Looking for your help on integrating a repair tool to Repairnator

[DehengYang]

Dear the Repairnator Team,

Thank you for contributing the great Repairnator tool to the community. That's really an amazing tool to automate the repair process and aid practitioners in real-world scenarios.

I am trying to integrate a repair tool I developed (named "TransplantFix") into Repairnator. I mainly refer to the following links:

• https://github.com/eclipse/repairnator/blob/master/doc/README.md
• https://github.com/eclipse/repairnator/blob/master/doc/add-repair-tool.md

And during the exploration process, I have encountered the following problems, which I would like to report for your further guidance and help:

1. Fail to replicate:
   I ran the command in https://github.com/eclipse/repairnator/blob/master/doc/README.md#travis-scanner:

git clone https://github.com/eclipse/repairnator/
cd repairnator/src/scripts/
# doc at https://github.com/eclipse/repairnator/blob/master/doc/scripts.md#launch_rtscannersh
bash launch_rtscanner.sh

But the error occurs:

[main] 16:08:35.579 INFO f.i.s.r.realtime.RTLauncher - Initialize file serializer engines.
[main] 16:08:35.581 INFO f.i.s.r.realtime.RTLauncher - MongoDB won't be used for serialization.
[main] 16:08:35.582 INFO f.i.s.r.realtime.RTLauncher - The summary email engine will not be used.
[main] 16:08:35.582 INFO f.i.s.r.realtime.RTLauncher - Init RTScanner...
[main] 16:08:35.582 INFO f.i.s.r.realtime.RTLauncher - RTScanner mode : REPAIR
[main] 16:08:35.582 INFO f.i.s.r.realtime.RTLauncher - Number of tools[Ljava.lang.String;@7f3b84b8
[main] 16:08:35.603 INFO f.i.s.r.r.DockerPipelineRunner - Init build runner
[main] 16:08:35.603 INFO f.i.s.r.r.DockerPipelineRunner - Init build runner
[main] 16:08:36.398 INFO f.i.s.r.r.DockerPipelineRunner - Executor service initialized with 4 threads.
[main] 16:08:36.401 INFO f.i.s.r.realtime.RTScanner - Init whitelist repository...
[main] 16:08:36.401 INFO f.i.s.r.realtime.RTScanner - Whitelist initialized with: 0 entries
[main] 16:08:36.401 INFO f.i.s.r.realtime.RTScanner - Init blacklist repository...
[main] 16:08:36.402 INFO f.i.s.r.realtime.RTScanner - Blacklist initialized with: 0 entries
[main] 16:08:36.402 INFO f.i.s.r.realtime.RTLauncher - Start RTScanner...
[main] 16:08:36.402 INFO f.i.s.r.realtime.RTScanner - Start running RTScanner...
[main] 16:08:36.431 INFO f.i.s.r.r.DockerPipelineRunner - Executor service initialized with 4 threads.
[Thread-0] 16:08:36.431 INFO f.i.s.r.realtime.InspectBuilds - Refresh all waiting build (nb builds: 0)
[Thread-2] 16:08:36.441 INFO f.i.s.r.r.InspectProcessDuration - The process will finish at: 2022-08-30T08:18:36.432Z
[Thread-1] 16:08:42.238 ERROR f.i.s.r.realtime.JobHelperv2 - Error while getting jobs from V2 API
java.io.IOException: The response answer to https://api.travis-ci.org/jobs is not 200: 500
at fr.inria.jtravis.helpers.AbstractHelper.checkResponse(AbstractHelper.java:84)
at fr.inria.jtravis.helpers.AbstractHelper.get(AbstractHelper.java:100)
at fr.inria.jtravis.helpers.AbstractHelper.get(AbstractHelper.java:123)
at fr.inria.jtravis.helpers.AbstractHelper.get(AbstractHelper.java:123)
at fr.inria.spirals.repairnator.realtime.JobHelperv2.allFromV2(JobHelperv2.java:38)
at fr.inria.spirals.repairnator.realtime.InspectJobs.run(InspectJobs.java:47)
at java.base/java.lang.Thread.run(Thread.java:834)
[Thread-0] 16:08:46.432 INFO f.i.s.r.realtime.InspectBuilds - Refresh all waiting build (nb builds: 0)
[Thread-0] 16:08:56.432 INFO f.i.s.r.realtime.InspectBuilds - Refresh all waiting build (nb builds: 0)
[Thread-1] 16:08:57.504 ERROR f.i.s.r.realtime.JobHelperv2 - Error while getting jobs from V2 API
java.io.IOException: The response answer to https://api.travis-ci.org/jobs is not 200: 500
at fr.inria.jtravis.helpers.AbstractHelper.checkResponse(AbstractHelper.java:84)
at fr.inria.jtravis.helpers.AbstractHelper.get(AbstractHelper.java:100)
at fr.inria.jtravis.helpers.AbstractHelper.get(AbstractHelper.java:123)
at fr.inria.jtravis.helpers.AbstractHelper.get(AbstractHelper.java:123)
at fr.inria.spirals.repairnator.realtime.JobHelperv2.allFromV2(JobHelperv2.java:38)
at fr.inria.spirals.repairnator.realtime.InspectJobs.run(InspectJobs.java:47)
at java.base/java.lang.Thread.run(Thread.java:834)

2. Fail to package:

I ran:

cd src/repairnator-pipeline
mvn clean package

and got the following error:

[ERROR] Failed to execute goal on project repairnator-pipeline: Could not resolve dependencies for project fr.inria.repairnator:repairnator-pipeline:jar:3.3-SNAPSHOT: The following artifacts could not be resolved: eu.stamp-project:assert-fixer:jar:1.0.10, fr.inria.gforge.spirals:npefix:jar:0.8: Could not transfer artifact eu.stamp-project:assert-fixer:jar:1.0.10 from/to tdurieux-maven-repository-release (https://tdurieux.github.io/maven-repository/releases/): peer not authenticated -> [Help 1]

3. Fail to debug the repairnator:

I have now deployed my repair tool into maven repository:

• https://repo1.maven.org/maven2/io/github/dehengyang/mcrepair/
• https://s01.oss.sonatype.org/#nexus-search;quick~mcrepair

It is available by adding the following dependency:

<dependency>
  <groupId>io.github.dehengyang</groupId>
  <artifactId>mcrepair</artifactId>
  <version>1.0</version>
</dependency>

I then try to follow the guide of https://github.com/eclipse/repairnator/blob/master/doc/add-repair-tool.md, but I cannot find the entry point for debugging (i.e., public static void main() method). As debugging may help me understand the project faster, I would much appreciate it if any relevant guidance could be provided.

Thank you in advance for your time and help.

Yours sincerely,
Deheng

[monperrus]

bash launch_rtscanner.sh

The shell scripts are meant for production. For development, it's easier to directly use the Java command-line:

cd src/repairnator-pipeline
mvn exec:java -Dexec.mainClass=fr.inria.spirals.repairnator.pipeline.Launcher -Dexec.args="--buildId=235838150"

I cannot find the entry point for debugging (i.e., public static void main() method)

I would suggest to debug the main method of fr.inria.spirals.repairnator.pipeline.Launcher from your IDE

[sofiabobadilla]

Hi @DehengYang ,
I'm currently working in Repairnator to integrate a new tool, so I have seen some of the bugs you show.
I must warn you that a few docs are deprecated, but we are preparing a new version to add apps.
If you want, I can share the information I have collected so far and help you with the integration.
Feel free to email me at: sofbob@kth.se.
I will be more than happy to help. 😄

[DehengYang]

Dear Prof. Monperrus @monperrus ,
Thank you very much for the prompt help and guidance!

Dear Sofia @Sofi1410 ,
That's really appreciated! I will take a try based on the guidance of Prof. Monperrus and get back here as soon as possible.
Thank you in advance for your great help!