Cxprocs.hoc

// Perform cortex-related computing and simulation routines

objref vClampList_L23
objref vClampList_L4
objref vClampList_L5
objref vClampList_L6

{ load_file("Cx.hoc") }
vClampList_L23 = clampCells(cellLists_L23.o(0))
vClampList_L4 = clampCells(cellLists_L4.o(0))
vClampList_L5 = clampCells(cellLists_L5.o(0))
vClampList_L6 = clampCells(cellLists_L6.o(0))



/*  A procedure for running a simple cortical simulation. */
    proc CxBasic() {localobj data_L23, data_L4, data_L5, data_L6
        if (saveData) {
            data_L23 = dataMultiParallel(cellLists_L23.o(0), vClampList_L23)
            data_L4 = dataMultiParallel(cellLists_L4.o(0), vClampList_L4)
            data_L5 = dataMultiParallel(cellLists_L5.o(0), vClampList_L5)
            data_L6 = dataMultiParallel(cellLists_L6.o(0), vClampList_L6)
        }
        runMain()
        if (saveData) {
            saveMultiParallelCx(data_L23, cellLists_L23.o(0), nodeGidLists_L23.o(0), \
                cellTypeInd_L23, gidLists_L23, gidLists_L23.o(0).min(), 2)
            saveMultiParallelCx(data_L4, cellLists_L4.o(0), nodeGidLists_L4.o(0), \
                cellTypeInd_L4, gidLists_L4, gidLists_L4.o(0).min(), 4)
            saveMultiParallelCx(data_L5, cellLists_L5.o(0), nodeGidLists_L5.o(0), \
                cellTypeInd_L5, gidLists_L5, gidLists_L5.o(0).min(), 5)
            saveMultiParallelCx(data_L6, cellLists_L6.o(0), nodeGidLists_L6.o(0), \
                cellTypeInd_L6, gidLists_L6, gidLists_L6.o(0).min(), 6)
        }
    }







if (runMode == 0) {
    /*gid = gidLists_L5.o(6).x[0]
    if (pc.gid_exists(gid, pc.id)) {
        stim = stimSingle(pc.gid2cell(gid), 0e3, 1e3, -1)
    }*/
    CxBasic()
}