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setup.py
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from setuptools import find_packages, setup
setup(
name="rl_analysis",
packages=find_packages(),
version="1.0.0",
platforms=["mac", "unix"],
description='Python package and notebooks corresponding to "Spontaneous behavior is structured by reinforcement without explicit reward"',
author="wingillis, jmarkow, neurojaym",
license="",
install_requires=[
"black",
"cmocean",
"pandas==1.5.0",
"opencv-python-headless",
"numpy==1.21.5",
"click",
"toolz",
"h5py",
"natsort",
"networkx",
"numexpr==2.8.1",
"dask[complete]<=2022.04.0", # dask is picky
#"dask_jobqueue==0.7.3",
"dask_jobqueue",
"tornado==6.2",
"bokeh<3", # for dask dashboard
"multiprocess",
"tqdm",
"matplotlib",
"seaborn",
"pyarrow",
"numpyro",
"jax",
"optax",
"colorcet",
"toml",
"numba",
"joblib",
"scipy",
"ipywidgets",
"tbb", # makes numba thread-safe
"statsmodels",
"scikit-learn",
],
entry_points={"console_scripts": ["rl-analysis = rl_analysis.cli:cli"]},
)