From 98a655b91af95afde7c5b8f0e997d2b19a6ac9bf Mon Sep 17 00:00:00 2001 From: janer Date: Tue, 3 Jan 2023 08:59:59 -0500 Subject: [PATCH 1/6] Commit changes to replace entity_id with entity_name and get rid of the latter. Still work in progress since views under public_tests are not created. --- db/dot/1-schema.sql | 17 ++--- db/dot/4-upload_sample_dot_data.sql | 26 +++---- docker/appsmith/DOT App V2.json | 2 +- dot/self_tests/unit/test_dbt_logs.py | 2 +- dot/self_tests/unit/test_dbt_logs_safe.py | 2 +- dot/self_tests/unit/test_dot_utils.py | 28 -------- dot/utils/configuration_management.py | 12 ++-- dot/utils/dbt.py | 6 +- dot/utils/dbt_logs.py | 8 +-- dot/utils/great_expectations.py | 9 +-- dot/utils/run_management.py | 3 + dot/utils/utils.py | 86 ++++------------------- 12 files changed, 50 insertions(+), 151 deletions(-) diff --git a/db/dot/1-schema.sql b/db/dot/1-schema.sql index 36bd84b..48c8368 100644 --- a/db/dot/1-schema.sql +++ b/db/dot/1-schema.sql @@ -79,8 +79,7 @@ CREATE TABLE IF NOT EXISTS dot.entity_categories ( CREATE TABLE IF NOT EXISTS dot.configured_entities ( project_id VARCHAR(300) NOT NULL, - entity_id UUID, - entity_name VARCHAR(300), + entity_id VARCHAR(300), entity_category VARCHAR(300), entity_definition VARCHAR(4096), date_added TIMESTAMP WITH TIME ZONE NOT NULL, @@ -104,7 +103,7 @@ CREATE TABLE IF NOT EXISTS dot.configured_tests( description VARCHAR(1000) NOT NULL, impact VARCHAR(1000) NULL, proposed_remediation VARCHAR(1000) NULL, - entity_id UUID NOT NULL references dot.configured_entities on update cascade, + entity_id VARCHAR(300) NOT NULL references dot.configured_entities on update cascade, test_type VARCHAR(300) NOT NULL references dot.test_types on update cascade, column_name VARCHAR(300) NULL, column_description VARCHAR(1000) NULL, @@ -140,7 +139,7 @@ CREATE TABLE IF NOT EXISTS dot.test_results( test_result_id VARCHAR(300) NOT NULL, run_id UUID, test_id UUID references dot.configured_tests on update cascade, - entity_id UUID, + entity_id VARCHAR(300), status TEXT, view_name VARCHAR(300) NULL, id_column_name TEXT, @@ -157,7 +156,7 @@ CREATE TABLE IF NOT EXISTS dot.test_results( CREATE TABLE IF NOT EXISTS dot.test_results_summary ( run_id UUID, test_id UUID references dot.configured_tests on update cascade, - entity_id UUID references dot.configured_entities on update cascade, + entity_id VARCHAR(300) references dot.configured_entities on update cascade, test_type VARCHAR(300) NOT NULL references dot.test_types on update cascade, column_name VARCHAR(300) NULL, test_parameters VARCHAR(1000) NULL, @@ -253,8 +252,6 @@ AS $$ declare KEY_STRING text; BEGIN - KEY_STRING := new.entity_name || new.entity_category || new.entity_definition; - NEW.entity_id := uuid_generate_v3(uuid_ns_oid(), KEY_STRING); new.date_added := NOW(); new.date_modified := NOW(); RETURN NEW; @@ -267,11 +264,9 @@ LANGUAGE plpgsql AS $$ declare KEY_STRING text; - OLD_ENTITY_ID uuid; - NEW_ENTITY_ID uuid; + OLD_ENTITY_ID VARCHAR(300); + NEW_ENTITY_ID VARCHAR(300); BEGIN - KEY_STRING := new.entity_name || new.entity_category || new.entity_definition; - NEW.entity_id := uuid_generate_v3(uuid_ns_oid(), KEY_STRING); new.date_modified := NOW(); RETURN NEW; END; diff --git a/db/dot/4-upload_sample_dot_data.sql b/db/dot/4-upload_sample_dot_data.sql index db0be2d..af5db27 100644 --- a/db/dot/4-upload_sample_dot_data.sql +++ b/db/dot/4-upload_sample_dot_data.sql @@ -6,27 +6,27 @@ INSERT INTO dot.entity_categories VALUES('ZAG', 'Zagreb airport flights'); INSERT INTO dot.entity_categories VALUES('ETH', 'Ethiopian Airlines'); -- configured entities - db views of the data we want to scan -INSERT INTO dot.configured_entities VALUES('ScanProject1','b05f1f9c-2176-46b0-8e8f-d6690f696b9c', 'all_flight_data', 'ALL', '{{ config(materialized=''view'') }} +INSERT INTO dot.configured_entities VALUES('ScanProject1', 'all_flight_data', 'ALL', '{{ config(materialized=''view'') }} {% set schema = %} select * from {{ schema }}.flight_data ','2021-12-07 00:00:00+00','2021-12-07 00:00:00+00','Matt'); -INSERT INTO dot.configured_entities VALUES('ScanProject1','b05f1f9c-2176-46b0-8e8f-d6690f696b9b', 'zagreb_flight_data', 'ZAG', '{{ config(materialized=''view'') }} +INSERT INTO dot.configured_entities VALUES('ScanProject1', 'zagreb_flight_data', 'ZAG', '{{ config(materialized=''view'') }} {% set schema = %} select * from {{ schema }}.flight_data WHERE origin_airport=''Zagreb airport'' ','2021-12-07 00:00:00+00','2021-12-07 00:00:00+00','Matt'); -INSERT INTO dot.configured_entities VALUES('ScanProject1','b05f1f9c-2176-46b0-8e8f-d6690f696b9b', 'ethiopia_airlines_data', 'ETH', '{{ config(materialized=''view'') }} +INSERT INTO dot.configured_entities VALUES('ScanProject1', 'ethiopia_airlines_data', 'ETH', '{{ config(materialized=''view'') }} {% set schema = %} select * from {{ schema }}.flight_data WHERE airline=''Ethiopian Airlines'' ','2021-12-07 00:00:00+00','2021-12-07 00:00:00+00','Matt'); -INSERT INTO dot.configured_entities VALUES('ScanProject1','b05f1f9c-2176-46b0-8e8f-d6690f696b9b', 'all_airports_data', 'ALL', '{{ config(materialized=''view'') }} +INSERT INTO dot.configured_entities VALUES('ScanProject1', 'all_airports_data', 'ALL', '{{ config(materialized=''view'') }} {% set schema = %} select * from {{ schema }}.airport_data ','2021-12-07 00:00:00+00','2021-12-07 00:00:00+00','Matt'); -INSERT INTO dot.configured_entities VALUES('ScanProject1','b05f1f9c-2176-46b0-8e8f-d6690f696b9c', 'airlines_data', 'ALL', '{{ config(materialized=''view'') }} +INSERT INTO dot.configured_entities VALUES('ScanProject1', 'airlines_data', 'ALL', '{{ config(materialized=''view'') }} {% set schema = %} select DISTINCT airline from {{ schema }}.flight_data ','2021-12-07 00:00:00+00','2021-12-07 00:00:00+00','Matt'); @@ -34,38 +34,38 @@ from {{ schema }}.flight_data ','2021-12-07 00:00:00+00','2021-12-07 00:00:00+ -- Note these UUIDs get reset by the trigger INSERT INTO dot.configured_tests VALUES(TRUE, 'ScanProject1', '549c0575-e64c-3605-85a9-70356a23c4d2', 'MISSING-1', 3, -'Origin airport is not null', '', '', 'ca4513fa-96e0-3a95-a1a8-7f0c127ea82a', 'not_null', 'origin_airport', '', +'Origin airport is not null', '', '', 'all_flight_data', 'not_null', 'origin_airport', '', NULL, '2021-12-23 19:00:00.000 -0500', '2021-12-23 19:00:00.000 -0500', 'Matt'); INSERT INTO dot.configured_tests VALUES(TRUE, 'ScanProject1', '8aca2bee-9e95-3f8a-90e9-153714e05367', 'INCONSISTENT-1', -5, 'Price is not negative', '', '', 'ca4513fa-96e0-3a95-a1a8-7f0c127ea82a', 'not_negative_string_column', 'price', '', +5, 'Price is not negative', '', '', 'all_flight_data', 'not_negative_string_column', 'price', '', '{"name": "price"}', '2021-12-23 19:00:00.000 -0500', '2021-12-23 19:00:00.000 -0500', 'Matt'); INSERT INTO dot.configured_tests VALUES(TRUE, 'ScanProject1', '52d7352e-56ee-3084-9c67-e5ab24afc3a3', 'DUPLICATE-1', -3, 'Airport not unique', '', '', '7b689796-afde-3930-87be-ed8b7c7a0474', 'unique', 'airport', '', NULL, +3, 'Airport not unique', '', '', 'all_airports_data', 'unique', 'airport', '', NULL, '2021-12-23 19:00:00.000 -0500', '2021-12-23 19:00:00.000 -0500', 'Matt'); INSERT INTO dot.configured_tests VALUES(TRUE, 'ScanProject1', '935e6b61-b664-3eab-9d67-97c2c9c2bec0', 'INCONSISTENT-1', -3, 'Disallowed FP methods entered in form', '', '', 'ca4513fa-96e0-3a95-a1a8-7f0c127ea82a', 'accepted_values', 'stops', +3, 'Disallowed FP methods entered in form', '', '', 'all_flight_data', 'accepted_values', 'stops', '', $${"values": [ "1", "2", "3", "Non-stop"]}$$, '2021-12-23 19:00:00.000 -0500', '2021-12-23 19:00:00.000 -0500', 'Matt'); INSERT INTO dot.configured_tests VALUES(TRUE, 'ScanProject1', '0cdc9702-91e0-3499-b6f0-4dec12ad0f08', 'ASSESS-1', 3, -'Flight with no airport record', '', '', 'ca4513fa-96e0-3a95-a1a8-7f0c127ea82a', 'relationships', 'origin_airport', +'Flight with no airport record', '', '', 'all_flight_data', 'relationships', 'origin_airport', '', $${"name": "flight_with_no_airport", "to": "ref('dot_model__all_airports_data')", "field": "airport"}$$, '2021-12-23 19:00:00.000 -0500', '2021-12-23 19:00:00.000 -0500', 'Matt'); INSERT INTO dot.configured_tests VALUES(TRUE, 'ScanProject1', '0cdc9702-91e0-3499-b6f0-4dec12ad0f18', 'BIAS-1', 6, -'Price outlier airlines', '', '', 'ca4513fa-96e0-3a95-a1a8-7f0c127ea82a', 'expect_similar_means_across_reporters', +'Price outlier airlines', '', '', 'all_flight_data', 'expect_similar_means_across_reporters', 'price', '', $${"key": "airline","quantity": "price","data_table": "dot_model__all_flight_data","id_column": "airline", "target_table":"dot_model__airlines_data"}$$, '2022-01-19 20:00:00.000 -0500', '2022-01-19 20:00:00.000 -0500', 'Matt'); INSERT INTO dot.configured_tests VALUES(TRUE, 'ScanProject1', '36d33837-bd92-370a-963a-264a4d5b2bac', 'DUPLICATE-1', -6, 'Duplicate flight record', '', '', 'ca4513fa-96e0-3a95-a1a8-7f0c127ea82a', 'possible_duplicate_forms', '', '', +6, 'Duplicate flight record', '', '', 'all_flight_data', 'possible_duplicate_forms', '', '', $${"table_specific_reported_date": "departure_time", "table_specific_patient_uuid": "airline", "table_specific_uuid": "uuid", "table_specific_period": "day"}$$, '2021-12-23 19:00:00.000 -0500', '2022-03-21 19:00:00.000 -0500', 'Matt'); INSERT INTO dot.configured_tests VALUES(TRUE, 'ScanProject1', 'c4a3da8f-32f4-4e9b-b135-354de203ca90', 'TREAT-1', -5, 'Number of stops has a reasonible value', '', '', 'ca4513fa-96e0-3a95-a1a8-7f0c127ea82a', 'custom_sql', '', '', +5, 'Number of stops has a reasonible value', '', '', 'all_flight_data', 'custom_sql', '', '', format('{%s: %s}', to_json('query'::text), to_json($query$ diff --git a/docker/appsmith/DOT App V2.json b/docker/appsmith/DOT App V2.json index 5d4b790..a0b7fab 100644 --- a/docker/appsmith/DOT App V2.json +++ b/docker/appsmith/DOT App V2.json @@ -1 +1 @@ -{"clientSchemaVersion":1.0,"serverSchemaVersion":6.0,"exportedApplication":{"name":"Data Observation Toolkit","isPublic":true,"pages":[{"id":"Run log","isDefault":true},{"id":"Run results","isDefault":false},{"id":"Failed 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Each run of DOT will test data for a given project. Typically a project relates to a database where the data is, but it can also be a useful way to split DOT runs into different data groups.

\n\n

Project fields

\n\n\n\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\n\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\n
FieldDescriptionExample
project_idIdentifier for the projectballroom_dancing
activeFlag to indicate if the project is active for scanning. Useful for quickly activating/deactivating all tests for a given project✓
descriptionMore details for the project\n\t\t\t

This project tests data as gathered by the ballroom dancing monitoring initiative

\n\t\t\t
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Each run of DOT will test data for a given project. Typically a project relates to a database where the data is, but it can also be a useful way to split DOT runs into different data groups.

\n\n

Project fields

\n\n\n\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\n\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\n
FieldDescriptionExample
project_idIdentifier for the projectballroom_dancing
activeFlag to indicate if the project is active for scanning. Useful for quickly activating/deactivating all tests for a given project✓
descriptionMore details for the project\n\t\t\t

This project tests data as gathered by the ballroom dancing monitoring initiative

\n\t\t\t
\n\n

 

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Entities are database views which contain the data DOT will test. You provide the SQL for these views and DOT will generate them automatically. Typically each view is a select statement onto an underlying database table or view, but you can also use SQL to combine data from multiple objects.

\n\n

Entity fields

\n\n\n\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\n\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\n
FieldDescriptionExample
entity_nameEntity namefandango_events
entity_categoryEntity category, using categories defined in DOT categoriesflamenco_dance
entity_definitionThe SQL statement which gets the data DOT will scan\n\t\t\t

SELECT * from dance_events where type = 'flamenco' 

\n\t\t\t
\n\n

 

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Entities are database views which contain the data DOT will test. You provide the SQL for these views and DOT will generate them automatically. Typically each view is a select statement onto an underlying database table or view, but you can also use SQL to combine data from multiple objects.

\n\n

Entity fields

\n\n\n\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\n\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\n
FieldDescriptionExample
entity_nameEntity namefandango_events
entity_categoryEntity category, using categories defined in DOT categoriesflamenco_dance
entity_definitionThe SQL statement which gets the data DOT will scan\n\t\t\t

SELECT * from dance_events where type = 'flamenco' 

\n\t\t\t
\n\n

 

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The entities (database views) that contain the data DOT will test, can be assigned categories. This is useful for analysis and dashboards as test results can be shown by category.

\n\n

Category fields

\n\n\n\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\n\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\n
FieldDescriptionExample
entity_categoryCategoryflamenco_dance
descriptionMore details for the category\n\t\t\t

Data for dancing which originate from flamenco

\n\t\t\t
\n\n

 

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The entities (database views) that contain the data DOT will test, can be assigned categories. This is useful for analysis and dashboards as test results can be shown by category.

\n\n

Category fields

\n\n\n\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\n\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\n
FieldDescriptionExample
entity_categoryCategoryflamenco_dance
descriptionMore details for the category\n\t\t\t

Data for dancing which originate from flamenco

\n\t\t\t
\n\n

 

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The tests DOT will run are defined here.  

\n\n

Test fields

\n\n\n\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\n\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\n
FieldDescriptionExample
test_activatedA toggle to turn a tests on/off without having to delete them.✓
project_idThe project, as defined under 'Projects'\n\t\t\t

ballroom_dancing

\n\t\t\t
descriptionDescription for the testTest that dancing shoes type is not null
priorityPriority of the test (1-10) where 1 indicates test fails of this test need urgent attention. Useful for dashboarding3
entityThe entity (database view as defined under 'Entities') that the test will run againstfandango_events
test_typeType of tests DOT performs. You will be prompted from a drop-down to set thisnot_null
column_nameColumn name a test should apply. Note, this isn't mandatory for all test typesdancing_shoes
test_parametersJSON record defining parameters for the test\n\t\t\t

{

\n\n\t\t\t

    form_name: 'dance_survey'

\n\n\t\t\t

}

\n\t\t\t
scenario_idInconsistent or Problematic (IoP) data scenario. You will be prompted from a drop-down to set this. These scenarios can be modified/extended by updating the data in the dot.scenarios tableINCONSISTENT-1
proposed_remediationOptional field to indicate remediation for tests that failEscalate to dance development team
\n\n

 

\n\n

Bulk Activating/Deactivating tests

\n\n

As well as activating and deactivating tests by editing individual tests, you can also bulk-select tests using the radio button on the far-left of the table, then clicking the 'Activate/Deactivate' button above the table.
\n
\nBulk Deletion of tests

\n\n

Similar to bulk activation/deactivation, you can select multiple tests and delete them by clicking the 'Delete tests' button above the table.

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The tests DOT will run are defined here.  

\n\n

Test fields

\n\n\n\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\n\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\n
FieldDescriptionExample
test_activatedA toggle to turn a tests on/off without having to delete them.✓
project_idThe project, as defined under 'Projects'\n\t\t\t

ballroom_dancing

\n\t\t\t
descriptionDescription for the testTest that dancing shoes type is not null
priorityPriority of the test (1-10) where 1 indicates test fails of this test need urgent attention. Useful for dashboarding3
entityThe entity (database view as defined under 'Entities') that the test will run againstfandango_events
test_typeType of tests DOT performs. You will be prompted from a drop-down to set thisnot_null
column_nameColumn name a test should apply. Note, this isn't mandatory for all test typesdancing_shoes
test_parametersJSON record defining parameters for the test\n\t\t\t

{

\n\n\t\t\t

    form_name: 'dance_survey'

\n\n\t\t\t

}

\n\t\t\t
scenario_idInconsistent or Problematic (IoP) data scenario. You will be prompted from a drop-down to set this. These scenarios can be modified/extended by updating the data in the dot.scenarios tableINCONSISTENT-1
proposed_remediationOptional field to indicate remediation for tests that failEscalate to dance development team
\n\n

 

\n\n

Bulk Activating/Deactivating tests

\n\n

As well as activating and deactivating tests by editing individual tests, you can also bulk-select tests using the radio button on the far-left of the table, then clicking the 'Activate/Deactivate' button above the table.
\n
\nBulk Deletion of tests

\n\n

Similar to bulk activation/deactivation, you can select multiple tests and delete them by clicking the 'Delete tests' button above the table.

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Each run of DOT will test data for a given project. Typically a project relates to a database where the data is, but it can also be a useful way to split DOT runs into different data groups.

\n\n

Project fields

\n\n\n\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\n\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\n
FieldDescriptionExample
project_idIdentifier for the projectballroom_dancing
activeFlag to indicate if the project is active for scanning. Useful for quickly activating/deactivating all tests for a given project✓
descriptionMore details for the project\n\t\t\t

This project tests data as gathered by the ballroom dancing monitoring initiative

\n\t\t\t
\n\n

 

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Each run of DOT will test data for a given project. Typically a project relates to a database where the data is, but it can also be a useful way to split DOT runs into different data groups.

\n\n

Project fields

\n\n\n\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\n\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\n
FieldDescriptionExample
project_idIdentifier for the projectballroom_dancing
activeFlag to indicate if the project is active for scanning. Useful for quickly activating/deactivating all tests for a given project✓
descriptionMore details for the project\n\t\t\t

This project tests data as gathered by the ballroom dancing monitoring initiative

\n\t\t\t
\n\n

 

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Entities are database views which contain the data DOT will test. You provide the SQL for these views and DOT will generate them automatically. Typically each view is a select statement onto an underlying database table or view, but you can also use SQL to combine data from multiple objects.

\n\n

Entity fields

\n\n\n\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\n\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\n
FieldDescriptionExample
entity_idEntity namefandango_events
entity_categoryEntity category, using categories defined in DOT categoriesflamenco_dance
entity_definitionThe SQL statement which gets the data DOT will scan\n\t\t\t

SELECT * from dance_events where type = 'flamenco' 

\n\t\t\t
\n\n

 

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Entities are database views which contain the data DOT will test. You provide the SQL for these views and DOT will generate them automatically. Typically each view is a select statement onto an underlying database table or view, but you can also use SQL to combine data from multiple objects.

\n\n

Entity fields

\n\n\n\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\n\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\n
FieldDescriptionExample
entity_idEntity namefandango_events
entity_categoryEntity category, using categories defined in DOT categoriesflamenco_dance
entity_definitionThe SQL statement which gets the data DOT will scan\n\t\t\t

SELECT * from dance_events where type = 'flamenco' 

\n\t\t\t
\n\n

 

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The entities (database views) that contain the data DOT will test, can be assigned categories. This is useful for analysis and dashboards as test results can be shown by category.

\n\n

Category fields

\n\n\n\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\n\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\n
FieldDescriptionExample
entity_categoryCategoryflamenco_dance
descriptionMore details for the category\n\t\t\t

Data for dancing which originate from flamenco

\n\t\t\t
\n\n

 

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The entities (database views) that contain the data DOT will test, can be assigned categories. This is useful for analysis and dashboards as test results can be shown by category.

\n\n

Category fields

\n\n\n\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\n\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\n
FieldDescriptionExample
entity_categoryCategoryflamenco_dance
descriptionMore details for the category\n\t\t\t

Data for dancing which originate from flamenco

\n\t\t\t
\n\n

 

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The tests DOT will run are defined here.  

\n\n

Test fields

\n\n\n\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\n\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\n
FieldDescriptionExample
test_activatedA toggle to turn a tests on/off without having to delete them.✓
project_idThe project, as defined under 'Projects'\n\t\t\t

ballroom_dancing

\n\t\t\t
descriptionDescription for the testTest that dancing shoes type is not null
priorityPriority of the test (1-10) where 1 indicates test fails of this test need urgent attention. Useful for dashboarding3
entityThe entity (database view as defined under 'Entities') that the test will run againstfandango_events
test_typeType of tests DOT performs. You will be prompted from a drop-down to set thisnot_null
column_nameColumn name a test should apply. Note, this isn't mandatory for all test typesdancing_shoes
test_parametersJSON record defining parameters for the test\n\t\t\t

{

\n\n\t\t\t

    form_name: 'dance_survey'

\n\n\t\t\t

}

\n\t\t\t
scenario_idInconsistent or Problematic (IoP) data scenario. You will be prompted from a drop-down to set this. These scenarios can be modified/extended by updating the data in the dot.scenarios tableINCONSISTENT-1
proposed_remediationOptional field to indicate remediation for tests that failEscalate to dance development team
\n\n

 

\n\n

Bulk Activating/Deactivating tests

\n\n

As well as activating and deactivating tests by editing individual tests, you can also bulk-select tests using the radio button on the far-left of the table, then clicking the 'Activate/Deactivate' button above the table.
\n
\nBulk Deletion of tests

\n\n

Similar to bulk activation/deactivation, you can select multiple tests and delete them by clicking the 'Delete tests' button above the table.

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The tests DOT will run are defined here.  

\n\n

Test fields

\n\n\n\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\n\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\n\t\n
FieldDescriptionExample
test_activatedA toggle to turn a tests on/off without having to delete them.✓
project_idThe project, as defined under 'Projects'\n\t\t\t

ballroom_dancing

\n\t\t\t
descriptionDescription for the testTest that dancing shoes type is not null
priorityPriority of the test (1-10) where 1 indicates test fails of this test need urgent attention. Useful for dashboarding3
entityThe entity (database view as defined under 'Entities') that the test will run againstfandango_events
test_typeType of tests DOT performs. You will be prompted from a drop-down to set thisnot_null
column_nameColumn name a test should apply. Note, this isn't mandatory for all test typesdancing_shoes
test_parametersJSON record defining parameters for the test\n\t\t\t

{

\n\n\t\t\t

    form_name: 'dance_survey'

\n\n\t\t\t

}

\n\t\t\t
scenario_idInconsistent or Problematic (IoP) data scenario. You will be prompted from a drop-down to set this. These scenarios can be modified/extended by updating the data in the dot.scenarios tableINCONSISTENT-1
proposed_remediationOptional field to indicate remediation for tests that failEscalate to dance development team
\n\n

 

\n\n

Bulk Activating/Deactivating tests

\n\n

As well as activating and deactivating tests by editing individual tests, you can also bulk-select tests using the radio button on the far-left of the table, then clicking the 'Activate/Deactivate' button above the table.
\n
\nBulk Deletion of tests

\n\n

Similar to bulk activation/deactivation, you can select multiple tests and delete them by clicking the 'Delete tests' button above the table.

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' ' : params[0].description;\n return tooltip;\n}"],"userSetOnLoad":false,"confirmBeforeExecute":false,"policies":[],"userPermissions":[]},"id":"Tests_JSFunctions.getTestParameterDescription","deleted":false,"gitSyncId":"62c4319bfa65ed18bbd7c88a_62c4ccb38b0ebe338ec57994"},{"pluginType":"DB","pluginId":"postgres-plugin","unpublishedAction":{"name":"Test_Parameters_Cache","datasource":{"name":"dot_db_local","pluginId":"postgres-plugin","messages":[],"isAutoGenerated":false,"id":"dot_db_local","deleted":false,"policies":[],"userPermissions":[]},"pageId":"Tests","actionConfiguration":{"timeoutInMillisecond":10000.0,"paginationType":"NONE","encodeParamsToggle":true,"body":"select * from dot.test_parameters_interface","pluginSpecifiedTemplates":[{"value":true}]},"executeOnLoad":true,"dynamicBindingPathList":[],"isValid":true,"invalids":[],"messages":[],"jsonPathKeys":[],"userSetOnLoad":false,"confirmBeforeExecute":false,"policies":[],"userPermissions":[]},"publishedAction":{"name":"Test_Parameters_Cache","datasource":{"name":"dot_db_local","pluginId":"postgres-plugin","messages":[],"isAutoGenerated":false,"id":"dot_db_local","deleted":false,"policies":[],"userPermissions":[]},"pageId":"Tests","actionConfiguration":{"timeoutInMillisecond":10000.0,"paginationType":"NONE","encodeParamsToggle":true,"body":"select * from dot.test_parameters_interface","pluginSpecifiedTemplates":[{"value":true}]},"executeOnLoad":true,"dynamicBindingPathList":[],"isValid":true,"invalids":[],"messages":[],"jsonPathKeys":[],"userSetOnLoad":false,"confirmBeforeExecute":false,"policies":[],"userPermissions":[]},"id":"Tests_Test_Parameters_Cache","deleted":false,"gitSyncId":"62c4319bfa65ed18bbd7c88a_62c4cc7e8b0ebe338ec57992"}],"actionCollectionList":[{"unpublishedCollection":{"name":"JSFunctions","pageId":"Tests","pluginId":"js-plugin","pluginType":"JS","actions":[],"archivedActions":[],"body":"export default {\n\tallowUpdate: () => !!configured_tests.selectedRows.length,\n\tgetIds: () => {\n\t\treturn `(${configured_tests.selectedRows.map(item => `\\'${item.test_id}\\'`).join(\", \")})`\n\t},\n\tbulkUpdate: () => {\n\t\tlet test_activated_b = test_activated_bulk.isChecked;\n\t\tBulk_Update_Test_Activated.run(() => {\n\t\t\tshowAlert('Successfully updated test activation status');\n\t\t\tcloseModal('Activate_Tests_Modal');\n\t\t\tresetWidget('test_activated_bulk');\n\t\t\tConfigured_tests_data.run();\n\t\t}, () => {}, {'test_activated_bulk': test_activated_b, 'test_ids': this.getIds()});\n\t},\n\tbulkDelete: () => {\n\t\tBulk_Delete_Tests.run(() => {\n\t\t\tshowAlert('Successfully deleted tests');\n\t\t\tcloseModal('Delete_Tests_Modal');\n\t\t\tConfigured_tests_data.run();\n\t\t}, () => {}, {'test_ids': this.getIds()});\n\t},\n\t// Flag to say if a test_type uses test_parameters in configured_tests\n\ttestUsesParameters: (test_type_in) => {\n\t\tconst test_types = Test_Types_That_Use_Parameters.data.map(item => { return item.test_type;});\n\t\treturn test_types.includes(test_type_in);\n\t},\n\t// Flag to say if a test_type uses columns in configured_tests\n\ttestUsesColumn: (test_type_in) => {\n\t\tconst test_types = Test_Types_That_Use_Column.data.map(item => { return item.test_type;});\n\t\treturn test_types.includes(test_type_in);\n\t},\n\tparamIsVisible: (test_type_in, param_in) => {\n\t\tconst params = Test_Parameters.data.map(item => { return item.test_type == test_type_in ? item.parameter : undefined;});\n\t\treturn params.includes(param_in);\n\t},\n\tgetEntityColumns: (project_id_in, entity_id_in, entity_id_in, data_type_in) => { \n\t\t//project_id_in = 'Brac';\n\t\t//entity_id_in = 'ancview_pregnancy';\n\t\t// JSON forms don't allow us to access selected label, unlike regular forms, so we need tor strip out artifacts\n\t\t// TODO Refactor test_parameters to lose dbt artifacts like ref('')\n\t\tentity_id_in = entity_id_in == undefined ? undefined : entity_id_in.replace(\"ref('dot_model__\",\"\").replace(\"')\",\"\");\n\t\t// Filter and subset\n\t\tvar columns = Entity_column_names_cache.data.filter(function (el) {\n \t\treturn (el.entity_id == entity_id_in || entity_id_in == undefined) &&\n\t\t\t\t (el.entity_id == entity_id_in || entity_id_in == undefined) &&\n\t\t\t\t (el.project_id == project_id_in || project_id_in == undefined) &&\n\t\t\t\t (el.data_type == data_type_in || data_type_in == undefined);\n\t\t}).map( ({label, value}) => ({label, value} ) );\n\t\treturn columns;\n\t},\n\tgetTestParameterDescription: (test_parameter_in) => { \n\t\t//test_parameter_in = 'values';\n\t\t// Filter \n\t\tvar params = Test_Parameters_Cache.data.filter(function (el) {\n \t\treturn el.parameter == test_parameter_in;\n\t\t});\n\t\tvar tooltip = params.length == 0 ? ' ' : params[0].description;\n\t\treturn tooltip;\n\t},\n\tgetTestParameterExample: (test_parameter_in) => { \n\t\tvar params = Test_Parameters_Cache.data.filter(function (el) {\n \t\treturn el.parameter == test_parameter_in;\n\t\t});\n\t\tvar example = params.length == 0 ? ' ' : params[0].example;\n\t\treturn example;\n\t},\n\tgetTestTypeDescription: (test_type_in) => { \n\t\t// Filter \n\t\tvar params = Test_Types_Cache.data.filter(function (el) {\n \t\treturn el.test_type == test_type_in;\n\t\t});\n\t\tvar tooltip = params.length == 0 ? ' ' : params[0].description;\n\t\treturn tooltip;\n\t}\n}","variables":[]},"publishedCollection":{"name":"JSFunctions","pageId":"Tests","pluginId":"js-plugin","pluginType":"JS","actions":[],"archivedActions":[],"body":"export default {\n\tallowUpdate: () => !!configured_tests.selectedRows.length,\n\tgetIds: () => {\n\t\treturn `(${configured_tests.selectedRows.map(item => `\\'${item.test_id}\\'`).join(\", \")})`\n\t},\n\tbulkUpdate: () => {\n\t\tlet test_activated_b = test_activated_bulk.isChecked;\n\t\tBulk_Update_Test_Activated.run(() => {\n\t\t\tshowAlert('Successfully updated test activation status');\n\t\t\tcloseModal('Activate_Tests_Modal');\n\t\t\tresetWidget('test_activated_bulk');\n\t\t\tConfigured_tests_data.run();\n\t\t}, () => {}, {'test_activated_bulk': test_activated_b, 'test_ids': this.getIds()});\n\t},\n\tbulkDelete: () => {\n\t\tBulk_Delete_Tests.run(() => {\n\t\t\tshowAlert('Successfully deleted tests');\n\t\t\tcloseModal('Delete_Tests_Modal');\n\t\t\tConfigured_tests_data.run();\n\t\t}, () => {}, {'test_ids': this.getIds()});\n\t},\n\t// Flag to say if a test_type uses test_parameters in configured_tests\n\ttestUsesParameters: (test_type_in) => {\n\t\tconst test_types = Test_Types_That_Use_Parameters.data.map(item => { return item.test_type;});\n\t\treturn test_types.includes(test_type_in);\n\t},\n\t// Flag to say if a test_type uses columns in configured_tests\n\ttestUsesColumn: (test_type_in) => {\n\t\tconst test_types = Test_Types_That_Use_Column.data.map(item => { return item.test_type;});\n\t\treturn test_types.includes(test_type_in);\n\t},\n\tparamIsVisible: (test_type_in, param_in) => {\n\t\tconst params = Test_Parameters.data.map(item => { return item.test_type == test_type_in ? item.parameter : undefined;});\n\t\treturn params.includes(param_in);\n\t},\n\tgetEntityColumns: (project_id_in, entity_id_in, entity_id_in, data_type_in) => { \n\t\t//project_id_in = 'Brac';\n\t\t//entity_id_in = 'ancview_pregnancy';\n\t\t// JSON forms don't allow us to access selected label, unlike regular forms, so we need tor strip out artifacts\n\t\t// TODO Refactor test_parameters to lose dbt artifacts like ref('')\n\t\tentity_id_in = entity_id_in == undefined ? undefined : entity_id_in.replace(\"ref('dot_model__\",\"\").replace(\"')\",\"\");\n\t\t// Filter and subset\n\t\tvar columns = Entity_column_names_cache.data.filter(function (el) {\n \t\treturn (el.entity_id == entity_id_in || entity_id_in == undefined) &&\n\t\t\t\t (el.entity_id == entity_id_in || entity_id_in == undefined) &&\n\t\t\t\t (el.project_id == project_id_in || project_id_in == undefined) &&\n\t\t\t\t (el.data_type == data_type_in || data_type_in == undefined);\n\t\t}).map( ({label, value}) => ({label, value} ) );\n\t\treturn columns;\n\t},\n\tgetTestParameterDescription: (test_parameter_in) => { \n\t\t//test_parameter_in = 'values';\n\t\t// Filter \n\t\tvar params = Test_Parameters_Cache.data.filter(function (el) {\n \t\treturn el.parameter == test_parameter_in;\n\t\t});\n\t\tvar tooltip = params.length == 0 ? ' ' : params[0].description;\n\t\treturn tooltip;\n\t},\n\tgetTestParameterExample: (test_parameter_in) => { \n\t\tvar params = Test_Parameters_Cache.data.filter(function (el) {\n \t\treturn el.parameter == test_parameter_in;\n\t\t});\n\t\tvar example = params.length == 0 ? ' ' : params[0].example;\n\t\treturn example;\n\t},\n\tgetTestTypeDescription: (test_type_in) => { \n\t\t// Filter \n\t\tvar params = Test_Types_Cache.data.filter(function (el) {\n \t\treturn el.test_type == test_type_in;\n\t\t});\n\t\tvar tooltip = params.length == 0 ? 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entity_name="dot_model__all_flight_data", + entity_id="dot_model__all_flight_data", test_parameters="{}", short_test_name="tr_dot_model__all_flight_data_not_null_origin_a", ) diff --git a/dot/self_tests/unit/test_dbt_logs_safe.py b/dot/self_tests/unit/test_dbt_logs_safe.py index 7ff394e..1c86ee9 100644 --- a/dot/self_tests/unit/test_dbt_logs_safe.py +++ b/dot/self_tests/unit/test_dbt_logs_safe.py @@ -105,7 +105,7 @@ def test_process_dbt_logs_row_safe(self): test_status="fail", test_message="got 1 result, configured to fail if != 0", column_name="price", - entity_name="dot_model__all_flight_data", + entity_id="dot_model__all_flight_data", test_parameters="{'name': 'price'}", short_test_name="tr_dot_model__all_flight_data_price", ) diff --git a/dot/self_tests/unit/test_dot_utils.py b/dot/self_tests/unit/test_dot_utils.py index d36cb93..71225e6 100644 --- a/dot/self_tests/unit/test_dot_utils.py +++ b/dot/self_tests/unit/test_dot_utils.py @@ -13,8 +13,6 @@ from utils.utils import ( # pylint: disable=wrong-import-order get_test_id, get_configured_tests_row, - get_entity_id_from_name, - get_entity_name_from_id, get_test_rows, setup_custom_logger, save_tests_to_db, @@ -254,32 +252,6 @@ def test_get_configured_tests_row( f"difference in {k}; {v} vs {configured_tests_row[k]}", ) - @patch("utils.configuration_utils._get_filename_safely") - def test_get_entity_id_from_name( - self, mock_get_filename_safely - ): # pylint: disable=no-value-for-parameter - """test for get_entity_id_from_name""" - mock_get_filename_safely.side_effect = self.mock_get_filename_safely - - self.assertEqual( - "ca4513fa-96e0-3a95-a1a8-7f0c127ea82a", - get_entity_id_from_name("ScanProject1", "dot_model__all_flight_data"), - ) - - @patch("utils.configuration_utils._get_filename_safely") - def test_get_entity_name_from_id( - self, mock_get_filename_safely - ): # pylint: disable=no-value-for-parameter - """test for get_entity_name_from_id""" - mock_get_filename_safely.side_effect = self.mock_get_filename_safely - - self.assertEqual( - "dot_model__all_flight_data", - get_entity_name_from_id( - "ScanProject1", "ca4513fa-96e0-3a95-a1a8-7f0c127ea82a" - ), - ) - @patch("utils.configuration_utils._get_filename_safely") def test_get_test_rows( self, mock_get_filename_safely diff --git a/dot/utils/configuration_management.py b/dot/utils/configuration_management.py index 8c20723..4b8b258 100644 --- a/dot/utils/configuration_management.py +++ b/dot/utils/configuration_management.py @@ -23,7 +23,6 @@ load_config_file, ) from utils.dbt import create_core_entities -from utils.utils import get_entity_name_from_id # %% @@ -319,11 +318,10 @@ def generate_tests_from_db(project_id, logger=logging.Logger): # Parse schema tests to generate yaml format logger.info("Generating schema DBT test files ...") for entity_id in dbt_schema_tests["entity_id"].unique(): - entity_name = get_entity_name_from_id(project_id, entity_id) if ( - entity_name not in config_options.keys() + entity_id not in config_options.keys() ): # pylint: disable=consider-iterating-dictionary - config_options[entity_id] = {"name": entity_name, "columns": {}} + config_options[entity_id] = {"name": entity_id, "columns": {}} # Loop through tests for this entity df = dbt_schema_tests.loc[dot_tests["entity_id"] == entity_id] @@ -388,8 +386,7 @@ def generate_tests_from_db(project_id, logger=logging.Logger): yaml_content = yaml.safe_dump( cfg, default_flow_style=False, sort_keys=False, indent=4 ) - entity_name = get_entity_name_from_id(project_id, entity_id) - output_file = model_dir + "/" + entity_name + ".yml" + output_file = model_dir + "/" + entity_id + ".yml" logger.info("Writing schema test file: " + output_file) with open(output_file, "w") as f: f.write(yaml_content) @@ -407,8 +404,7 @@ def generate_tests_from_db(project_id, logger=logging.Logger): df = dbt_non_schema_tests.loc[dot_tests["entity_id"] == entity_id] for index, row in df.iterrows(): custom_sql = row["test_parameters"]["query"] - entity_name = get_entity_name_from_id(project_id, entity_id) - output_file = tests_dir + "/" + entity_name + "_id" + str(index) + ".sql" + output_file = tests_dir + "/" + entity_id + "_id" + str(index) + ".sql" logger.info("Writing custom sql test file: " + output_file) with open(output_file, "w") as f: f.write(custom_sql) diff --git a/dot/utils/dbt.py b/dot/utils/dbt.py index 88f0013..0f62eda 100644 --- a/dot/utils/dbt.py +++ b/dot/utils/dbt.py @@ -12,7 +12,6 @@ get_short_test_name, get_configured_tests_row, run_sub_process, - get_entity_id_from_name, dot_model_PREFIX, ) from utils.connection_utils import get_db_params_from_config @@ -254,8 +253,7 @@ def extract_df_from_dbt_test_results_json( dbt_tests_summary = {} for row in dbt_results: processed_row = process_dbt_logs_row(row) - - entity_id = get_entity_id_from_name(project_id, processed_row.entity_name) + entity_id = processed_row.entity_id configured_test_row = get_configured_tests_row( processed_row.test_type, entity_id, @@ -341,7 +339,7 @@ def create_core_entities( for i, row in configured_entities.iterrows(): filename = os.path.join( - output_path, f"{dot_model_PREFIX}{row['entity_name']}.sql" + output_path, f"{dot_model_PREFIX}{row['entity_id']}.sql" ) logger.info(f"Writing core entity file: {filename}") with open(filename, "w") as f: diff --git a/dot/utils/dbt_logs.py b/dot/utils/dbt_logs.py index 4cdf7d8..e302937 100644 --- a/dot/utils/dbt_logs.py +++ b/dot/utils/dbt_logs.py @@ -19,7 +19,7 @@ class DbtOutputProcessedRow: test_status: str test_message: str column_name: str - entity_name: str + entity_id: str test_parameters: str short_test_name: str @@ -138,12 +138,12 @@ def process_dbt_logs_row(row: dict) -> dict: test_message = row["message"].lower() if row["message"] else "" column_name = node.get("column_name") - entity_name = node["original_file_path"].split("/")[-1].split(".")[0] + entity_id = node["original_file_path"].split("/")[-1].split(".")[0] test_parameters = _get_test_parameters(node, test_type) # For custom sql tests the view name has "id_XX" at the end, needs to be stripped - entity_name = entity_name.split("_id")[0] + entity_id = entity_id.split("_id")[0] _, short_test_name = get_short_test_name(node) @@ -153,7 +153,7 @@ def process_dbt_logs_row(row: dict) -> dict: test_status, test_message, column_name, - entity_name, + entity_id, test_parameters, short_test_name, ) diff --git a/dot/utils/great_expectations.py b/dot/utils/great_expectations.py index d728fa1..61baa2c 100644 --- a/dot/utils/great_expectations.py +++ b/dot/utils/great_expectations.py @@ -6,7 +6,7 @@ import pandas as pd import yaml -from utils.utils import get_test_id, get_entity_id_from_name +from utils.utils import get_test_id from utils.connection_utils import ( update_db_config_from_os, get_db_params_from_config, @@ -268,16 +268,13 @@ def extract_df_from_ge_test_results_csv(run_id, project_id, logger): columns={"expectation_config.expectation_type": "test_type"}, inplace=True ) ge_tests_summary.rename( - columns={"expectation_config.kwargs.data_table": "entity"}, inplace=True + columns={"expectation_config.kwargs.data_table": "entity_id"}, inplace=True ) ge_tests_summary.rename( columns={"exception_info.exception_message": "test_status_message"}, inplace=True, ) - ge_tests_summary["entity_id"] = ge_tests_summary.apply( - lambda x: get_entity_id_from_name(project_id, x["entity"]), - axis=1, - ) + ge_tests_summary["test_id"] = ge_tests_summary.apply( lambda x: get_test_id( x["test_type"], diff --git a/dot/utils/run_management.py b/dot/utils/run_management.py index c9fa2de..57caf7d 100644 --- a/dot/utils/run_management.py +++ b/dot/utils/run_management.py @@ -175,6 +175,9 @@ def run_dot_tests(project_id, logger, run_id): logger.info("Running tests for project_id: %s", project_id) # Run the dot_pipeline + print('\n\n\n') + print(project_id, logger, run_id) + print('\n\n\n') run_dot_stages(project_id, logger, run_id) # If no errors occur updates SQL table to say completed diff --git a/dot/utils/utils.py b/dot/utils/utils.py index ed6c092..db69487 100644 --- a/dot/utils/utils.py +++ b/dot/utils/utils.py @@ -152,7 +152,7 @@ def get_short_test_name(node: dict) -> Tuple[str, str]: ) if word_to_shorten > 1: short_test_name = "_".join( - [short_test_name] + test_name_pieces[-word_to_shorten + 1 :] + [short_test_name] + test_name_pieces[-word_to_shorten + 1:] ) return test_name, short_test_name @@ -316,7 +316,6 @@ def generate_row_results_df( id_column_values: list, run_id: str, test_id: str, - entity_name: str, entity_id: str, status: str, view_name: str, @@ -333,9 +332,6 @@ def generate_row_results_df( ID of the current run, as found in dot.run_status test_id: str ID of the tests, as found in dot.configured_tests - entity_name: str - Entity view of data tested, or the name of the primary table for custom - sql tests entity_id: str Entity id status: str @@ -355,7 +351,7 @@ def generate_row_results_df( # Generate a new uuid base on the unique field. Note that the set is because some # tests, eg duplicate forms, will duplicate the 'unique' field. uuid_str = ( - str(run_id) + entity_name + view_name + id_column_name + str(time.time_ns()) + str(run_id) + entity_id + view_name + id_column_name + str(time.time_ns()) ) id_column_values = list(set(id_column_values)) uuid_list_uid = [ @@ -379,7 +375,6 @@ def generate_failing_passing_dfs( passing_ids: list, run_id: str, test_id: str, - entity_name: str, entity_id: str, view_name: str, id_column_name: str, @@ -396,9 +391,6 @@ def generate_failing_passing_dfs( Current run ID, as found in dot.run_log test_id: str ID of the tests, as found in dot.configured_tests - entity_name: str - Entity view of data tested, or the name of the primary table for custom - sql tests entity_id: str Entity id view_name: str @@ -417,7 +409,6 @@ def generate_failing_passing_dfs( failing_ids, run_id, test_id, - entity_name, entity_id, "fail", view_name, @@ -427,7 +418,6 @@ def generate_failing_passing_dfs( passing_ids, run_id, test_id, - entity_name, entity_id, "pass", view_name, @@ -482,10 +472,12 @@ def get_test_rows( # result df, they determine ids id_col_names = ["uuid_list", "uuid", "index", "reported_by", "value_field"] + print(f"\n\n\n\n\n {tests_summary.head(10)}\n\n\n\n") + for _, row in tests_summary.iterrows(): failed_tests_view = row["failed_tests_view"] entity_id = row["entity_id"] - entity_or_primary_table = get_entity_name_from_id(project_id, row["entity_id"]) + entity_or_primary_table = entity_id test_id = row["test_id"] test_type = row["test_type"] column_name = row["column_name"] @@ -493,6 +485,12 @@ def get_test_rows( id_column_name = row.get("id_column_name") test_parameters = row["test_parameters"] + print(f"\n\n\n\n\n {failed_tests_view}\n{entity_id}\n{entity_or_primary_table}\n{test_id}\n{test_type}\n{column_name}" + f"\n{test_status}" + f"\n{id_column_name}" + f"\n{test_parameters}") + + # Get entity data from the DB if not entity_or_primary_table in entity_data: entity_or_primary_table = entity_or_primary_table.split("_id")[0] @@ -812,7 +810,7 @@ def set_summary_stats( failed_count = [] for _, row in tests_summary.iterrows(): failed_tests_view = row["failed_tests_view"] - entity_or_primary_table = get_entity_name_from_id(project_id, row["entity_id"]) + entity_or_primary_table = row["entity_id"] test_status = row["test_status"] # Get entity row count @@ -853,64 +851,6 @@ def set_summary_stats( return tests_summary -def get_entity_id_from_name(project_id: str, entity_name: str) -> str: - """ - Gets entity name from entity_id - - Parameters - ---------- - project_id - - entity_name e.g. dot_model__ancview_delivery - - Returns - ------- - - """ - schema_dot, _, conn_dot = get_db_params_from_config( - DbParamsConfigFile["dot_config.yml"], DbParamsConnection["dot"], project_id - ) - - query = f""" - SELECT - entity_id - FROM - {schema_dot}.configured_entities - WHERE - entity_name = '{entity_name.replace(dot_model_PREFIX, "")}' - """ - return _get_entity(conn_dot, query) - - -def get_entity_name_from_id(project_id: str, entity_id: str) -> str: - """ - Gets entity name from entity_id - - Parameters - ---------- - project_id - - entity_name e.g. dot_model__ancview_delivery - - Returns - ------- - - """ - schema_dot, _, conn_dot = get_db_params_from_config( - DbParamsConfigFile["dot_config.yml"], DbParamsConnection["dot"], project_id - ) - - query = f""" - SELECT - entity_name - FROM - {schema_dot}.configured_entities - WHERE - entity_id = '{entity_id}' - """ - return f"{dot_model_PREFIX}{_get_entity(conn_dot, query)}" - - def _get_entity(conn_dot: pg.extensions.connection, query: str) -> str: """ Gets entity name from entity_id @@ -919,8 +859,6 @@ def _get_entity(conn_dot: pg.extensions.connection, query: str) -> str: ---------- project_id - entity_name e.g. dot_model__ancview_delivery - Returns ------- From 5576134a2207d6e35af41160db2e82a139e173a7 Mon Sep 17 00:00:00 2001 From: janer Date: Wed, 4 Jan 2023 15:28:56 -0500 Subject: [PATCH 2/6] DWK-718: Interim fixes to omit the use of entity id (uuid) code will be simplified in the next pr. --- dot/utils/configuration_management.py | 8 ++--- dot/utils/configuration_utils.py | 1 + dot/utils/dbt.py | 6 ++-- dot/utils/run_management.py | 3 -- dot/utils/utils.py | 50 +++++++++++---------------- 5 files changed, 29 insertions(+), 39 deletions(-) diff --git a/dot/utils/configuration_management.py b/dot/utils/configuration_management.py index 4b8b258..0b857c9 100644 --- a/dot/utils/configuration_management.py +++ b/dot/utils/configuration_management.py @@ -21,6 +21,7 @@ GE_GREAT_EXPECTATIONS_FINAL_FILENAME, GE_CONFIG_VARIABLES_FINAL_FILENAME, load_config_file, + DBT_MODELNAME_PREFIX ) from utils.dbt import create_core_entities @@ -321,7 +322,7 @@ def generate_tests_from_db(project_id, logger=logging.Logger): if ( entity_id not in config_options.keys() ): # pylint: disable=consider-iterating-dictionary - config_options[entity_id] = {"name": entity_id, "columns": {}} + config_options[entity_id] = {"name": f"{DBT_MODELNAME_PREFIX}{entity_id}", "columns": {}} # Loop through tests for this entity df = dbt_schema_tests.loc[dot_tests["entity_id"] == entity_id] @@ -330,7 +331,6 @@ def generate_tests_from_db(project_id, logger=logging.Logger): description = row["description"] test_type = row["test_type"] test_parameters = row["test_parameters"] - # if test_parameters != None: # test_parameters = "| ".join([f"{k}={test_parameters[k]}" for k in test_parameters]) # else: @@ -386,7 +386,7 @@ def generate_tests_from_db(project_id, logger=logging.Logger): yaml_content = yaml.safe_dump( cfg, default_flow_style=False, sort_keys=False, indent=4 ) - output_file = model_dir + "/" + entity_id + ".yml" + output_file = model_dir + "/" + DBT_MODELNAME_PREFIX + entity_id + ".yml" logger.info("Writing schema test file: " + output_file) with open(output_file, "w") as f: f.write(yaml_content) @@ -404,7 +404,7 @@ def generate_tests_from_db(project_id, logger=logging.Logger): df = dbt_non_schema_tests.loc[dot_tests["entity_id"] == entity_id] for index, row in df.iterrows(): custom_sql = row["test_parameters"]["query"] - output_file = tests_dir + "/" + entity_id + "_id" + str(index) + ".sql" + output_file = tests_dir + "/" + DBT_MODELNAME_PREFIX + entity_id + "_id" + str(index) + ".sql" logger.info("Writing custom sql test file: " + output_file) with open(output_file, "w") as f: f.write(custom_sql) diff --git a/dot/utils/configuration_utils.py b/dot/utils/configuration_utils.py index 02cd866..18d506f 100644 --- a/dot/utils/configuration_utils.py +++ b/dot/utils/configuration_utils.py @@ -18,6 +18,7 @@ GE_CONFIG_VARIABLES_FINAL_FILENAME = ( "./great_expectations/uncommitted/config_variables.yml" ) +DBT_MODELNAME_PREFIX = "dot_model__" DBT_PROJECT_SEPARATOR = "/" diff --git a/dot/utils/dbt.py b/dot/utils/dbt.py index 0f62eda..7b52144 100644 --- a/dot/utils/dbt.py +++ b/dot/utils/dbt.py @@ -12,7 +12,6 @@ get_short_test_name, get_configured_tests_row, run_sub_process, - dot_model_PREFIX, ) from utils.connection_utils import get_db_params_from_config from utils.configuration_utils import ( @@ -20,6 +19,7 @@ DbParamsConnection, get_dbt_config_model_paths, adapt_core_entities, + DBT_MODELNAME_PREFIX ) from utils.dbt_logs import ( read_dbt_logs, @@ -253,7 +253,7 @@ def extract_df_from_dbt_test_results_json( dbt_tests_summary = {} for row in dbt_results: processed_row = process_dbt_logs_row(row) - entity_id = processed_row.entity_id + entity_id = processed_row.entity_id.replace(DBT_MODELNAME_PREFIX,"") configured_test_row = get_configured_tests_row( processed_row.test_type, entity_id, @@ -339,7 +339,7 @@ def create_core_entities( for i, row in configured_entities.iterrows(): filename = os.path.join( - output_path, f"{dot_model_PREFIX}{row['entity_id']}.sql" + output_path, f"{DBT_MODELNAME_PREFIX}{row['entity_id']}.sql" ) logger.info(f"Writing core entity file: {filename}") with open(filename, "w") as f: diff --git a/dot/utils/run_management.py b/dot/utils/run_management.py index 57caf7d..c9fa2de 100644 --- a/dot/utils/run_management.py +++ b/dot/utils/run_management.py @@ -175,9 +175,6 @@ def run_dot_tests(project_id, logger, run_id): logger.info("Running tests for project_id: %s", project_id) # Run the dot_pipeline - print('\n\n\n') - print(project_id, logger, run_id) - print('\n\n\n') run_dot_stages(project_id, logger, run_id) # If no errors occur updates SQL table to say completed diff --git a/dot/utils/utils.py b/dot/utils/utils.py index db69487..1eb25be 100644 --- a/dot/utils/utils.py +++ b/dot/utils/utils.py @@ -14,8 +14,8 @@ from pandas import json_normalize from utils.connection_utils import get_db_params_from_config, get_metadata from utils.configuration_utils import DbParamsConfigFile, DbParamsConnection +from utils.configuration_utils import DBT_MODELNAME_PREFIX -dot_model_PREFIX = "dot_model__" def setup_custom_logger(log_name, log_level, file_logger=False): @@ -257,7 +257,7 @@ def get_configured_tests_row( {schema_dot}.configured_tests WHERE test_type = '{test_type}' AND - entity_id = '{entity_id}' AND + entity_id = '{entity_id.replace(DBT_MODELNAME_PREFIX,"")}' AND column_name = '{column}' {test_params_clause} """ @@ -472,12 +472,10 @@ def get_test_rows( # result df, they determine ids id_col_names = ["uuid_list", "uuid", "index", "reported_by", "value_field"] - print(f"\n\n\n\n\n {tests_summary.head(10)}\n\n\n\n") - for _, row in tests_summary.iterrows(): failed_tests_view = row["failed_tests_view"] entity_id = row["entity_id"] - entity_or_primary_table = entity_id + entity_id_or_primary_table = f"{DBT_MODELNAME_PREFIX}{entity_id}" test_id = row["test_id"] test_type = row["test_type"] column_name = row["column_name"] @@ -485,20 +483,14 @@ def get_test_rows( id_column_name = row.get("id_column_name") test_parameters = row["test_parameters"] - print(f"\n\n\n\n\n {failed_tests_view}\n{entity_id}\n{entity_or_primary_table}\n{test_id}\n{test_type}\n{column_name}" - f"\n{test_status}" - f"\n{id_column_name}" - f"\n{test_parameters}") - - # Get entity data from the DB - if not entity_or_primary_table in entity_data: - entity_or_primary_table = entity_or_primary_table.split("_id")[0] - entity_data[entity_or_primary_table] = pd.read_sql( - f"SELECT * FROM {schema_core}.{entity_or_primary_table}", conn_core + if not entity_id_or_primary_table in entity_data: + entity_id_or_primary_table = entity_id_or_primary_table.split("_id")[0] + entity_data[entity_id_or_primary_table] = pd.read_sql( + f"SELECT * FROM {schema_core}.{entity_id_or_primary_table.replace(DBT_MODELNAME_PREFIX+DBT_MODELNAME_PREFIX, DBT_MODELNAME_PREFIX)}", conn_core ) - entity_df = entity_data[entity_or_primary_table] + entity_df = entity_data[entity_id_or_primary_table] # Get failed tests view data from the DB if test_status == "fail": @@ -510,20 +502,20 @@ def get_test_rows( "Failed tests for test type " + test_type + " on entity " - + entity_or_primary_table + + entity_id_or_primary_table ) elif test_status == "error": logger.warning( "!!!! Test type " + test_type + " on entity " - + entity_or_primary_table + + entity_id_or_primary_table + " did not execute!" ) continue else: # logger.info("All tests passed for test type " + test_type + " on entity - # " + entity_or_primary_table) + # " + entity_id_or_primary_table) continue # Interrogate results dataframes to identify unique id field and failing rows @@ -607,7 +599,7 @@ def get_test_rows( "Unknown ID column for test_type " + test_type + " cannot be processed with entity " - + entity_or_primary_table + + entity_id_or_primary_table + " which has test view columns: " + str(test_results_df_cols) ) @@ -617,7 +609,7 @@ def get_test_rows( " -- Test type " + test_type + " on entity " - + entity_or_primary_table + + entity_id_or_primary_table + " has id field " + unique_column_name + " test view:" @@ -645,8 +637,7 @@ def get_test_rows( passing_ids, run_id, test_id, - entity_or_primary_table, - entity_id, + entity_id_or_primary_table, failed_tests_view, unique_column_name, ) @@ -810,18 +801,18 @@ def set_summary_stats( failed_count = [] for _, row in tests_summary.iterrows(): failed_tests_view = row["failed_tests_view"] - entity_or_primary_table = row["entity_id"] + entity_id_or_primary_table = row["entity_id"] test_status = row["test_status"] # Get entity row count - if not entity_or_primary_table in entity_count_map: - entity_or_primary_table = entity_or_primary_table.split("_id")[0] + if not entity_id_or_primary_table in entity_count_map: + entity_id_or_primary_table = entity_id_or_primary_table.split("_id")[0] c = pd.read_sql( - f"SELECT count(*) FROM {schema_core}.{entity_or_primary_table}", + f"SELECT count(*) FROM {schema_core}.{DBT_MODELNAME_PREFIX}{entity_id_or_primary_table.replace(DBT_MODELNAME_PREFIX,'')}", conn_data, ) - entity_count_map[entity_or_primary_table] = float(c.iloc[0, 0]) - c = entity_count_map[entity_or_primary_table] + entity_count_map[entity_id_or_primary_table] = float(c.iloc[0, 0]) + c = entity_count_map[entity_id_or_primary_table] entity_count.append(c) # Get failed row count @@ -840,6 +831,7 @@ def set_summary_stats( tests_summary["rows_total"] = entity_count tests_summary["rows_failed"] = failed_count + tests_summary["entity_id"] = tests_summary["entity_id"].apply(lambda x: x.replace(DBT_MODELNAME_PREFIX,'')) tests_summary["rows_passed"] = tests_summary.apply( lambda x: x["rows_total"] - x["rows_failed"] From a7587cb2f79bc455f5997fa6d7b708dee3b9e7f9 Mon Sep 17 00:00:00 2001 From: janer Date: Thu, 5 Jan 2023 09:55:35 -0500 Subject: [PATCH 3/6] DWK-718: Slight adjustment to fix drilldown in appsmith UI --- dot/utils/utils.py | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/dot/utils/utils.py b/dot/utils/utils.py index 1eb25be..7c71b32 100644 --- a/dot/utils/utils.py +++ b/dot/utils/utils.py @@ -409,7 +409,7 @@ def generate_failing_passing_dfs( failing_ids, run_id, test_id, - entity_id, + entity_id.replace(DBT_MODELNAME_PREFIX,''), "fail", view_name, id_column_name, @@ -418,7 +418,7 @@ def generate_failing_passing_dfs( passing_ids, run_id, test_id, - entity_id, + entity_id.replace(DBT_MODELNAME_PREFIX,''), "pass", view_name, id_column_name, From 76b642b1b2b32c32ff12e572480e171e07237a3e Mon Sep 17 00:00:00 2001 From: janer Date: Tue, 10 Jan 2023 13:49:09 -0500 Subject: [PATCH 4/6] DWK-718: Fixed self tests (to be verified with this commit) --- .../extract_df_from_dbt_test_results_json.csv | 13 ++++++++----- dot/self_tests/unit/test_dbt.py | 2 +- dot/self_tests/unit/test_dot_utils.py | 14 +++++++------- .../unit/test_dot_utils_schema_improved.py | 6 +++--- 4 files changed, 19 insertions(+), 16 deletions(-) diff --git a/dot/self_tests/data/expected/extract_df_from_dbt_test_results_json.csv b/dot/self_tests/data/expected/extract_df_from_dbt_test_results_json.csv index fc79379..633f10a 100644 --- a/dot/self_tests/data/expected/extract_df_from_dbt_test_results_json.csv +++ b/dot/self_tests/data/expected/extract_df_from_dbt_test_results_json.csv @@ -1,5 +1,5 @@ ,run_id,test_id,entity_id,test_type,column_name,id_column_name,test_parameters,test_status,test_status_message,failed_tests_view,failed_tests_view_sql -test.dbt_model_1.accepted_values_dot_model__all_flight_data_stops__1__2__3__Non_stop.b734743116,4541476c-814e-43fe-ab38-786f36beecbc,dac4c545-f610-3dae-ad82-1ddf27dae144,ca4513fa-96e0-3a95-a1a8-7f0c127ea82a,accepted_values,stops,,"{'values': ['1', '2', '3', 'Non-stop']}",fail,"got 2 results, configured to fail if != 0",tr_dot_model__all_flight_data_accepted_values_stops," WITH all_values AS ( +test.dbt_model_1.accepted_values_dot_model__all_flight_data_stops__1__2__3__Non_stop.b734743116,4541476c-814e-43fe-ab38-786f36beecbc,cad13f73-27b5-3427-be8f-4d213bba3b19,all_flight_data,accepted_values,stops,,"{'values': ['1', '2', '3', 'Non-stop']}",fail,"got 2 results, configured to fail if != 0",tr_dot_model__all_flight_data_accepted_values_stops," WITH all_values AS ( SELECT dot_model__all_flight_data.stops AS value_field, count(*) AS n_records FROM self_tests_public_tests.dot_model__all_flight_data @@ -9,11 +9,12 @@ test.dbt_model_1.accepted_values_dot_model__all_flight_data_stops__1__2__3__Non_ all_values.n_records FROM all_values WHERE all_values.value_field::text <> ALL (ARRAY['1'::character varying::text, '2'::character varying::text, '3'::character varying::text, 'Non-stop'::character varying::text]);" -test.dbt_model_1.not_negative_string_column_dot_model__all_flight_data_price__price.322389c2ba,4541476c-814e-43fe-ab38-786f36beecbc,49aa2fd3-511c-3d84-a782-a5daf57f98da,ca4513fa-96e0-3a95-a1a8-7f0c127ea82a,not_negative_string_column,price,,{'name': 'price'},fail,"got 1 result, configured to fail if != 0",tr_dot_model__all_flight_data_price," SELECT array_agg(dot_model__all_flight_data.uuid) AS uuid_list +test.dbt_model_1.not_negative_string_column_dot_model__all_flight_data_price__price.322389c2ba,4541476c-814e-43fe-ab38-786f36beecbc,ed27037a-4054-3070-9d88-fdf9cd0231c8,all_flight_data,not_negative_string_column,price,,{'name': 'price'},fail,"got 1 result, configured to fail if != 0",tr_dot_model__all_flight_data_price," SELECT array_agg(dot_model__all_flight_data.uuid) AS uuid_list FROM self_tests_public_tests.dot_model__all_flight_data WHERE dot_model__all_flight_data.price::character varying::text ~~ '-%'::text HAVING count(*) > 0;" -test.dbt_model_1.not_null_dot_model__all_flight_data_origin_airport.2196b664b6,4541476c-814e-43fe-ab38-786f36beecbc,983a5746-bea7-3072-9a80-2c1c6706ceed,ca4513fa-96e0-3a95-a1a8-7f0c127ea82a,not_null,origin_airport,,{},fail,"got 53 results, configured to fail if != 0",tr_dot_model__all_flight_data_not_null_origin_a," SELECT dot_model__all_flight_data.uuid, + +test.dbt_model_1.not_null_dot_model__all_flight_data_origin_airport.2196b664b6,4541476c-814e-43fe-ab38-786f36beecbc,df44c2f4-65f8-3170-a03f-6035aaa45660,all_flight_data,not_null,origin_airport,,{},fail,"got 53 results, configured to fail if != 0",tr_dot_model__all_flight_data_not_null_origin_a," SELECT dot_model__all_flight_data.uuid, dot_model__all_flight_data.departure_time, dot_model__all_flight_data.airline, dot_model__all_flight_data.origin_airport, @@ -24,7 +25,8 @@ test.dbt_model_1.not_null_dot_model__all_flight_data_origin_airport.2196b664b6,4 dot_model__all_flight_data.price FROM self_tests_public_tests.dot_model__all_flight_data WHERE dot_model__all_flight_data.origin_airport IS NULL;" -test.dbt_model_1.relationships_dot_model__all_flight_data_origin_airport__airport__flight_with_no_airport__ref_dot_model__all_airports_data_.3a9f7e32d9,4541476c-814e-43fe-ab38-786f36beecbc,7aa26bda-57e1-39b8-a3e9-979a3d882577,ca4513fa-96e0-3a95-a1a8-7f0c127ea82a,relationships,origin_airport,,"{'to': ""ref('dot_model__all_airports_data')"", 'name': 'flight_with_no_airport', 'field': 'airport'}",fail,"got 1 result, configured to fail if != 0",tr_dot_model__all_flight_data_flight_with_no_a," SELECT array_agg(from_model.from_uuid) AS uuid_list + +test.dbt_model_1.relationships_dot_model__all_flight_data_origin_airport__airport__flight_with_no_airport__ref_dot_model__all_airports_data_.3a9f7e32d9,4541476c-814e-43fe-ab38-786f36beecbc,2ba7f3e8-cd62-37ac-854f-01f704489130,all_flight_data,relationships,origin_airport,,"{'to': ""ref('dot_model__all_airports_data')"", 'name': 'flight_with_no_airport', 'field': 'airport'}",fail,"got 1 result, configured to fail if != 0",tr_dot_model__all_flight_data_flight_with_no_a," SELECT array_agg(from_model.from_uuid) AS uuid_list FROM ( SELECT dot_model__all_flight_data.uuid AS from_uuid, dot_model__all_flight_data.origin_airport AS from_column_id FROM self_tests_public_tests.dot_model__all_flight_data) from_model @@ -32,7 +34,8 @@ test.dbt_model_1.relationships_dot_model__all_flight_data_origin_airport__airpor FROM self_tests_public_tests.dot_model__all_airports_data) to_model ON to_model.to_id::text = from_model.from_column_id::text WHERE from_model.from_column_id IS NOT NULL AND to_model.to_id IS NULL HAVING count(*) > 0;" -test.dbt_model_1.unique_dot_model__all_airports_data_airport.912f240fa1,4541476c-814e-43fe-ab38-786f36beecbc,aa1c361c-a9ba-350e-9959-e92a5654f7dc,7b689796-afde-3930-87be-ed8b7c7a0474,unique,airport,,{},fail,"got 2 results, configured to fail if != 0",tr_dot_model__all_airports_data_unique_airport," SELECT dot_model__all_airports_data.airport AS unique_field, + +test.dbt_model_1.unique_dot_model__all_airports_data_airport.912f240fa1,4541476c-814e-43fe-ab38-786f36beecbc,942f4496-1202-3768-9cfe-96128bcd754c,all_airports_data,unique,airport,,{},fail,"got 2 results, configured to fail if != 0",tr_dot_model__all_airports_data_unique_airport," SELECT dot_model__all_airports_data.airport AS unique_field, count(*) AS n_records FROM self_tests_public_tests.dot_model__all_airports_data WHERE dot_model__all_airports_data.airport IS NOT NULL diff --git a/dot/self_tests/unit/test_dbt.py b/dot/self_tests/unit/test_dbt.py index 0d1ad65..58c908e 100644 --- a/dot/self_tests/unit/test_dbt.py +++ b/dot/self_tests/unit/test_dbt.py @@ -23,7 +23,7 @@ class DbtUtilsTest(BaseSelfTestClass): def setUp(self) -> None: with open("self_tests/data/queries/dbt_core_generated_objects.sql", "r") as f: - self.create_self_tests_db_schema(f.read()) + self.create_self_tests_db_schema(additional_query=f.read()) @patch("utils.configuration_utils._get_filename_safely") def test_extract_df_from_dbt_test_results_json( diff --git a/dot/self_tests/unit/test_dot_utils.py b/dot/self_tests/unit/test_dot_utils.py index 71225e6..2b3664f 100644 --- a/dot/self_tests/unit/test_dot_utils.py +++ b/dot/self_tests/unit/test_dot_utils.py @@ -39,8 +39,8 @@ def get_test_summary(run_id: uuid.UUID) -> Tuple[pd.DataFrame, uuid.UUID]: """ test_summary_row = { "run_id": run_id, - "test_id": "dac4c545-f610-3dae-ad82-1ddf27dae144", - "entity_id": "ca4513fa-96e0-3a95-a1a8-7f0c127ea82a", + "test_id": "cad13f73-27b5-3427-be8f-4d213bba3b19", + "entity_id": "all_flight_data", "test_type": "accepted_values", "column_name": "stops", "id_column_name": None, @@ -110,7 +110,7 @@ def test_get_test_id( generated_test_id = get_test_id( test_type="not_negative_string_column", - entity_id="ca4513fa-96e0-3a95-a1a8-7f0c127ea82a", + entity_id="all_flight_data", column="price", project_id="ScanProject1", test_parameters="""$$ @@ -121,7 +121,7 @@ def test_get_test_id( "\n", "" ), ) - expected_test_id = "49aa2fd3-511c-3d84-a782-a5daf57f98da" + expected_test_id = "ed27037a-4054-3070-9d88-fdf9cd0231c8" self.assertEqual( expected_test_id, generated_test_id, @@ -217,12 +217,12 @@ def test_get_configured_tests_row( configured_tests_row = get_configured_tests_row( test_type="not_negative_string_column", - entity_id="ca4513fa-96e0-3a95-a1a8-7f0c127ea82a", + entity_id="all_flight_data", column="price", project_id="ScanProject1", test_parameters="{'name': 'price'}", ) - expected_test_id = "49aa2fd3-511c-3d84-a782-a5daf57f98da" + expected_test_id = "ed27037a-4054-3070-9d88-fdf9cd0231c8" self.assertEqual( expected_test_id, configured_tests_row["test_id"], @@ -238,7 +238,7 @@ def test_get_configured_tests_row( "description": "Price is not negative", "impact": "", "proposed_remediation": "", - "entity_id": "ca4513fa-96e0-3a95-a1a8-7f0c127ea82a", + "entity_id": "all_flight_data", "test_type": "not_negative_string_column", "column_name": "price", "column_description": "", diff --git a/dot/self_tests/unit/test_dot_utils_schema_improved.py b/dot/self_tests/unit/test_dot_utils_schema_improved.py index 57b969d..b98ed8c 100644 --- a/dot/self_tests/unit/test_dot_utils_schema_improved.py +++ b/dot/self_tests/unit/test_dot_utils_schema_improved.py @@ -42,12 +42,12 @@ def test_get_configured_tests_row( configured_tests_row = get_configured_tests_row( test_type="accepted_values", - entity_id="ca4513fa-96e0-3a95-a1a8-7f0c127ea82a", + entity_id="all_flight_data", column="stops", project_id="ScanProject1", test_parameters='{"values": ["1", "2", "3", "Non-stop"]}', ) - expected_test_id = "dac4c545-f610-3dae-ad82-1ddf27dae144" + expected_test_id = "cad13f73-27b5-3427-be8f-4d213bba3b19" self.assertEqual( expected_test_id, configured_tests_row["test_id"], @@ -63,7 +63,7 @@ def test_get_configured_tests_row( "description": "Disallowed FP methods entered in form", "impact": "", "proposed_remediation": "", - "entity_id": "ca4513fa-96e0-3a95-a1a8-7f0c127ea82a", + "entity_id": "all_flight_data", "test_type": "accepted_values", "column_name": "stops", "column_description": "", From 90ca647d95f7184062d4445758fadca021327042 Mon Sep 17 00:00:00 2001 From: janer Date: Tue, 10 Jan 2023 15:59:38 -0500 Subject: [PATCH 5/6] DWK-718: Fixed self tests since integration tests had failed in last commit --- .../expected/integration/test_results.csv | 1142 ++++++++--------- 1 file changed, 571 insertions(+), 571 deletions(-) diff --git a/dot/self_tests/data/expected/integration/test_results.csv b/dot/self_tests/data/expected/integration/test_results.csv index bd475c7..bd91bff 100644 --- a/dot/self_tests/data/expected/integration/test_results.csv +++ b/dot/self_tests/data/expected/integration/test_results.csv @@ -1,572 +1,572 @@ ,test_result_id,run_id,test_id,entity_id,status,view_name,id_column_name,id_column_value 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+554,b5fd1157-e4e1-3ed4-804f-55bb65445430,fce38b78-5b90-4662-9c14-d93c88fe5323,59b7fabd-acb8-3a38-8cbf-91736a214cab,all_flight_data,fail,tr_dot_model__all_flight_data_possible_duplicate_f,uuid,2b60fcd8-ce1f-3687-8167-c488bd68ab23 +555,16582083-2712-38d8-9d14-b1185f082e0b,fce38b78-5b90-4662-9c14-d93c88fe5323,59b7fabd-acb8-3a38-8cbf-91736a214cab,all_flight_data,fail,tr_dot_model__all_flight_data_possible_duplicate_f,uuid,82a8fe19-dfd3-3afa-9501-bfa547fb42a5 +556,15794532-3f26-3895-a045-542b39644f4e,fce38b78-5b90-4662-9c14-d93c88fe5323,59b7fabd-acb8-3a38-8cbf-91736a214cab,all_flight_data,fail,tr_dot_model__all_flight_data_possible_duplicate_f,uuid,09007c9b-46ba-3248-b095-10e166f862db +557,e1b28a5b-809e-372a-82ff-efe71184b046,fce38b78-5b90-4662-9c14-d93c88fe5323,59b7fabd-acb8-3a38-8cbf-91736a214cab,all_flight_data,fail,tr_dot_model__all_flight_data_possible_duplicate_f,uuid,cd729559-04ce-322c-9919-894ee5c1f30f +558,bbfcba71-e8f2-38ed-8abe-5705359953cf,fce38b78-5b90-4662-9c14-d93c88fe5323,59b7fabd-acb8-3a38-8cbf-91736a214cab,all_flight_data,fail,tr_dot_model__all_flight_data_possible_duplicate_f,uuid,104c7dec-cd9e-385f-acad-bd69012da521 +559,dd5e0483-0da8-3105-a9aa-7e6a065555ab,fce38b78-5b90-4662-9c14-d93c88fe5323,59b7fabd-acb8-3a38-8cbf-91736a214cab,all_flight_data,fail,tr_dot_model__all_flight_data_possible_duplicate_f,uuid,47e66230-56f1-3ee1-a3e2-2e561fd22bf2 +560,54580284-5431-3f0c-a52d-8e6564282ade,fce38b78-5b90-4662-9c14-d93c88fe5323,59b7fabd-acb8-3a38-8cbf-91736a214cab,all_flight_data,fail,tr_dot_model__all_flight_data_possible_duplicate_f,uuid,e062b734-1f0b-365a-98da-37e37dfa060c +561,b9e3ab80-a773-379b-9d30-e98113a4555c,fce38b78-5b90-4662-9c14-d93c88fe5323,59b7fabd-acb8-3a38-8cbf-91736a214cab,all_flight_data,fail,tr_dot_model__all_flight_data_possible_duplicate_f,uuid,933fffec-e921-38ef-bfaa-6a8ab69acbde +562,ede3fcfd-6886-3fcc-88f1-60a71959c900,fce38b78-5b90-4662-9c14-d93c88fe5323,59b7fabd-acb8-3a38-8cbf-91736a214cab,all_flight_data,fail,tr_dot_model__all_flight_data_possible_duplicate_f,uuid,c18528df-ffa5-305f-bc3e-fb64fff4c4cd +563,1d6c648a-427b-3524-9ae3-ff24343d351a,fce38b78-5b90-4662-9c14-d93c88fe5323,2ba7f3e8-cd62-37ac-854f-01f704489130,all_flight_data,fail,tr_dot_model__all_flight_data_flight_with_no_a,uuid,c37def2e-a3d5-34df-863a-5672159c213a +564,f61df718-b9ef-3d63-b15e-0db555cfa64d,fce38b78-5b90-4662-9c14-d93c88fe5323,2ba7f3e8-cd62-37ac-854f-01f704489130,all_flight_data,fail,tr_dot_model__all_flight_data_flight_with_no_a,uuid,e7431fec-cbb7-3217-aee5-7bcdb8ac9384 +565,6853cd12-6699-3b3f-945c-0d6e1bd52d88,fce38b78-5b90-4662-9c14-d93c88fe5323,2ba7f3e8-cd62-37ac-854f-01f704489130,all_flight_data,fail,tr_dot_model__all_flight_data_flight_with_no_a,uuid,5ef0d847-9158-371f-b98b-089933021bf7 +566,2b96ffdb-4715-3cba-b71e-3521eb91f6d7,fce38b78-5b90-4662-9c14-d93c88fe5323,2ba7f3e8-cd62-37ac-854f-01f704489130,all_flight_data,fail,tr_dot_model__all_flight_data_flight_with_no_a,uuid,a589ea84-4e66-37e8-a187-746810c10d2c +567,d08d95c7-ca58-3b5a-bf98-85a133637270,fce38b78-5b90-4662-9c14-d93c88fe5323,2ba7f3e8-cd62-37ac-854f-01f704489130,all_flight_data,fail,tr_dot_model__all_flight_data_flight_with_no_a,uuid,87c9d88a-0693-300d-a629-b7cbee1e5323 +568,87c0754f-e8ae-3b35-b2e4-4e65af39e430,fce38b78-5b90-4662-9c14-d93c88fe5323,942f4496-1202-3768-9cfe-96128bcd754c,all_airports_data,fail,tr_dot_model__all_airports_data_unique_airport,airport,Harbin Yangjiagang airport +569,85a86a55-de6c-35bf-a3c6-ce928809d71e,fce38b78-5b90-4662-9c14-d93c88fe5323,942f4496-1202-3768-9cfe-96128bcd754c,all_airports_data,fail,tr_dot_model__all_airports_data_unique_airport,airport,Belize +570,1f44096a-165e-375d-8e82-821b79654b61,fce38b78-5b90-4662-9c14-d93c88fe5323,8abccc35-874f-3e54-98eb-6eed5c00cf72,all_flight_data,fail,chv_tr_different_dot_model__all_flight_data_price_distribution,airline,British Airways From 5f2dd83150de2cfd691e7148bcc120c6d001f0d4 Mon Sep 17 00:00:00 2001 From: janer Date: Tue, 10 Jan 2023 17:07:37 -0500 Subject: [PATCH 6/6] DWK-718: One more self test fix --- .../integration/test_results_summary.csv | 16 ++++++++-------- 1 file changed, 8 insertions(+), 8 deletions(-) diff --git a/dot/self_tests/data/expected/integration/test_results_summary.csv b/dot/self_tests/data/expected/integration/test_results_summary.csv index 7ab17c1..c28ac2f 100644 --- a/dot/self_tests/data/expected/integration/test_results_summary.csv +++ b/dot/self_tests/data/expected/integration/test_results_summary.csv @@ -1,5 +1,5 @@ ,run_id,test_id,entity_id,test_type,column_name,test_parameters,test_status,test_status_message,failed_tests_view,failed_tests_view_sql,rows_total,rows_failed,rows_passed -0,fce38b78-5b90-4662-9c14-d93c88fe5323,dac4c545-f610-3dae-ad82-1ddf27dae144,ca4513fa-96e0-3a95-a1a8-7f0c127ea82a,accepted_values,stops,"{'values': ['1', '2', '3', 'Non-stop']}",fail,"got 2 results, configured to fail if != 0",tr_dot_model__all_flight_data_accepted_values_stops," WITH all_values AS ( +0,fce38b78-5b90-4662-9c14-d93c88fe5323,cad13f73-27b5-3427-be8f-4d213bba3b19,all_flight_data,accepted_values,stops,"{'values': ['1', '2', '3', 'Non-stop']}",fail,"got 2 results, configured to fail if != 0",tr_dot_model__all_flight_data_accepted_values_stops," WITH all_values AS ( SELECT dot_model__all_flight_data.stops AS value_field, count(*) AS n_records FROM self_tests_public_tests.dot_model__all_flight_data @@ -9,7 +9,7 @@ all_values.n_records FROM all_values WHERE all_values.value_field::text <> ALL (ARRAY['1'::character varying, '2'::character varying, '3'::character varying, 'Non-stop'::character varying]::text[]);",1001,2,999 -1,fce38b78-5b90-4662-9c14-d93c88fe5323,a481c896-21be-3d8a-9156-bb5ca27c2b0e,ca4513fa-96e0-3a95-a1a8-7f0c127ea82a,custom_sql,," +1,fce38b78-5b90-4662-9c14-d93c88fe5323,a87d911d-28cb-3453-a777-b62cec58c7ba,all_flight_data,custom_sql,," select distinct uuid, 'dot_model__all_flight_data' as primary_table, @@ -21,11 +21,11 @@ 'uuid'::text AS primary_table_id_field FROM self_tests_public_tests.dot_model__all_flight_data WHERE regexp_replace(COALESCE(dot_model__all_flight_data.stops, '0'::character varying)::text, '[^0-9]+'::text, '0'::text, 'g'::text)::integer > 5;",1001,1,1000 -2,fce38b78-5b90-4662-9c14-d93c88fe5323,49aa2fd3-511c-3d84-a782-a5daf57f98da,ca4513fa-96e0-3a95-a1a8-7f0c127ea82a,not_negative_string_column,price,{'name': 'price'},fail,"got 1 result, configured to fail if != 0",tr_dot_model__all_flight_data_price," SELECT array_agg(dot_model__all_flight_data.uuid) AS uuid_list +2,fce38b78-5b90-4662-9c14-d93c88fe5323,ed27037a-4054-3070-9d88-fdf9cd0231c8,all_flight_data,not_negative_string_column,price,{'name': 'price'},fail,"got 1 result, configured to fail if != 0",tr_dot_model__all_flight_data_price," SELECT array_agg(dot_model__all_flight_data.uuid) AS uuid_list FROM self_tests_public_tests.dot_model__all_flight_data WHERE dot_model__all_flight_data.price::character varying::text ~~ '-%'::text HAVING count(*) > 0;",1001,1,1000 -3,fce38b78-5b90-4662-9c14-d93c88fe5323,983a5746-bea7-3072-9a80-2c1c6706ceed,ca4513fa-96e0-3a95-a1a8-7f0c127ea82a,not_null,origin_airport,{},fail,"got 53 results, configured to fail if != 0",tr_dot_model__all_flight_data_not_null_origin_a," SELECT dot_model__all_flight_data.uuid, +3,fce38b78-5b90-4662-9c14-d93c88fe5323,df44c2f4-65f8-3170-a03f-6035aaa45660,all_flight_data,not_null,origin_airport,{},fail,"got 53 results, configured to fail if != 0",tr_dot_model__all_flight_data_not_null_origin_a," SELECT dot_model__all_flight_data.uuid, dot_model__all_flight_data.departure_time, dot_model__all_flight_data.airline, dot_model__all_flight_data.origin_airport, @@ -36,7 +36,7 @@ dot_model__all_flight_data.price FROM self_tests_public_tests.dot_model__all_flight_data WHERE dot_model__all_flight_data.origin_airport IS NULL;",1001,53,948 -4,fce38b78-5b90-4662-9c14-d93c88fe5323,30c73263-50e2-3aaf-aee2-653c806bee36,ca4513fa-96e0-3a95-a1a8-7f0c127ea82a,possible_duplicate_forms,,"{'table_specific_uuid': 'uuid', 'table_specific_period': 'day', 'table_specific_patient_uuid': 'airline', 'table_specific_reported_date': 'departure_time'}",fail,"got 1 result, configured to fail if != 0",tr_dot_model__all_flight_data_possible_duplicate_f," WITH records_per_patient_period AS ( +4,fce38b78-5b90-4662-9c14-d93c88fe5323,59b7fabd-acb8-3a38-8cbf-91736a214cab,all_flight_data,possible_duplicate_forms,,"{'table_specific_uuid': 'uuid', 'table_specific_period': 'day', 'table_specific_patient_uuid': 'airline', 'table_specific_reported_date': 'departure_time'}",fail,"got 1 result, configured to fail if != 0",tr_dot_model__all_flight_data_possible_duplicate_f," WITH records_per_patient_period AS ( SELECT date_trunc('day'::text, dot_model__all_flight_data.departure_time::timestamp without time zone) AS date_period, dot_model__all_flight_data.airline AS patient_uuid_to_flag, count(dot_model__all_flight_data.uuid) AS number_of_records @@ -53,7 +53,7 @@ FROM possible_duplicate_combinations pdc LEFT JOIN self_tests_public_tests.dot_model__all_flight_data m ON date_trunc('day'::text, m.departure_time::timestamp without time zone) = pdc.date_period AND m.airline::text = pdc.patient_uuid_to_flag::text HAVING count(*) > 0;",1001,274,727 -5,fce38b78-5b90-4662-9c14-d93c88fe5323,7aa26bda-57e1-39b8-a3e9-979a3d882577,ca4513fa-96e0-3a95-a1a8-7f0c127ea82a,relationships,origin_airport,"{'to': ""ref('dot_model__all_airports_data')"", 'name': 'flight_with_no_airport', 'field': 'airport'}",fail,"got 1 result, configured to fail if != 0",tr_dot_model__all_flight_data_flight_with_no_a," SELECT array_agg(from_model.from_uuid) AS uuid_list +5,fce38b78-5b90-4662-9c14-d93c88fe5323,2ba7f3e8-cd62-37ac-854f-01f704489130,all_flight_data,relationships,origin_airport,"{'to': ""ref('dot_model__all_airports_data')"", 'name': 'flight_with_no_airport', 'field': 'airport'}",fail,"got 1 result, configured to fail if != 0",tr_dot_model__all_flight_data_flight_with_no_a," SELECT array_agg(from_model.from_uuid) AS uuid_list FROM ( SELECT dot_model__all_flight_data.uuid AS from_uuid, dot_model__all_flight_data.origin_airport AS from_column_id FROM self_tests_public_tests.dot_model__all_flight_data) from_model @@ -61,10 +61,10 @@ FROM self_tests_public_tests.dot_model__all_airports_data) to_model ON to_model.to_id::text = from_model.from_column_id::text WHERE from_model.from_column_id IS NOT NULL AND to_model.to_id IS NULL HAVING count(*) > 0;",1001,5,996 -6,fce38b78-5b90-4662-9c14-d93c88fe5323,aa1c361c-a9ba-350e-9959-e92a5654f7dc,7b689796-afde-3930-87be-ed8b7c7a0474,unique,airport,{},fail,"got 2 results, configured to fail if != 0",tr_dot_model__all_airports_data_unique_airport," SELECT dot_model__all_airports_data.airport AS unique_field, +6,fce38b78-5b90-4662-9c14-d93c88fe5323,942f4496-1202-3768-9cfe-96128bcd754c,all_airports_data,unique,airport,{},fail,"got 2 results, configured to fail if != 0",tr_dot_model__all_airports_data_unique_airport," SELECT dot_model__all_airports_data.airport AS unique_field, count(*) AS n_records FROM self_tests_public_tests.dot_model__all_airports_data WHERE dot_model__all_airports_data.airport IS NOT NULL GROUP BY dot_model__all_airports_data.airport HAVING count(*) > 1;",365,2,363 -7,fce38b78-5b90-4662-9c14-d93c88fe5323,3b30906a-2088-3f34-9fd3-e4d931c04ba4,ca4513fa-96e0-3a95-a1a8-7f0c127ea82a,expect_similar_means_across_reporters,price,"{'key': 'airline', 'quantity': 'price', 'id_column': 'airline', 'data_table': 'dot_model__all_flight_data', 'target_table': 'dot_model__airlines_data'}",fail,,chv_tr_different_dot_model__all_flight_data_price_distribution,,1001,1,1000 +7,fce38b78-5b90-4662-9c14-d93c88fe5323,8abccc35-874f-3e54-98eb-6eed5c00cf72,all_flight_data,expect_similar_means_across_reporters,price,"{'key': 'airline', 'quantity': 'price', 'id_column': 'airline', 'data_table': 'dot_model__all_flight_data', 'target_table': 'dot_model__airlines_data'}",fail,,chv_tr_different_dot_model__all_flight_data_price_distribution,,1001,1,1000