{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":88606030,"defaultBranch":"master","name":"varity","ownerLogin":"chrovis","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2017-04-18T09:17:40.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/6347908?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1727693960.0","currentOid":""},"activityList":{"items":[{"before":"ebe8ffc31daeed1eb059403961568be24a25ada9","after":null,"ref":"refs/heads/fix/gene-annotation-index","pushedAt":"2024-09-30T10:59:20.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"k-kom","name":"koma","path":"/k-kom","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4423210?s=80&v=4"}},{"before":"bdf27c5046ec56f7db79cc4d90d8d5ca761f7e3e","after":"bef787d4a332047e6072ce0496263fc8c02e8cf8","ref":"refs/heads/master","pushedAt":"2024-09-30T10:59:16.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"k-kom","name":"koma","path":"/k-kom","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4423210?s=80&v=4"},"commit":{"message":"Merge pull request #106 from chrovis/fix/gene-annotation-index\n\nFix the dispatcher to check if an arg extends the varity.ref_gene.GeneAnnotationIndex protocol","shortMessageHtmlLink":"Merge pull request #106 from chrovis/fix/gene-annotation-index"}},{"before":null,"after":"ebe8ffc31daeed1eb059403961568be24a25ada9","ref":"refs/heads/fix/gene-annotation-index","pushedAt":"2024-09-30T07:36:41.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"federkasten","name":"Takashi AOKI","path":"/federkasten","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/644325?s=80&v=4"},"commit":{"message":"fix: fix the dispatcher to check if an arg extends the varity.ref_gene.GeneAnnotationIndex protocol","shortMessageHtmlLink":"fix: fix the dispatcher to check if an arg extends the varity.ref_gen…"}},{"before":"69ee8aae8c3262a146b9d612d6601b11e02b80f8","after":"683c8189e3bbaaf58cbbe3b6221785d7f840a959","ref":"refs/heads/fix/fix-read-seq-info-and-ter-protein-variant","pushedAt":"2024-09-10T02:37:59.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"nokara26","name":null,"path":"/nokara26","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/71314943?s=80&v=4"},"commit":{"message":"fix: add frameshift and extension conditional branch to indel and related fns","shortMessageHtmlLink":"fix: add frameshift and extension conditional branch to indel and rel…"}},{"before":null,"after":"69ee8aae8c3262a146b9d612d6601b11e02b80f8","ref":"refs/heads/fix/fix-read-seq-info-and-ter-protein-variant","pushedAt":"2024-09-10T02:17:44.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"nokara26","name":null,"path":"/nokara26","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/71314943?s=80&v=4"},"commit":{"message":"fix: add frameshift and extension conditional branch to indel and related fns","shortMessageHtmlLink":"fix: add frameshift and extension conditional branch to indel and rel…"}},{"before":"52fa2aa8ad8395cf3c8ffe6d9fb4aef9118d8f2b","after":null,"ref":"refs/heads/feature/add-utr-variant-determine-process","pushedAt":"2024-08-22T07:39:32.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"federkasten","name":"Takashi AOKI","path":"/federkasten","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/644325?s=80&v=4"}},{"before":"329fe9c03356f1ab3261a5877540c3917b52ed46","after":"bdf27c5046ec56f7db79cc4d90d8d5ca761f7e3e","ref":"refs/heads/master","pushedAt":"2024-08-22T07:39:30.000Z","pushType":"pr_merge","commitsCount":4,"pusher":{"login":"federkasten","name":"Takashi AOKI","path":"/federkasten","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/644325?s=80&v=4"},"commit":{"message":"Merge pull request #104 from chrovis/feature/add-utr-variant-determine-process\n\nadd UTR variant determine process","shortMessageHtmlLink":"Merge pull request #104 from chrovis/feature/add-utr-variant-determin…"}},{"before":"35753683f080e813c756c5857e7414c052a0273d","after":"52fa2aa8ad8395cf3c8ffe6d9fb4aef9118d8f2b","ref":"refs/heads/feature/add-utr-variant-determine-process","pushedAt":"2024-08-20T02:24:06.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"nokara26","name":null,"path":"/nokara26","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/71314943?s=80&v=4"},"commit":{"message":"test: fix indel variant ref and alt","shortMessageHtmlLink":"test: fix indel variant ref and alt"}},{"before":null,"after":"35753683f080e813c756c5857e7414c052a0273d","ref":"refs/heads/feature/add-utr-variant-determine-process","pushedAt":"2024-08-19T23:57:59.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"nokara26","name":null,"path":"/nokara26","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/71314943?s=80&v=4"},"commit":{"message":"test: fix indel variant ref and alt","shortMessageHtmlLink":"test: fix indel variant ref and alt"}},{"before":"22b40f03cc76533e5f264de040ea96a43a9d8c33","after":null,"ref":"refs/heads/fix/fix-offset-for-first-exon-variant","pushedAt":"2024-06-27T03:01:36.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"federkasten","name":"Takashi AOKI","path":"/federkasten","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/644325?s=80&v=4"}},{"before":"a0971a0714f5ba0f228c7866a4b982070a50131f","after":"329fe9c03356f1ab3261a5877540c3917b52ed46","ref":"refs/heads/master","pushedAt":"2024-06-27T03:01:35.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"federkasten","name":"Takashi AOKI","path":"/federkasten","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/644325?s=80&v=4"},"commit":{"message":"Merge pull request #103 from chrovis/fix/fix-offset-for-first-exon-variant\n\nfix: fix apply-offset for first exon variant","shortMessageHtmlLink":"Merge pull request #103 from chrovis/fix/fix-offset-for-first-exon-va…"}},{"before":"fcb2df150e2d60dfa04292f34baa312ba07c94c0","after":null,"ref":"refs/heads/fix/fix-offset-for-ini-site","pushedAt":"2024-06-27T01:26:36.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"nokara26","name":null,"path":"/nokara26","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/71314943?s=80&v=4"}},{"before":null,"after":"22b40f03cc76533e5f264de040ea96a43a9d8c33","ref":"refs/heads/fix/fix-offset-for-first-exon-variant","pushedAt":"2024-06-27T01:26:12.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"nokara26","name":null,"path":"/nokara26","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/71314943?s=80&v=4"},"commit":{"message":"fix: fix apply-offset for first exon variant","shortMessageHtmlLink":"fix: fix apply-offset for first exon variant"}},{"before":null,"after":"fcb2df150e2d60dfa04292f34baa312ba07c94c0","ref":"refs/heads/fix/fix-offset-for-ini-site","pushedAt":"2024-06-27T01:23:01.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"nokara26","name":null,"path":"/nokara26","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/71314943?s=80&v=4"},"commit":{"message":"fix: fix apply-offset for cds-start in first exon","shortMessageHtmlLink":"fix: fix apply-offset for cds-start in first exon"}},{"before":"e09551b28bbb52bf1a4cf7e0f526bb2c939d6e96","after":"a0971a0714f5ba0f228c7866a4b982070a50131f","ref":"refs/heads/master","pushedAt":"2024-06-23T10:06:37.000Z","pushType":"pr_merge","commitsCount":4,"pusher":{"login":"federkasten","name":"Takashi AOKI","path":"/federkasten","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/644325?s=80&v=4"},"commit":{"message":"Merge pull request #102 from k-kom/feature/refgeneindex-protocol\n\nIntroduce `GeneAnnotationIndex` as an abstraction of `RefGeneIndex`","shortMessageHtmlLink":"Merge pull request #102 from k-kom/feature/refgeneindex-protocol"}},{"before":"e7dda1fed2edee4e47bfcb60f7becde293d85e3f","after":null,"ref":"refs/heads/fix/add-prefer-extension-option","pushedAt":"2024-06-06T03:03:18.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"federkasten","name":"Takashi AOKI","path":"/federkasten","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/644325?s=80&v=4"}},{"before":"1a397b95f620c533c3e5d36f746b3ccb7cb47bf9","after":"e09551b28bbb52bf1a4cf7e0f526bb2c939d6e96","ref":"refs/heads/master","pushedAt":"2024-06-06T03:03:16.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"federkasten","name":"Takashi AOKI","path":"/federkasten","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/644325?s=80&v=4"},"commit":{"message":"Merge pull request #101 from chrovis/fix/add-prefer-extension-option\n\nAdd prefer-extension option for variant affects initial codon","shortMessageHtmlLink":"Merge pull request #101 from chrovis/fix/add-prefer-extension-option"}},{"before":"855a9bbe4a1d823fcf92450922f8c44dab537bd9","after":"e7dda1fed2edee4e47bfcb60f7becde293d85e3f","ref":"refs/heads/fix/add-prefer-extension-option","pushedAt":"2024-06-04T23:27:14.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"nokara26","name":null,"path":"/nokara26","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/71314943?s=80&v=4"},"commit":{"message":"fix: add prefer-extension option for variant affects initial codon","shortMessageHtmlLink":"fix: add prefer-extension option for variant affects initial codon"}},{"before":null,"after":"855a9bbe4a1d823fcf92450922f8c44dab537bd9","ref":"refs/heads/fix/add-prefer-extension-option","pushedAt":"2024-06-04T23:18:56.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"nokara26","name":null,"path":"/nokara26","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/71314943?s=80&v=4"},"commit":{"message":"fix: add prefer-extension option for variant affects initial codon","shortMessageHtmlLink":"fix: add prefer-extension option for variant affects initial codon"}},{"before":"ef428d58d348bc40852c187060cc069598ca0138","after":null,"ref":"refs/heads/fix/fix-initiation-site-codon","pushedAt":"2024-06-03T10:27:32.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"federkasten","name":"Takashi AOKI","path":"/federkasten","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/644325?s=80&v=4"}},{"before":"aece383f0601ea52dac96e3eb4529cf6c1c8fd67","after":"1a397b95f620c533c3e5d36f746b3ccb7cb47bf9","ref":"refs/heads/master","pushedAt":"2024-06-03T10:27:30.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"federkasten","name":"Takashi AOKI","path":"/federkasten","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/644325?s=80&v=4"},"commit":{"message":"Merge pull request #100 from chrovis/fix/fix-initiation-site-codon\n\nFix initiation codon in protein-frameshift and protein-extension","shortMessageHtmlLink":"Merge pull request #100 from chrovis/fix/fix-initiation-site-codon"}},{"before":null,"after":"ef428d58d348bc40852c187060cc069598ca0138","ref":"refs/heads/fix/fix-initiation-site-codon","pushedAt":"2024-06-03T03:57:53.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"nokara26","name":null,"path":"/nokara26","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/71314943?s=80&v=4"},"commit":{"message":"fix: fix initiation codon in protein-frameshift and protein-extension","shortMessageHtmlLink":"fix: fix initiation codon in protein-frameshift and protein-extension"}},{"before":"dde336c22258154a46ee87ccb789c9d77df277f4","after":null,"ref":"refs/heads/fix/fix-prot-extension","pushedAt":"2024-05-30T12:43:18.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"federkasten","name":"Takashi AOKI","path":"/federkasten","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/644325?s=80&v=4"}},{"before":"11119fb9fd3073e3c4007e1b401ac073e9a0a0dd","after":"aece383f0601ea52dac96e3eb4529cf6c1c8fd67","ref":"refs/heads/master","pushedAt":"2024-05-30T12:43:12.000Z","pushType":"pr_merge","commitsCount":3,"pusher":{"login":"federkasten","name":"Takashi AOKI","path":"/federkasten","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/644325?s=80&v=4"},"commit":{"message":"Merge pull request #99 from chrovis/fix/fix-prot-extension","shortMessageHtmlLink":"Merge pull request #99 from chrovis/fix/fix-prot-extension"}},{"before":"d3b75ca8f49b8ddcae3ae45c49ee9f46547a0c38","after":"dde336c22258154a46ee87ccb789c9d77df277f4","ref":"refs/heads/fix/fix-prot-extension","pushedAt":"2024-05-30T11:54:05.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"nokara26","name":null,"path":"/nokara26","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/71314943?s=80&v=4"},"commit":{"message":"refactor: tweak code style of first-diff-aa-is-ter-site? fn","shortMessageHtmlLink":"refactor: tweak code style of first-diff-aa-is-ter-site? fn"}},{"before":null,"after":"d3b75ca8f49b8ddcae3ae45c49ee9f46547a0c38","ref":"refs/heads/fix/fix-prot-extension","pushedAt":"2024-05-30T04:38:45.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"nokara26","name":null,"path":"/nokara26","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/71314943?s=80&v=4"},"commit":{"message":"fix: add extension conditional branch and fix protein-extension","shortMessageHtmlLink":"fix: add extension conditional branch and fix protein-extension"}},{"before":"00d767222e381ce9c3bf4327129c6c860c17f98d","after":null,"ref":"refs/heads/fix/add-no-effect-branch","pushedAt":"2024-05-20T01:46:55.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"federkasten","name":"Takashi AOKI","path":"/federkasten","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/644325?s=80&v=4"}},{"before":"25b73a4620916a92c94bbce03552fc5b8e3525e6","after":"11119fb9fd3073e3c4007e1b401ac073e9a0a0dd","ref":"refs/heads/master","pushedAt":"2024-05-20T01:46:53.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"federkasten","name":"Takashi AOKI","path":"/federkasten","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/644325?s=80&v=4"},"commit":{"message":"Merge pull request #98 from chrovis/fix/add-no-effect-branch\n\nAdd no-effect branch to protein type determine process","shortMessageHtmlLink":"Merge pull request #98 from chrovis/fix/add-no-effect-branch"}},{"before":null,"after":"00d767222e381ce9c3bf4327129c6c860c17f98d","ref":"refs/heads/fix/add-no-effect-branch","pushedAt":"2024-05-20T00:02:08.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"nokara26","name":null,"path":"/nokara26","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/71314943?s=80&v=4"},"commit":{"message":"fix: add no-effect branch","shortMessageHtmlLink":"fix: add no-effect branch"}},{"before":"73d0377023c5cb5f2560fb9798a54ab7965b9c9e","after":null,"ref":"refs/heads/feature/add-genomic-gff-reader","pushedAt":"2024-05-09T09:07:41.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"federkasten","name":"Takashi AOKI","path":"/federkasten","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/644325?s=80&v=4"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"startCursor":"Y3Vyc29yOnYyOpK7MjAyNC0wOS0zMFQxMDo1OToyMC4wMDAwMDBazwAAAATEmD56","endCursor":"Y3Vyc29yOnYyOpK7MjAyNC0wNS0wOVQwOTowNzo0MS4wMDAwMDBazwAAAARFbwoe"}},"title":"Activity · chrovis/varity"}