zoom','0.022562');
entry_level1_2_3_1 = docNode.createElement('Attributes');
entry_level1_2_3.appendChild(entry_level1_2_3_1);
entry_level1_2_3_2 = docNode.createElement('Vertices');
entry_level1_2_3.appendChild(entry_level1_2_3_2);
entry_level1_2_3_2_1 = docNode.createElement('Vertex');
entry_level1_2_3_2.appendChild(entry_level1_2_3_2_1);
entry_level1_2_3_2_1.setAttribute('Z',num2str(0));
entry_level1_2_3_2_1.setAttribute('Y',num2str(yArrow));
entry_level1_2_3_2_1.setAttribute('X',num2str(xArrow1));
entry_level1_2_3_2_2 = docNode.createElement('Vertex');
entry_level1_2_3_2.appendChild(entry_level1_2_3_2_2);
entry_level1_2_3_2_2.setAttribute('Z',num2str(0));
entry_level1_2_3_2_2.setAttribute('Y',num2str(yArrow));
entry_level1_2_3_2_2.setAttribute('X',num2str(xArrow2));
entry_level1_2_4 = docNode.createElement('plots');
entry_level1_2.appendChild(entry_level1_2_4);
xmlwrite(filename,docNode);
% delete the first line from XML file
fid = fopen(filename, 'r') ; % Open source file.
fgetl(fid) ; % Read/discard line.
buffer = fread(fid, Inf) ; % Read rest of the file.
fclose(fid);
fid = fopen(filename, 'w') ; % Open destination file.
fwrite(fid, buffer) ; % Save to file.
fclose(fid) ;
winopen(fullname);
% [status2,cmdout2]=system(fullname);
%[status2,cmdout2]=system(fullname,'-echo');
success = 1;
catch ME
error_show(ME)
end
end