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bed file vs intervals coordinate system #11

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cgpu opened this issue Dec 31, 2019 · 0 comments

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cgpu commented Dec 31, 2019

https://software.broadinstitute.org/gatk/documentation/tooldocs/4.0.0.0/picard_util_BedToIntervalList.php

Note that the coordinate system of BED files is such that the first base or position in a sequence is numbered "0", while in interval_list files it is numbered "1".

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