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---
title: "Daianna Gonzalez-Padilla"
image: "Headshot_photo_DGP-modified.png"
links:
- label: '📑 CV'
url: "https://docs.google.com/document/d/1hC01kYGW7ed04AXsWrdSaabWutE5jVGZDOc967L7sYE/edit?usp=sharing"
- label: '🌮 My Blog'
url: "https://daianna21.github.io/daianna_blog/"
- label: '`r fontawesome::fa("x-twitter", fill = "#242424")` Twitter'
url: "https://x.com/daianna_glez/"
- label: '`r fontawesome::fa("github", fill = "#080808")` GitHub'
url: "https://github.com/daianna21"
- label: '`r fontawesome::fa("linkedin", fill = "#3A5FCD")` LinkedIn'
url: "https://www.linkedin.com/in/daianna-glez/"
- label: '`r fontawesome::fa("orcid", fill = "#B3EE3A")` ORCiD'
url: "https://orcid.org/0009-0005-8348-3195"
- label: '`r fontawesome::fa("google", fill = "#7EC0EE")` Google Scholar'
url: "https://scholar.google.com/citations?user=-TacIy4AAAAJ&hl=es&oi=ao"
- label: '`r fontawesome::fa("at", fill = "#36648B")` Email'
url: "mailto:glezdaianna@gmail.com"
output:
postcards::trestles
---
## <span style="color: #030303;"> `r fontawesome::fa("user", fill = "#030303", prefer_type="solid")` About me</span>
| | |
|:------------------------------------------------------------------|
| I'm a post-baccalaureate researcher analyzing omics data to study brain function and disease, and drug response. My main interest is the development of algorithms to analyze biological data and their application to answer a wide range of biomedical questions.
---
## <span style="color: #030303;"> `r fontawesome::fa("graduation-cap", fill = "#030303")` Education</span>
<p style="color:#999999; font-size: 13px; text-align: right;"> 📍: on-site \ \| \ `r fontawesome::fa("laptop", fill = "#838B83", width= "0.95em")`: remote </p>
| | |
|:--------------------------------------------------|:----------------|
| **<span style="color: #030303;"> National Autonomous University of Mexico (UNAM), Morelos, Mexico </span>** | [2020 - 2024]{style="float:right"} |
| <span style="color: #545454;"> B.S. in Genomic Sciences ([LCG](https://www.lcg.unam.mx)) </span> | [📍🇲🇽]{style="float:right"} ||
|<br>| |
| **<span style="color: #030303;"> Tecnologico de Monterrey (ITESM), Zacatecas, Mexico </span>** | [2017 - 2020]{style="float:right"} |
| <span style="color: #545454;"> High School </span> | [📍🇲🇽]{style="float:right"} ||
---
## <span style="color: #030303;"> `r fontawesome::fa("laptop-code", fill = "#030303")` Research experience</span>
| | |
|:--------------------------------------------------|:----------------|
| **<span style="color: #030303;"> Sanger Institute, Cambridge, UK </span>** | [Sept 2024 - Present]{style="float:right"} |
| <span style="color: #545454;"> Research assistant in the [Immune Genomics group](https://www.sanger.ac.uk/group/trynka-group/) of [Dr. Gosia Trynka](https://www.sanger.ac.uk/person/trynka-gosia/). </span> | [📍🇬🇧]{style="float:right"} ||
|<br>| |
| **<span style="color: #030303;"> Lieber Institute for Brain Development (LIBD), Baltimore, MD </span>** | [Jun 2022 - Jun 2024]{style="float:right"} |
| <span style="color: #545454;"> Undergraduate researcher in the [Data Science team](https://lcolladotor.github.io) of [Dr. Leonardo Collado-Torres](http://lcolladotor.github.io/cv/en_CV_lcollado.pdf). </span> | [📍🇺🇸 \| `r fontawesome::fa("laptop", fill = "#838B83", width= "0.95em")`]{style="float:right"} ||
|<br>| |
| **<span style="color: #030303;"> Karolinska Institutet (KI), Stockholm, Sweden </span>** | [Aug - Nov 2023]{style="float:right"} |
| <span style="color: #545454;"> Undergraduate researcher in the [Personalized Medicine and Drug Development lab](https://ki.se/en/research/research-areas-centres-and-networks/research-groups/personalized-medicine-and-drug-development-lauschke-lab) of [Dr. Volker Lauschke](https://ki.se/en/people/volker-lauschke). </span> | [📍🇸🇪]{style="float:right"} ||
|<br>| |
| **<span style="color: #030303;"> Brigham and Women's Hospital (BWH), Boston, MA </span>** | [Feb - Jul 2022]{style="float:right"} |
| <span style="color: #545454;"> Intern in the [Genomics and Bioinformatics Hub](https://bioinformatics.bwh.harvard.edu) with [Dr. Xianjun Dong](http://sterding.github.io). </span> | [`r fontawesome::fa("laptop", fill = "#838B83", width= "0.95em")`]{style="float:right"} ||
|<br>| |
| **<span style="color: #030303;"> Center for Genomic Sciences (CCG), Morelos, Mexico </span>** | [Feb - Jul 2021]{style="float:right"} |
| <span style="color: #545454;"> Undergraduate researcher in the [Systems Biology lab](http://freyrelab.org/en/) of [Dr. Julio A. Freyre-Gonzalez](https://www.ccg.unam.mx/julio-augusto-freyre-gonzalez/). </span> | [📍🇲🇽 \| `r fontawesome::fa("laptop", fill = "#838B83", width= "0.95em")`]{style="float:right"} ||
---
## <span style="color: #030303;"> `r fontawesome::fa("file-lines", fill = "#030303")` Publications</span>
| | |
|:------------------------------------------------------------------|
|**[Population-scale variability of the human UDP-glycosyltransferase gene family.](https://doi.org/10.1016/j.jgg.2024.06.018)** \| **Gonzalez-Padilla, D.**, Camara, M. D., Lauschke, V. M., & Zhou, Y. (2024). ||
|<br>| |
|**[Molecular impact of nicotine and smoking exposure on the developing and adult mouse brain.](https://doi.org/10.1101/2024.11.05.622149)** \| **Gonzalez-Padilla, D.**, Eagles, N. J., Cano, M., Pertea, G., Jaffe, A. E., ..., Martinowich, K., & Collado-Torres, L. (2024). ||
|<br>| |
|**[Benchmark of cellular deconvolution methods using a multi-assay reference dataset from postmortem human prefrontal cortex.](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10888823/)** \| Huuki-Myers, L. A., Montgomery, K. D., Kwon, S. H., Cinquemani, S., Eagles, N. J., **Gonzalez-Padilla, D.**, ..., Collado-Torres, L. (2024).
|<br>| |
|**[Bioinformatics perspectives on transcriptomics: A comprehensive review of bulk and single-cell RNA sequencing analyses.](https://onlinelibrary.wiley.com/doi/10.1002/qub2.78)** \| Tzec-Interian, J. A., **Gonzalez-Padilla, D.**, & Gongora-Castillo, E. B. (2025).
---
## <span style="color: #030303;"> `r fontawesome::fa("person-chalkboard", fill = "#030303")` Presentations</span>
| | |
|:--------------------------------------------------|:----------------|
| **<span style="color: #030303;"> Annual Bioconductor Conference 2023 , Boston, MA </span>** | [Aug 2023]{style="float:right"} |
| <span style="color: #545454; margin-left:3px"> [`r fontawesome::fa("youtube", fill = "#FF0000")` ](https://www.youtube.com/watch?v=sTq6skZGgoI&list=PLdl4u5ZRDMQRVvXBi29h7MDtRn-AQGlXS) \ Presented a short talk titled **"Modeling the effects of nicotine and smoking exposures on the developing mouse brain"**. </span> | [📍🇺🇸]{style="float:right"} ||
| <span style="color: #545454; margin-left:3px"> [`r fontawesome::fa("youtube", fill = "#FF0000")` ](https://www.youtube.com/watch?v=6hJXPw9PM1o) \ Presented a long workshop titled **"A Bioconductor-style differential expression analysis powered by SPEAQeasy"**. </span> | ||
| <span style="color: #545454; margin-left:3px"> [`r fontawesome::fa("youtube", fill = "#FF0000")` ](https://www.youtube.com/watch?v=nhw_KGXZdBU) \ Presented a Birds-of-a-feather session titled **"Bioconductor and the Latin American Bioinformatics Landscape"**. </span> | ||
|<br>|
| **<span style="color: #030303;"> NIDA Genetics and Epigenetics Meeting 2024, Bethesda, MD </span>** | [Jun 2024]{style="float:right"} |
| <span style="color: #545454;"> Poster presentation titled **"Transcriptomic changes in habenula and amygdala following chronic fentanyl self-administration in rats"** \| Yalcinbas, E. & **Gonzalez-Padilla, D.** </span> | [📍🇺🇸]{style="float:right"}
|<br>|
| **<span style="color: #030303;"> PGRN Annual Meeting 2024, Columbus, OH </span>** | [Sept 2024]{style="float:right"} |
| <span style="color: #545454;"> Oral presentation titled **"Population-Scale Variability in the Human Uridine Diphosphate (UDP)-Glycosyltransferase Gene Family"**. </span> | [📍🇺🇸]{style="float:right"}
---
## <span style="color: #030303;"> `r fontawesome::fa("cog", fill = "#030303")` Software </span>
| | |
|:------------------------------------------------|:--------------------|
* [*smokingMouse*](http://research.libd.org/smokingMouse/index.html) to provide access to bulk RNA-seq data sets from [Gonzalez-Padilla et al. (2024)](https://doi.org/10.1101/2024.11.05.622149).
---
## <span style="color: #030303;"> `r fontawesome::fa("mouse-pointer", fill = "#030303")` Tutorials and teaching materials </span>
| | |
|:------------------------------------------------|:--------------------|
* [**SPEAQeasy Bioconductor Workshop 2023**](http://research.libd.org/SPEAQeasyWorkshop2023/) to demonstrate how to utilize the outputs of the RNA-seq processing pipeline *SPEAQeasy* in downstream processing and differential gene expression analysis.
* [**CSHL Statistical Analysis of Genome Scale Data course 2023**](https://lcolladotor.github.io/cshl_rstats_genome_scale_2023/) to teach bulk RNA-seq data processing and exploratory analyses in the CSHL course of 2023.
* [**CSHL Statistical Analysis of Genome Scale Data course 2024**](https://lcolladotor.github.io/cshl_rstats_genome_scale_2024/) to teach differential gene expression with *limma*-*voom* and the basics of spatial transcriptomics in the CSHL course of 2024.
---
## <span style="color: #030303;"> `r fontawesome::fa("screwdriver-wrench", fill = "#030303")` Skills </span>
| | |
|:------------------------------------------------|:--------------------|
* Programming: `r fontawesome::fa("r-project", fill = "gray")`, `r fontawesome::fa("linux", fill = "gray")`, `r fontawesome::fa("python", fill = "gray")`, C/C++, and Perl.
* Bioconductor package development `r fontawesome::fa("code-branch", fill = "#8B8970")`
* GitHub `r fontawesome::fa("github", fill = "black")`
* Compute clusters and Bash scripting `r fontawesome::fa("terminal", fill = "#8B008B", width= "0.8em")`
* Quarto websites 🌐
---
## <span style="color: #030303;"> `r fontawesome::fa("award", fill = "#030303")` Achievements </span>
| | |
|:------------------------------------------------|:--------------------|
| **<span style="color: #030303;"> National CARMA Women's Mathematics Olympiad </span>** | [Mar 2020]{style="float:right"} |
| <span style="color: #545454;"> 🥇 Gold medal </span> | [📍🇲🇽]{style="float:right"} ||
|<br>| |
| **<span style="color: #030303;"> 33rd National Mexican Mathematics Olympiad (OMM) </span>** | [Nov 2019]{style="float:right"} |
| <span style="color: #545454;"> 🗞 Honorable mention </span> | [📍🇲🇽]{style="float:right"} ||
|<br>| |
---
## <span style="color: #030303;"> Interests and Hobbies </span>
| | |
|:------------------------------------------------|:--------------------|
I love to paint <span style="font-size: 20px;"> 🎨 </span> practice yoga <span style="font-size: 20px;"> 🧘🏻♀ </span> cheese <span style="font-size: 20px;"> 🧀 </span> and dogs <span style="font-size: 20px;"> 🐩</span>.
---
Please refer to my CV for more details about my education, past research and teaching experience, presentations and courses, publications and ongoing projects. In case of questions or queries, feel free to contact me in any of my social media.
<br>
<span style="color: #7F7F7F; font-size: 14px"> Last Updated: 2024-11-07 </span>